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All interfaces > All interologs > Interface groups > group53 > 6AZ3_i_2

Interface analysis

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Protein

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

6AZ3_i
6AZ3_2
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
i:59 [ARG] 2:463 [U] 3.59 2:474 [A] 88.1
i:68 [LYS] 2:464 [G] 3.65 2:473 [C] 60.66
i:68 [LYS] 2:465 [A] 2.66 2:472 [U] 60.66
i:70 [LYS] 2:466 [C] 3.45 2:471 [U] 95.56
i:70 [LYS] 2:467 [G] 2.63 2:470 [A] base:SC 95.56
i:70 [LYS] 2:469 [G] 3.55 95.56
i:71 [ARG] 2:464 [G] 3.8 2:473 [C] 76.52
i:71 [ARG] 2:465 [A] 2.56 2:472 [U] base:SC 76.52
i:74 [LYS] 2:465 [A] 3.76 2:472 [U] 88.88
i:74 [LYS] 2:466 [C] 4.27 2:471 [U] 88.88
i:74 [LYS] 2:467 [G] 3.24 2:470 [A] 88.88
i:75 [TYR] 2:463 [U] 4.99 2:474 [A] 51.27
i:77 [LYS] 2:469 [G] 4.1 93.61
i:77 [LYS] 2:470 [A] 3.8 2:467 [G] 93.61
i:78 [LYS] 2:461 [C] 4.87 2:476 [C] 73.88
i:78 [LYS] 2:462 [G] 3.06 2:475 [C] 73.88
i:83 [PHE] 2:468 [A] 4.93 79.74
i:83 [PHE] 2:469 [G] 3.79 79.74

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group53 6AZ3_i_2 i: 60s ribosomal protein l36, putative, Leishmania donovani (natural) 2: rRNA beta, Leishmania donovani (natural) A0A3Q8IDW6 60S ribosomal protein rpL36 (L36e) Eukaryotic large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_i_2 7O7Y_Bi_B5 0.91 0.91 0.65 0.6 60S ribosomal protein rpL36 (L36e) Eukaryotic large subunit ribosomal RNA compare