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All interfaces > All interologs > Interface groups > group57 > 1VQ8_W_9 vs 6AZ3_c_8

Interface analysis


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Common contacts -

1VQ8_W
1VQ8_9
6AZ3_c
6AZ3_8
Conserved?
W:130 [HIS] 9:3086 [G] c:229 [ARG] 8:85 [G] ✔
W:130 [HIS] 9:3088 [G] c:229 [ARG] 8:87 [C] ✔
W:46 [ALA] 9:3099 [U] c:138 [ARG] 8:98 [C] ✔
W:46 [ALA] 9:3100 [G] c:138 [ARG] 8:99 [G] ✔
W:129 [LYS] 9:3086 [G] c:228 [ARG] 8:85 [G] ✔
W:129 [LYS] 9:3087 [U] c:228 [ARG] 8:86 [U] ✔
W:129 [LYS] 9:3088 [G] c:228 [ARG] 8:87 [C] ✔
W:50 [ASP] 9:3084 [G] c:142 [PRO] 8:83 [A] ✔
W:50 [ASP] 9:3085 [A] c:142 [PRO] 8:84 [G] ✔
W:134 [GLU] 9:3097 [U] c:233 [GLU] 8:96 [C] ✔
W:134 [GLU] 9:3098 [C] c:233 [GLU] 8:97 [U] ✔
W:133 [LYS] 9:3098 [C] c:232 [VAL] 8:97 [U] ✔
W:133 [LYS] 9:3099 [U] c:232 [VAL] 8:98 [C] ✔
W:131 [PRO] 9:3098 [C] c:230 [HIS] 8:97 [U] ✔
W:138 [LEU] 9:3085 [A] c:237 [TYR] 8:84 [G] ✔
W:49 [ASN] 9:3099 [U] c:141 [GLU] 8:98 [C] ✔
W:14 [HIS] 9:3085 [A] c:106 [ASN] 8:84 [G] ✔
W:130 [HIS] 9:3087 [U] c:229 [ARG] 8:86 [U] ❌ 6AZ3_c_8
W:50 [ASP] 9:3098 [C] c:142 [PRO] 8:97 [U] ❌ 6AZ3_c_8
W:14 [HIS] 9:3084 [G] c:106 [ASN] 8:83 [A] ❌ 6AZ3_c_8
W:129 [LYS] 9:3085 [A] c:228 [ARG] 8:84 [G] ❌ 1VQ8_W_9
W:130 [HIS] 9:3097 [U] c:229 [ARG] 8:96 [C] ❌ 1VQ8_W_9
W:130 [HIS] 9:3085 [A] c:229 [ARG] 8:84 [G] ❌ 1VQ8_W_9
W:131 [PRO] 9:3099 [U] c:230 [HIS] 8:98 [C] ❌ 1VQ8_W_9
W:134 [GLU] 9:3085 [A] c:233 [GLU] 8:84 [G] ❌ 1VQ8_W_9
W:134 [GLU] 9:3086 [G] c:233 [GLU] 8:85 [G] ❌ 1VQ8_W_9
W:46 [ALA] 9:3083 [G] c:138 [ARG] 8:82 [G] ❌ 6AZ3_8:82 no longer at interface
W:51 [PHE] 9:3084 [G] c:143 [TYR] 8:83 [A] ❌ 6AZ3_c:143 no longer at interface
W:51 [PHE] 9:3085 [A] c:143 [TYR] 8:84 [G] ❌ 6AZ3_c:143 no longer at interface
W:8 [ARG] 9:3085 [A] c:100 [ARG] 8:84 [G] ❌ 6AZ3_c:100 no longer at interface
W:8 [ARG] 9:3086 [G] c:100 [ARG] 8:85 [G] ❌ 6AZ3_c:100 no longer at interface
W:17 [ILE] 9:3084 [G] c:109 [GLN] 8:83 [A] ❌ 6AZ3_c:109 no longer at interface
W:47 [LYS] 9:3084 [G] c:139 [ALA] 8:83 [A] ❌ 6AZ3_c:139 no longer at interface
W:128 [VAL] 9:3086 [G] c:227 [LYS] 8:85 [G] ❌ 6AZ3_c:227 no longer at interface
W:127 [GLY] 9:3088 [G] c:226 [GLN] 8:87 [C] ❌ 1VQ8_W:127 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L30p/L7e 5S ribosomal RNA 0.85 1.01 0.09 0.86 0.82 0.91 1.0 0.72 0.62 0.15 0.50


Other pairs involving 1VQ8_W_9 or 6AZ3_c_8

Total number of entries: 5

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_W_9 1YHQ_W_9 0.99 1.0 0.11 1.0 Ribosomal protein L30p/L7e 5S ribosomal RNA compare
1VQ8_W_9 6AZ3_c_8 0.72 0.85 1.01 0.09 Ribosomal protein L30p/L7e 5S ribosomal RNA compare
1VQ8_W_9 7O7Y_BF_B7 0.74 0.85 1.15 0.18 Ribosomal protein L30p/L7e 5S ribosomal RNA compare
1YHQ_W_9 6AZ3_c_8 0.72 0.85 1.04 0.09 Ribosomal protein L30p/L7e 5S ribosomal RNA compare
6AZ3_c_8 7O7Y_BF_B7 0.90 0.95 0.44 0.44 Ribosomal protein L30p/L7e 5S ribosomal RNA compare