RNAprotDB

Contacts -

6AZ3_k	6AZ3_1	Distance	Base Pair	Hbond nuc:res	Base Stacking	Residue conservation
k:2 [PRO]	1:1769 [A]	3.34	1:1747 [C]			93.5
k:2 [PRO]	1:1770 [A]	3.42	1:1633 [U]			93.5
k:3 [ARG]	1:1771 [A]	4.09	1:1632 [U]			53.0
k:21 [ARG]	1:1764 [A]	3.61			base/AA stacks	21.0
k:21 [ARG]	1:1765 [A]	4.82				21.0
k:21 [ARG]	1:1766 [A]	3.35				21.0
k:22 [CYS]	1:1765 [A]	4.33				55.1
k:24 [LYS]	1:1765 [A]	3.93				52.2
k:24 [LYS]	1:1766 [A]	4.39				52.2
k:24 [LYS]	1:1768 [G]	3.41	1:1748 [C]			52.2
k:24 [LYS]	1:1769 [A]	4.24	1:1747 [C]			52.2
k:37 [ARG]	1:1766 [A]	4.99				98.6
k:37 [ARG]	1:1768 [G]	4.92	1:1748 [C]			98.6
k:37 [ARG]	1:1769 [A]	3.13	1:1747 [C]			98.6
k:37 [ARG]	1:1770 [A]	3.32	1:1633 [U]			98.6
k:40 [ARG]	1:1770 [A]	3.78	1:1633 [U]			74.3
k:40 [ARG]	1:1771 [A]	3.52	1:1632 [U]			74.3
k:40 [ARG]	1:1772 [U]	3.34	2:12 [G]			74.3
k:41 [TYR]	1:1770 [A]	3.28	1:1633 [U]			56.9
k:41 [TYR]	1:1771 [A]	3.42	1:1632 [U]			56.9
k:42 [LEU]	1:1769 [A]	3.78	1:1747 [C]			92.5
k:42 [LEU]	1:1770 [A]	2.72	1:1633 [U]			92.5
k:65 [LYS]	1:1764 [A]	3.45				4.2
k:65 [LYS]	1:1765 [A]	2.41				4.2
k:67 [ILE]	1:1765 [A]	3.23				1.1
k:68 [ALA]	1:1765 [A]	3.35				0.0
k:69 [VAL]	1:1765 [A]	3.71				68.6
k:70 [THR]	1:1765 [A]	3.37		base:SC, base:BB		8.8
k:72 [ARG]	1:1765 [A]	3.2		sugar:SC	base/AA stacks	30.8
k:72 [ARG]	1:1767 [A]	2.93	1:1749 [U]			30.8
k:72 [ARG]	1:1768 [G]	2.69	1:1748 [C]			30.8
k:74 [HIS]	1:1751 [G]	4.36	1:1761 [C]			30.8
k:74 [HIS]	1:1752 [G]	3.52			base/AA stacks	30.8
k:75 [ALA]	1:1752 [G]	3.63				64.1
k:76 [LYS]	1:1767 [A]	4.1	1:1749 [U]			61.3
k:77 [THR]	1:1752 [G]	4.14				55.1
k:77 [THR]	1:1753 [A]	2.33	1:1758 [A]			55.1

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

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