Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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Focus on
InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
1VQ8_Y
|
1VQ8_0
|
1YHQ_Y
|
1YHQ_0
|
Conserved?
|
---|---|---|---|---|
Y:204 [ARG] | 0:552 [A] | Y:204 [ARG] | 0:552 [A] | ✔ |
Y:204 [ARG] | 0:553 [G] | Y:204 [ARG] | 0:553 [G] | ✔ |
Y:204 [ARG] | 0:1324 [G] | Y:204 [ARG] | 0:1324 [G] | ✔ |
Y:204 [ARG] | 0:1333 [U] | Y:204 [ARG] | 0:1333 [U] | ✔ |
Y:204 [ARG] | 0:1334 [C] | Y:204 [ARG] | 0:1334 [C] | ✔ |
Y:208 [LYS] | 0:1311 [G] | Y:208 [LYS] | 0:1311 [G] | ✔ |
Y:208 [LYS] | 0:1312 [G] | Y:208 [LYS] | 0:1312 [G] | ✔ |
Y:208 [LYS] | 0:1313 [A] | Y:208 [LYS] | 0:1313 [A] | ✔ |
Y:208 [LYS] | 0:1317 [A] | Y:208 [LYS] | 0:1317 [A] | ✔ |
Y:208 [LYS] | 0:1318 [A] | Y:208 [LYS] | 0:1318 [A] | ✔ |
Y:208 [LYS] | 0:1334 [C] | Y:208 [LYS] | 0:1334 [C] | ✔ |
Y:208 [LYS] | 0:1343 [C] | Y:208 [LYS] | 0:1343 [C] | ✔ |
Y:208 [LYS] | 0:1344 [G] | Y:208 [LYS] | 0:1344 [G] | ✔ |
Y:184 [GLU] | 0:553 [G] | Y:184 [GLU] | 0:553 [G] | ✔ |
Y:184 [GLU] | 0:1325 [G] | Y:184 [GLU] | 0:1325 [G] | ✔ |
Y:176 [GLY] | 0:1326 [U] | Y:176 [GLY] | 0:1326 [C] | ✔ |
Y:176 [GLY] | 0:1327 [G] | Y:176 [GLY] | 0:1327 [G] | ✔ |
Y:155 [ARG] | 0:628 [1MA] | Y:155 [ARG] | 0:628 [1MA] | ✔ |
Y:155 [ARG] | 0:1072 [G] | Y:155 [ARG] | 0:1072 [G] | ✔ |
Y:155 [ARG] | 0:1073 [A] | Y:155 [ARG] | 0:1073 [A] | ✔ |
Y:155 [ARG] | 0:1088 [A] | Y:155 [ARG] | 0:1088 [A] | ✔ |
Y:180 [SER] | 0:554 [G] | Y:180 [SER] | 0:554 [G] | ✔ |
Y:180 [SER] | 0:555 [U] | Y:180 [SER] | 0:555 [U] | ✔ |
Y:227 [ARG] | 0:554 [G] | Y:227 [ARG] | 0:554 [G] | ✔ |
Y:159 [GLY] | 0:539 [G] | Y:159 [GLY] | 0:539 [G] | ✔ |
Y:159 [GLY] | 0:540 [A] | Y:159 [GLY] | 0:540 [A] | ✔ |
Y:159 [GLY] | 0:617 [C] | Y:159 [GLY] | 0:617 [C] | ✔ |
Y:142 [SER] | 0:1330 [A] | Y:142 [SER] | 0:1330 [A] | ✔ |
Y:142 [SER] | 0:1331 [A] | Y:142 [SER] | 0:1331 [G] | ✔ |
Y:154 [ARG] | 0:1071 [G] | Y:154 [ARG] | 0:1071 [G] | ✔ |
Y:154 [ARG] | 0:1072 [G] | Y:154 [ARG] | 0:1072 [G] | ✔ |
Y:154 [ARG] | 0:1292 [G] | Y:154 [ARG] | 0:1292 [G] | ✔ |
Y:154 [ARG] | 0:1293 [U] | Y:154 [ARG] | 0:1293 [U] | ✔ |
Y:189 [ASN] | 0:1311 [G] | Y:189 [ASN] | 0:1311 [G] | ✔ |
Y:189 [ASN] | 0:1312 [G] | Y:189 [ASN] | 0:1312 [G] | ✔ |
Y:206 [ALA] | 0:1334 [C] | Y:206 [ALA] | 0:1334 [C] | ✔ |
Y:150 [LEU] | 0:621 [C] | Y:150 [LEU] | 0:621 [C] | ✔ |
Y:150 [LEU] | 0:622 [G] | Y:150 [LEU] | 0:622 [G] | ✔ |
Y:150 [LEU] | 0:623 [U] | Y:150 [LEU] | 0:623 [U] | ✔ |
Y:150 [LEU] | 0:624 [U] | Y:150 [LEU] | 0:624 [U] | ✔ |
Y:150 [LEU] | 0:625 [U] | Y:150 [LEU] | 0:625 [U] | ✔ |
Y:150 [LEU] | 0:628 [1MA] | Y:150 [LEU] | 0:628 [1MA] | ✔ |
Y:150 [LEU] | 0:629 [A] | Y:150 [LEU] | 0:629 [A] | ✔ |
Y:150 [LEU] | 0:1071 [G] | Y:150 [LEU] | 0:1071 [G] | ✔ |
Y:138 [ARG] | 0:635 [A] | Y:138 [ARG] | 0:635 [A] | ✔ |
Y:138 [ARG] | 0:637 [C] | Y:138 [ARG] | 0:637 [C] | ✔ |
Y:138 [ARG] | 0:638 [C] | Y:138 [ARG] | 0:638 [C] | ✔ |
Y:138 [ARG] | 0:639 [A] | Y:138 [ARG] | 0:639 [A] | ✔ |
Y:138 [ARG] | 0:1356 [A] | Y:138 [ARG] | 0:1356 [A] | ✔ |
Y:143 [TRP] | 0:905 [C] | Y:143 [TRP] | 0:905 [C] | ✔ |
Y:143 [TRP] | 0:906 [C] | Y:143 [TRP] | 0:906 [C] | ✔ |
Y:143 [TRP] | 0:907 [A] | Y:143 [TRP] | 0:907 [A] | ✔ |
Y:143 [TRP] | 0:1329 [A] | Y:143 [TRP] | 0:1329 [G] | ✔ |
Y:143 [TRP] | 0:1330 [A] | Y:143 [TRP] | 0:1330 [A] | ✔ |
Y:126 [PRO] | 0:540 [A] | Y:126 [PRO] | 0:540 [A] | ✔ |
Y:126 [PRO] | 0:541 [C] | Y:126 [PRO] | 0:541 [C] | ✔ |
Y:126 [PRO] | 0:1329 [A] | Y:126 [PRO] | 0:1329 [G] | ✔ |
Y:139 [VAL] | 0:1356 [A] | Y:139 [VAL] | 0:1356 [A] | ✔ |
Y:146 [PRO] | 0:622 [G] | Y:146 [PRO] | 0:622 [G] | ✔ |
Y:161 [GLY] | 0:540 [A] | Y:161 [GLY] | 0:540 [A] | ✔ |
Y:233 [TYR] | 0:551 [A] | Y:233 [TYR] | 0:551 [A] | ✔ |
Y:233 [TYR] | 0:552 [A] | Y:233 [TYR] | 0:552 [A] | ✔ |
Y:157 [ILE] | 0:618 [G] | Y:157 [ILE] | 0:618 [G] | ✔ |
Y:157 [ILE] | 0:1073 [A] | Y:157 [ILE] | 0:1073 [A] | ✔ |
Y:157 [ILE] | 0:1074 [G] | Y:157 [ILE] | 0:1074 [G] | ✔ |
Y:230 [ASN] | 0:552 [A] | Y:230 [ASN] | 0:552 [A] | ✔ |
Y:230 [ASN] | 0:1334 [C] | Y:230 [ASN] | 0:1334 [C] | ✔ |
Y:230 [ASN] | 0:1335 [C] | Y:230 [ASN] | 0:1335 [C] | ✔ |
Y:136 [LYS] | 0:636 [G] | Y:136 [LYS] | 0:636 [G] | ✔ |
Y:136 [LYS] | 0:637 [C] | Y:136 [LYS] | 0:637 [C] | ✔ |
Y:136 [LYS] | 0:638 [C] | Y:136 [LYS] | 0:638 [C] | ✔ |
Y:136 [LYS] | 0:1356 [A] | Y:136 [LYS] | 0:1356 [A] | ✔ |
Y:136 [LYS] | 0:2059 [U] | Y:136 [LYS] | 0:2059 [U] | ✔ |
Y:136 [LYS] | 0:2060 [A] | Y:136 [LYS] | 0:2060 [A] | ✔ |
Y:132 [ASP] | 0:620 [A] | Y:132 [ASP] | 0:620 [A] | ✔ |
Y:132 [ASP] | 0:621 [C] | Y:132 [ASP] | 0:621 [C] | ✔ |
Y:132 [ASP] | 0:1356 [A] | Y:132 [ASP] | 0:1356 [A] | ✔ |
Y:215 [GLU] | 0:1315 [G] | Y:215 [GLU] | 0:1315 [G] | ✔ |
Y:210 [GLY] | 0:1312 [G] | Y:210 [GLY] | 0:1312 [G] | ✔ |
Y:210 [GLY] | 0:1313 [A] | Y:210 [GLY] | 0:1313 [A] | ✔ |
Y:210 [GLY] | 0:1314 [U] | Y:210 [GLY] | 0:1314 [U] | ✔ |
Y:210 [GLY] | 0:1315 [G] | Y:210 [GLY] | 0:1315 [G] | ✔ |
Y:210 [GLY] | 0:1316 [G] | Y:210 [GLY] | 0:1316 [G] | ✔ |
Y:172 [THR] | 0:1267 [C] | Y:172 [THR] | 0:1267 [C] | ✔ |
Y:172 [THR] | 0:1268 [C] | Y:172 [THR] | 0:1268 [C] | ✔ |
Y:172 [THR] | 0:1269 [G] | Y:172 [THR] | 0:1269 [G] | ✔ |
Y:229 [LEU] | 0:552 [A] | Y:229 [LEU] | 0:552 [A] | ✔ |
Y:229 [LEU] | 0:553 [G] | Y:229 [LEU] | 0:553 [G] | ✔ |
Y:115 [ARG] | 0:1266 [U] | Y:115 [ARG] | 0:1266 [U] | ✔ |
Y:115 [ARG] | 0:1267 [C] | Y:115 [ARG] | 0:1267 [C] | ✔ |
Y:153 [GLN] | 0:621 [C] | Y:153 [GLN] | 0:621 [C] | ✔ |
Y:152 [LYS] | 0:620 [A] | Y:152 [LYS] | 0:620 [A] | ✔ |
Y:152 [LYS] | 0:621 [C] | Y:152 [LYS] | 0:621 [C] | ✔ |
Y:152 [LYS] | 0:629 [A] | Y:152 [LYS] | 0:629 [A] | ✔ |
Y:121 [HIS] | 0:555 [U] | Y:121 [HIS] | 0:555 [U] | ✔ |
Y:121 [HIS] | 0:556 [C] | Y:121 [HIS] | 0:556 [C] | ✔ |
Y:231 [PRO] | 0:552 [A] | Y:231 [PRO] | 0:552 [A] | ✔ |
Y:148 [GLY] | 0:622 [G] | Y:148 [GLY] | 0:622 [G] | ✔ |
Y:148 [GLY] | 0:623 [U] | Y:148 [GLY] | 0:623 [U] | ✔ |
Y:123 [VAL] | 0:1090 [A] | Y:123 [VAL] | 0:1090 [A] | ✔ |
Y:123 [VAL] | 0:1091 [U] | Y:123 [VAL] | 0:1091 [U] | ✔ |
Y:179 [PRO] | 0:553 [G] | Y:179 [PRO] | 0:553 [G] | ✔ |
Y:179 [PRO] | 0:554 [G] | Y:179 [PRO] | 0:554 [G] | ✔ |
Y:179 [PRO] | 0:555 [U] | Y:179 [PRO] | 0:555 [U] | ✔ |
Y:179 [PRO] | 0:1325 [G] | Y:179 [PRO] | 0:1325 [G] | ✔ |
Y:179 [PRO] | 0:1326 [U] | Y:179 [PRO] | 0:1326 [C] | ✔ |
Y:145 [LYS] | 0:906 [C] | Y:145 [LYS] | 0:906 [C] | ✔ |
Y:145 [LYS] | 0:907 [A] | Y:145 [LYS] | 0:907 [A] | ✔ |
