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All interfaces > All interologs > Interface groups > group59 > 4AL5_A_B

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Licorice
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Licorice
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Chain
Chain (with hetatm)
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Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

4AL5_A
4AL5_B
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:29 [HIS] B:20 [G] 4.36 B:6 [C] 98.97
A:29 [HIS] B:21 [C] 2.91 98.97
A:102 [ARG] B:6 [C] 4.18 B:20 [G] 98.09
A:102 [ARG] B:18 [C] 4.71 B:8 [G] 98.09
A:102 [ARG] B:19 [A] 3.89 B:7 [U] 98.09
A:102 [ARG] B:20 [G] 2.74 B:6 [C] base:SC, base:SC 98.09
A:104 [GLN] B:6 [C] 4.64 B:20 [G] 84.13
A:104 [GLN] B:7 [U] 4.65 B:19 [A] 84.13
A:104 [GLN] B:8 [G] 4.36 B:18 [C] 84.13
A:104 [GLN] B:18 [C] 3.14 B:8 [G] base/AA stacks 84.13
A:104 [GLN] B:19 [A] 2.83 B:7 [U] base:SC, base:SC 84.13
A:104 [GLN] B:20 [G] 4.21 B:6 [C] 84.13
A:105 [ALA] B:5 [A] 4.51 38.58
A:106 [LYS] B:15 [A] 4.57 B:11 [G] 79.64
A:107 [SER] B:5 [A] 3.55 sugar:SC 74.74
A:107 [SER] B:6 [C] 2.74 B:20 [G] 74.74
A:108 [ASN] B:6 [C] 3.27 B:20 [G] 71.5
A:108 [ASN] B:7 [U] 3.78 B:19 [A] 71.5
A:111 [ARG] B:5 [A] 4.83 80.8
A:111 [ARG] B:6 [C] 3.01 B:20 [G] 80.8
A:111 [ARG] B:7 [U] 2.72 B:19 [A] 80.8
A:111 [ARG] B:8 [G] 3.27 B:18 [C] 80.8
A:112 [LEU] B:14 [U] 3.71 61.13
A:114 [ARG] B:7 [U] 3.24 B:19 [A] 84.55
A:114 [ARG] B:8 [G] 2.6 B:18 [C] 84.55
A:115 [ARG] B:9 [C] 3.12 B:17 [G] base/AA stacks 87.9
A:115 [ARG] B:10 [C] 2.83 B:16 [G] base/AA stacks 87.9
A:115 [ARG] B:11 [G] 2.42 B:15 [A] base:SC, base:SC 87.9
A:116 [LEU] B:13 [A] 3.65 41.86
A:116 [LEU] B:14 [U] 4.2 41.86
A:119 [ARG] B:10 [C] 3.8 B:16 [G] 83.03
A:119 [ARG] B:11 [G] 2.94 B:15 [A] base/AA stacks 83.03
A:119 [ARG] B:12 [U] 3.62 83.03
A:119 [ARG] B:13 [A] 2.65 83.03
A:120 [HIS] B:12 [U] 3.24 49.46
A:120 [HIS] B:13 [A] 3.07 49.46
A:130 [ARG] B:14 [U] 2.75 36.51
A:131 [ILE] B:14 [U] 3.48 60.41
A:132 [PRO] B:14 [U] 4.84 49.57
A:135 [VAL] B:14 [U] 3.75 28.1
A:135 [VAL] B:15 [A] 3.6 B:11 [G] 28.1
A:137 [ARG] B:5 [A] 4.24 27.49
A:138 [ALA] B:5 [A] 3.54 23.84
A:139 [LEU] B:5 [A] 2.82 base:BB, base:BB 32.34
A:147 [ARG] B:20 [G] 4.93 B:6 [C] 42.64
A:147 [ARG] B:21 [C] 4.04 42.64
A:148 [SER] B:20 [G] 2.91 B:6 [C] sugar:SC 99.0
A:148 [SER] B:21 [C] 3.2 99.0
A:149 [GLN] B:20 [G] 4.08 B:6 [C] 29.23
A:149 [GLN] B:21 [C] 2.7 29.23
A:150 [SER] B:20 [G] 2.91 B:6 [C] 94.21
A:150 [SER] B:21 [C] 2.69 94.21
A:151 [THR] B:7 [U] 4.41 B:19 [A] 82.82
A:151 [THR] B:20 [G] 3.15 B:6 [C] base:SC, base:SC 82.82
A:153 [GLN] B:6 [C] 2.72 B:20 [G] sugar:SC 73.7
A:153 [GLN] B:7 [U] 3.52 B:19 [A] 73.7
A:153 [GLN] B:20 [G] 3.1 B:6 [C] 73.7
A:154 [HIS] B:6 [C] 3.75 B:20 [G] 35.39
A:155 [PHE] B:6 [C] 3.26 B:20 [G] 81.04
A:155 [PHE] B:20 [G] 3.39 B:6 [C] base/AA stacks 81.04
A:156 [ARG] B:4 [C] 3.04 55.57
A:156 [ARG] B:5 [A] 3.4 base/AA stacks 55.57
A:156 [ARG] B:6 [C] 4.6 B:20 [G] 55.57
A:158 [PHE] B:5 [A] 3.3 base/AA stacks 62.65
A:174 [THR] B:19 [A] 3.57 B:7 [U] 80.48
A:175 [CYS] B:20 [G] 3.14 B:6 [C] 69.79
A:176 [TYR] B:20 [G] 3.18 B:6 [C] sugar:SC 93.1
A:176 [TYR] B:21 [C] 4.08 93.1

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group59 4AL5_A_B A: Csy4 endoribonuclease, Pseudomonas aeruginosa (genetically engineered) B: Pseudomonas aeruginosa (synthetic) Q02MM2 CRISPR transcript (pre-crRNA) processing endoribonuclease-related ✘

Interologs

Total number of interologs for this interface: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
2XLK_B_D 4AL5_A_B 0.67 0.96 0.8 0.86 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare
2XLI_A_B 4AL5_A_B 0.60 0.97 0.81 0.95 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare
4AL5_A_B 4AL7_A_B 0.75 0.95 1.61 0.85 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare