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All interfaces > All interologs > Interface groups > group56 > 7O7Y_BT_B7

Interface analysis

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Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Interface

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Rim - Core

Contacts -

7O7Y_BT
7O7Y_B7
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
BT:20 [ARG] B7:11 [A] 3.25 83.9
BT:20 [ARG] B7:67 [C] 3.1 B7:108 [G] 83.9
BT:20 [ARG] B7:68 [C] 3.43 B7:107 [G] 83.9
BT:21 [LYS] B7:10 [C] 4.7 54.4
BT:26 [PRO] B7:9 [C] 3.09 B7:110 [G] 40.3
BT:26 [PRO] B7:10 [C] 3.56 40.3
BT:27 [LEU] B7:8 [G] 3.48 B7:111 [C] 50.0
BT:27 [LEU] B7:9 [C] 3.36 B7:110 [G] 50.0
BT:28 [ALA] B7:8 [G] 3.63 B7:111 [C] 77.9
BT:28 [ALA] B7:9 [C] 2.94 B7:110 [G] 77.9
BT:29 [THR] B7:9 [C] 4.69 B7:110 [G] 70.3
BT:31 [MET] B7:8 [G] 4.63 B7:111 [C] 67.8

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group56 7O7Y_BT_B7 BT: El21, Oryctolagus cuniculus (natural) B7: 5s rRNA, Oryctolagus cuniculus (natural) G1SHQ2 SH3 5S ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_Q_9 7O7Y_BT_B7 0.80 0.9 1.8 0.4 SH3 5S ribosomal RNA compare
1VQ8_Q_9 7O7Y_BT_B7 0.82 0.9 1.86 0.4 SH3 5S ribosomal RNA compare
6AZ3_S_8 7O7Y_BT_B7 0.93 0.92 0.9 0.5 SH3 5S ribosomal RNA compare