Y:122 [ARG] | 0:594 [C] | Y:122 [ARG] | 0:594 [C] | ✔ |
Y:122 [ARG] | 0:595 [U] | Y:122 [ARG] | 0:595 [U] | ✔ |
Y:166 [ALA] | 0:907 [A] | Y:166 [ALA] | 0:907 [A] | ✔ |
Y:166 [ALA] | 0:908 [A] | Y:166 [ALA] | 0:908 [A] | ✔ |
Y:166 [ALA] | 0:1268 [C] | Y:166 [ALA] | 0:1268 [C] | ✔ |
Y:166 [ALA] | 0:1269 [G] | Y:166 [ALA] | 0:1269 [G] | ✔ |
Y:166 [ALA] | 0:1328 [A] | Y:166 [ALA] | 0:1328 [A] | ✔ |
Y:164 [VAL] | 0:906 [C] | Y:164 [VAL] | 0:906 [C] | ✔ |
Y:164 [VAL] | 0:907 [A] | Y:164 [VAL] | 0:907 [A] | ✔ |
Y:164 [VAL] | 0:908 [A] | Y:164 [VAL] | 0:908 [A] | ✔ |
Y:164 [VAL] | 0:1328 [A] | Y:164 [VAL] | 0:1328 [A] | ✔ |
Y:164 [VAL] | 0:1329 [A] | Y:164 [VAL] | 0:1329 [G] | ✔ |
Y:170 [SER] | 0:1267 [C] | Y:170 [SER] | 0:1267 [C] | ✔ |
Y:170 [SER] | 0:1268 [C] | Y:170 [SER] | 0:1268 [C] | ✔ |
Y:170 [SER] | 0:1327 [G] | Y:170 [SER] | 0:1327 [G] | ✔ |
Y:170 [SER] | 0:1328 [A] | Y:170 [SER] | 0:1328 [A] | ✔ |
Y:207 [SER] | 0:1317 [A] | Y:207 [SER] | 0:1317 [A] | ✔ |
Y:207 [SER] | 0:1334 [C] | Y:207 [SER] | 0:1334 [C] | ✔ |
Y:207 [SER] | 0:1335 [C] | Y:207 [SER] | 0:1335 [C] | ✔ |
Y:175 [ARG] | 0:1268 [C] | Y:175 [ARG] | 0:1268 [C] | ✔ |
Y:175 [ARG] | 0:1269 [G] | Y:175 [ARG] | 0:1269 [G] | ✔ |
Y:175 [ARG] | 0:1326 [U] | Y:175 [ARG] | 0:1326 [C] | ✔ |
Y:175 [ARG] | 0:1327 [G] | Y:175 [ARG] | 0:1327 [G] | ✔ |
Y:175 [ARG] | 0:1328 [A] | Y:175 [ARG] | 0:1328 [A] | ✔ |
Y:125 [LYS] | 0:541 [C] | Y:125 [LYS] | 0:541 [C] | ✔ |
Y:125 [LYS] | 0:1327 [G] | Y:125 [LYS] | 0:1327 [G] | ✔ |
Y:125 [LYS] | 0:1328 [A] | Y:125 [LYS] | 0:1328 [A] | ✔ |
Y:125 [LYS] | 0:1329 [A] | Y:125 [LYS] | 0:1329 [G] | ✔ |
Y:165 [GLU] | 0:907 [A] | Y:165 [GLU] | 0:907 [A] | ✔ |
Y:165 [GLU] | 0:908 [A] | Y:165 [GLU] | 0:908 [A] | ✔ |
Y:165 [GLU] | 0:1089 [G] | Y:165 [GLU] | 0:1089 [G] | ✔ |
Y:165 [GLU] | 0:1090 [A] | Y:165 [GLU] | 0:1090 [A] | ✔ |
Y:165 [GLU] | 0:1328 [A] | Y:165 [GLU] | 0:1328 [A] | ✔ |
Y:213 [LYS] | 0:1312 [G] | Y:213 [LYS] | 0:1312 [G] | ✔ |
Y:213 [LYS] | 0:1313 [A] | Y:213 [LYS] | 0:1313 [A] | ✔ |
Y:156 [GLY] | 0:1073 [A] | Y:156 [GLY] | 0:1073 [A] | ✔ |
Y:156 [GLY] | 0:1074 [G] | Y:156 [GLY] | 0:1074 [G] | ✔ |
Y:156 [GLY] | 0:1260 [G] | Y:156 [GLY] | 0:1260 [G] | ✔ |
Y:174 [VAL] | 0:1327 [G] | Y:174 [VAL] | 0:1327 [G] | ✔ |
Y:147 [ARG] | 0:622 [G] | Y:147 [ARG] | 0:622 [G] | ✔ |
Y:147 [ARG] | 0:623 [U] | Y:147 [ARG] | 0:623 [U] | ✔ |
Y:147 [ARG] | 0:906 [C] | Y:147 [ARG] | 0:906 [C] | ✔ |
Y:167 [GLY] | 0:1089 [G] | Y:167 [GLY] | 0:1089 [G] | ✔ |
Y:167 [GLY] | 0:1090 [A] | Y:167 [GLY] | 0:1090 [A] | ✔ |
Y:167 [GLY] | 0:1268 [C] | Y:167 [GLY] | 0:1268 [C] | ✔ |
Y:167 [GLY] | 0:1269 [G] | Y:167 [GLY] | 0:1269 [G] | ✔ |
Y:167 [GLY] | 0:1290 [G] | Y:167 [GLY] | 0:1290 [G] | ✔ |
Y:186 [ARG] | 0:1333 [U] | Y:186 [ARG] | 0:1333 [U] | ✔ |
Y:186 [ARG] | 0:1334 [C] | Y:186 [ARG] | 0:1334 [C] | ✔ |
Y:128 [PHE] | 0:1328 [A] | Y:128 [PHE] | 0:1328 [A] | ✔ |
Y:128 [PHE] | 0:1329 [A] | Y:128 [PHE] | 0:1329 [G] | ✔ |
Y:120 [ARG] | 0:1326 [U] | Y:120 [ARG] | 0:1326 [C] | ✔ |
Y:120 [ARG] | 0:1327 [G] | Y:120 [ARG] | 0:1327 [G] | ✔ |
Y:141 [THR] | 0:1330 [A] | Y:141 [THR] | 0:1330 [A] | ✔ |
Y:209 [VAL] | 0:1312 [G] | Y:209 [VAL] | 0:1312 [G] | ✔ |
Y:209 [VAL] | 0:1313 [A] | Y:209 [VAL] | 0:1313 [A] | ✔ |
Y:178 [HIS] | 0:553 [G] | Y:178 [HIS] | 0:553 [G] | ✔ |
Y:178 [HIS] | 0:554 [G] | Y:178 [HIS] | 0:554 [G] | ✔ |
Y:178 [HIS] | 0:1325 [G] | Y:178 [HIS] | 0:1325 [G] | ✔ |
Y:178 [HIS] | 0:1326 [U] | Y:178 [HIS] | 0:1326 [C] | ✔ |
Y:133 [HIS] | 0:540 [A] | Y:133 [HIS] | 0:540 [A] | ✔ |
Y:135 [LYS] | 0:537 [G] | Y:135 [LYS] | 0:537 [G] | ✔ |
Y:135 [LYS] | 0:538 [C] | Y:135 [LYS] | 0:538 [C] | ✔ |
Y:135 [LYS] | 0:620 [A] | Y:135 [LYS] | 0:620 [A] | ✔ |
Y:171 [PRO] | 0:1267 [C] | Y:171 [PRO] | 0:1267 [C] | ✔ |
Y:171 [PRO] | 0:1268 [C] | Y:171 [PRO] | 0:1268 [C] | ✔ |
Y:169 [ARG] | 0:1267 [C] | Y:169 [ARG] | 0:1267 [C] | ✔ |
Y:169 [ARG] | 0:1268 [C] | Y:169 [ARG] | 0:1268 [C] | ✔ |
Y:169 [ARG] | 0:1269 [G] | Y:169 [ARG] | 0:1269 [G] | ✔ |
Y:169 [ARG] | 0:1327 [G] | Y:169 [ARG] | 0:1327 [G] | ✔ |
Y:169 [ARG] | 0:1328 [A] | Y:169 [ARG] | 0:1328 [A] | ✔ |
Y:169 [ARG] | 0:1329 [A] | Y:169 [ARG] | 0:1329 [G] | ✔ |
Y:211 [ALA] | 0:1314 [U] | Y:211 [ALA] | 0:1314 [U] | ✔ |
Y:211 [ALA] | 0:1315 [G] | Y:211 [ALA] | 0:1315 [G] | ✔ |
Y:211 [ALA] | 0:1316 [G] | Y:211 [ALA] | 0:1316 [G] | ✔ |
Y:162 [ASP] | 0:540 [A] | Y:162 [ASP] | 0:540 [A] | ✔ |
Y:162 [ASP] | 0:541 [C] | Y:162 [ASP] | 0:541 [C] | ✔ |
Y:162 [ASP] | 0:1091 [U] | Y:162 [ASP] | 0:1091 [U] | ✔ |
Y:119 [GLN] | 0:1266 [U] | Y:119 [GLN] | 0:1266 [U] | ✔ |
Y:119 [GLN] | 0:1267 [C] | Y:119 [GLN] | 0:1267 [C] | ✔ |
Y:168 [PHE] | 0:1089 [G] | Y:168 [PHE] | 0:1089 [G] | ✔ |
Y:168 [PHE] | 0:1090 [A] | Y:168 [PHE] | 0:1090 [A] | ✔ |
Y:168 [PHE] | 0:1091 [U] | Y:168 [PHE] | 0:1091 [U] | ✔ |
Y:168 [PHE] | 0:1328 [A] | Y:168 [PHE] | 0:1328 [A] | ✔ |
Y:127 [GLN] | 0:540 [A] | Y:127 [GLN] | 0:540 [A] | ✔ |
Y:127 [GLN] | 0:541 [C] | Y:127 [GLN] | 0:541 [C] | ✔ |
Y:127 [GLN] | 0:1329 [A] | Y:127 [GLN] | 0:1329 [G] | ✔ |
Y:131 [GLN] | 0:621 [C] | Y:131 [GLN] | 0:621 [C] | ✔ |
Y:131 [GLN] | 0:622 [G] | Y:131 [GLN] | 0:622 [G] | ✔ |
Y:131 [GLN] | 0:1356 [A] | Y:131 [GLN] | 0:1356 [A] | ✔ |
Y:130 [ARG] | 0:905 [C] | Y:130 [ARG] | 0:905 [C] | ✔ |
Y:130 [ARG] | 0:1356 [A] | Y:130 [ARG] | 0:1356 [A] | ✔ |
Y:130 [ARG] | 0:1357 [A] | Y:130 [ARG] | 0:1357 [A] | ✔ |
Y:214 [ARG] | 0:1335 [C] | Y:214 [ARG] | 0:1335 [C] | ✔ |
Y:158 [LYS] | 0:539 [G] | Y:158 [LYS] | 0:539 [G] | ✔ |
Y:158 [LYS] | 0:616 [U] | Y:158 [LYS] | 0:616 [U] | ✔ |
Y:158 [LYS] | 0:617 [C] | Y:158 [LYS] | 0:617 [C] | ✔ |
Y:158 [LYS] | 0:618 [G] | Y:158 [LYS] | 0:618 [G] | ✔ |
Y:158 [LYS] | 0:1073 [A] | Y:158 [LYS] | 0:1073 [A] | ✔ |
Y:158 [LYS] | 0:1074 [G] | Y:158 [LYS] | 0:1074 [G] | ✔ |
Y:158 [LYS] | 0:1075 [G] | Y:158 [LYS] | 0:1075 [G] | ✔ |
Y:158 [LYS] | 0:1260 [G] | Y:158 [LYS] | 0:1260 [G] | ✔ |
Y:151 [SER] | 0:621 [C] | Y:151 [SER] | 0:621 [C] | ✔ |
Y:151 [SER] | 0:622 [G] | Y:151 [SER] | 0:622 [G] | ✔ |
Y:137 [LYS] | 0:16 [A] | Y:137 [LYS] | 0:16 [A] | ✔ |
Y:137 [LYS] | 0:521 [A] | Y:137 [LYS] | 0:521 [A] | ✔ |
Y:137 [LYS] | 0:522 [U] | Y:137 [LYS] | 0:522 [U] | ✔ |
Y:137 [LYS] | 0:638 [C] | Y:137 [LYS] | 0:638 [C] | ✔ |
Y:137 [LYS] | 0:639 [A] | Y:137 [LYS] | 0:639 [A] | ✔ |
Y:116 [LEU] | 0:1266 [U] | Y:116 [LEU] | 0:1266 [U] | ✔ |
Y:116 [LEU] | 0:1267 [C] | Y:116 [LEU] | 0:1267 [C] | ✔ |
Y:188 [HIS] | 0:1311 [G] | Y:188 [HIS] | 0:1311 [G] | ✔ |
Y:188 [HIS] | 0:1312 [G] | Y:188 [HIS] | 0:1312 [G] | ✔ |
Y:149 [GLN] | 0:623 [U] | Y:149 [GLN] | 0:623 [U] | ✔ |
Y:149 [GLN] | 0:1071 [G] | Y:149 [GLN] | 0:1071 [G] | ✔ |
Y:149 [GLN] | 0:1072 [G] | Y:149 [GLN] | 0:1072 [G] | ✔ |
Y:149 [GLN] | 0:1293 [U] | Y:149 [GLN] | 0:1293 [U] | ✔ |
Y:149 [GLN] | 0:1294 [A] | Y:149 [GLN] | 0:1294 [A] | ✔ |
Y:212 [ARG] | 0:319 [A] | Y:212 [ARG] | 0:319 [A] | ✔ |
Y:212 [ARG] | 0:320 [G] | Y:212 [ARG] | 0:320 [G] | ✔ |
Y:212 [ARG] | 0:1314 [U] | Y:212 [ARG] | 0:1314 [U] | ✔ |
Y:212 [ARG] | 0:1315 [G] | Y:212 [ARG] | 0:1315 [G] | ✔ |
Y:173 [ALA] | 0:1268 [C] | Y:173 [ALA] | 0:1268 [C] | ✔ |
Y:112 [GLU] | 0:1267 [C] | Y:112 [GLU] | 0:1267 [C] | ✔ |
Y:144 [ARG] | 0:905 [C] | Y:144 [ARG] | 0:905 [C] | ✔ |
Y:144 [ARG] | 0:906 [C] | Y:144 [ARG] | 0:906 [C] | ✔ |
Y:144 [ARG] | 0:1330 [A] | Y:144 [ARG] | 0:1330 [A] | ✔ |
Y:144 [ARG] | 0:1331 [A] | Y:144 [ARG] | 0:1331 [G] | ✔ |
Y:144 [ARG] | 0:1356 [A] | Y:144 [ARG] | 0:1356 [A] | ✔ |
Y:134 [HIS] | 0:538 [C] | Y:134 [HIS] | 0:538 [C] | ✔ |
Y:134 [HIS] | 0:539 [G] | Y:134 [HIS] | 0:539 [G] | ✔ |
Y:177 [LYS] | 0:1326 [U] | Y:177 [LYS] | 0:1326 [C] | ✔ |
Y:177 [LYS] | 0:1327 [G] | Y:177 [LYS] | 0:1327 [G] | ✔ |
Y:118 [THR] | 0:595 [U] | Y:118 [THR] | 0:595 [U] | ✔ |
Y:118 [THR] | 0:596 [C] | Y:118 [THR] | 0:596 [C] | ✔ |
Y:205 [ILE] | 0:1334 [C] | Y:205 [ILE] | 0:1334 [C] | ✔ |
Y:205 [ILE] | 0:1335 [C] | Y:205 [ILE] | 0:1335 [C] | ✔ |
Y:216 [ARG] | 0:320 [G] | Y:216 [ARG] | 0:320 [G] | ✔ |
Y:160 [LYS] | 0:537 [G] | Y:160 [LYS] | 0:537 [G] | ✔ |
Y:160 [LYS] | 0:538 [C] | Y:160 [LYS] | 0:538 [C] | ✔ |
Y:160 [LYS] | 0:539 [G] | Y:160 [LYS] | 0:539 [G] | ✔ |
Y:160 [LYS] | 0:540 [A] | Y:160 [LYS] | 0:540 [A] | ✔ |
Y:160 [LYS] | 0:618 [G] | Y:160 [LYS] | 0:618 [G] | ✔ |
Y:160 [LYS] | 0:620 [A] | Y:160 [LYS] | 0:620 [A] | ✔ |
Y:157 [ILE] | 0:617 [C] | Y:157 [ILE] | 0:617 [C] | ❌ 1YHQ_Y_0 |
Y:148 [GLY] | 0:621 [C] | Y:148 [GLY] | 0:621 [C] | ❌ 1YHQ_Y_0 |
Y:207 [SER] | 0:1333 [U] | Y:207 [SER] | 0:1333 [U] | ❌ 1YHQ_Y_0 |
Y:165 [GLU] | 0:1292 [G] | Y:165 [GLU] | 0:1292 [G] | ❌ 1YHQ_Y_0 |
Y:167 [GLY] | 0:1267 [C] | Y:167 [GLY] | 0:1267 [C] | ❌ 1YHQ_Y_0 |
Y:128 [PHE] | 0:541 [C] | Y:128 [PHE] | 0:541 [C] | ❌ 1YHQ_Y_0 |
Y:134 [HIS] | 0:537 [G] | Y:134 [HIS] | 0:537 [G] | ❌ 1YHQ_Y_0 |
Y:112 [GLU] | 0:1266 [U] | Y:112 [GLU] | 0:1266 [U] | ❌ 1VQ8_Y_0 |
Y:143 [TRP] | 0:1331 [A] | Y:143 [TRP] | 0:1331 [G] | ❌ 1VQ8_Y_0 |
Y:149 [GLN] | 0:624 [U] | Y:149 [GLN] | 0:624 [U] | ❌ 1VQ8_Y_0 |
Y:207 [SER] | 0:1318 [A] | Y:207 [SER] | 0:1318 [A] | ❌ 1VQ8_Y_0 |
Y:209 [VAL] | 0:1316 [G] | Y:209 [VAL] | 0:1316 [G] | ❌ 1VQ8_Y_0 |
Y:213 [LYS] | 0:1311 [G] | Y:213 [LYS] | 0:1311 [G] | ❌ 1VQ8_Y_0 |
Y:213 [LYS] | 0:1315 [G] | Y:213 [LYS] | 0:1315 [G] | ❌ 1VQ8_Y_0 |
Y:227 [ARG] | 0:553 [G] | Y:227 [ARG] | 0:553 [G] | ❌ 1VQ8_Y_0 |
Y:137 [LYS] | 0:520 [A] | Y:137 [LYS] | 0:520 [A] | ❌ 1YHQ_0:520 no longer at interface |
Y:144 [ARG] | 0:1355 [A] | Y:144 [ARG] | 0:1355 [A] | ❌ 1VQ8_0:1355 no longer at interface |
Y:144 [ARG] | 0:904 [U] | Y:144 [ARG] | 0:904 [U] | ❌ 1VQ8_0:904 no longer at interface |
Y:216 [ARG] | 0:321 [A] | Y:216 [ARG] | 0:321 [A] | ❌ 1VQ8_0:321 no longer at interface |
Y:97 [LEU] | 0:550 [C] | Y:97 [LEU] | 0:550 [C] | ❌ 1VQ8_Y:97, 1VQ8_0:550 no longer at interface |
Y:129 [ASN] | 0:540 [A] | Y:129 [ASN] | 0:540 [A] | ❌ 1YHQ_Y:129 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Ribosomal protein L32e | Archaeal large subunit ribosomal RNA | 1.0 | 0.15 | 0.95 | 1.0 | 1.0 | 0.99 | 0.99 | 0.99 | 0.99 | 0.89 | 0.29 |
Other pairs involving 1VQ8_Y_0 or 1YHQ_Y_0
Total number of entries: 5
Interface 1 | Interface 2 |
Percentage conservation |
Interface TM-score |
Interface RMSD |
Percentage identity |
Common ECOD label(s) |
Common RFAM label(s) |
Explore both interfaces |
---|---|---|---|---|---|---|---|---|
1VQ8_Y_0 | 1YHQ_Y_0 | 0.99 | 1.0 | 0.15 | 0.95 | Ribosomal protein L32e | Archaeal large subunit ribosomal RNA | compare |
1VQ8_Y_0 | 6AZ3_f_1 | 0.68 | 0.77 | 1.52 | 0.3 | Ribosomal protein L32e | compare | |
1YHQ_Y_0 | 6AZ3_f_1 | 0.68 | 0.78 | 1.54 | 0.33 | Ribosomal protein L32e | compare | |
1VQ8_Y_0 | 7O7Y_Be_B5 | 0.70 | 0.93 | 1.76 | 0.26 | Ribosomal protein L32e | compare | |
1YHQ_Y_0 | 7O7Y_Be_B5 | 0.70 | 0.93 | 1.78 | 0.26 | Ribosomal protein L32e | compare |