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All interfaces > All interologs > Interface groups > group6 > 3DD2_H_B vs 5DO4_H_A

Interface analysis


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Common contacts -

3DD2_H
3DD2_B
5DO4_H
5DO4_A
Conserved?
H:178 [ASP] B:7 [A] H:183 [ASP] A:7 [A] ✔
H:178 [ASP] B:10 [G] H:183 [ASP] A:10 [G] ✔
H:178 [ASP] B:15 [A] H:183 [ASP] A:15 [A] ✔
H:178 [ASP] B:16 [G] H:183 [ASP] A:16 [G] ✔
H:234 [LEU] B:7 [A] H:246 [LEU] A:7 [A] ✔
H:234 [LEU] B:8 [A] H:246 [LEU] A:8 [A] ✔
H:237 [TRP] B:7 [A] H:249 [TRP] A:7 [A] ✔
H:164 [GLU] B:14 [A] H:169 [GLU] A:14 [A] ✔
H:164 [GLU] B:15 [A] H:169 [GLU] A:15 [A] ✔
H:132 [ALA] B:14 [A] H:132 [ALA] A:14 [A] ✔
H:132 [ALA] B:15 [A] H:132 [ALA] A:15 [A] ✔
H:131 [GLN] B:14 [A] H:131 [GLN] A:14 [A] ✔
H:131 [GLN] B:16 [G] H:131 [GLN] A:16 [G] ✔
H:169 [LYS] B:13 [G] H:174 [LYS] A:13 [G] ✔
H:101 [ARG] B:8 [A] H:98 [ARG] A:8 [A] ✔
H:101 [ARG] B:9 [A] H:98 [ARG] A:9 [A] ✔
H:163 [VAL] B:15 [A] H:168 [VAL] A:15 [A] ✔
H:100 [ASP] B:9 [A] H:97 [ASP] A:9 [A] ✔
H:180 [MET] B:15 [A] H:185 [MET] A:15 [A] ✔
H:93 [ARG] B:8 [A] H:89 [ARG] A:8 [A] ✔
H:230 [HIS] B:15 [A] H:242 [HIS] A:15 [A] ✔
H:235 [LYS] B:7 [A] H:247 [LYS] A:7 [A] ✔
H:91 [HIS] B:7 [A] H:87 [HIS] A:7 [A] ✔
H:179 [ASN] B:7 [A] H:184 [ASN] A:7 [A] ✔
H:179 [ASN] B:8 [A] H:184 [ASN] A:8 [A] ✔
H:236 [LYS] B:5 [A] H:248 [LYS] A:5 [A] ✔
H:236 [LYS] B:7 [A] H:248 [LYS] A:7 [A] ✔
H:165 [ARG] B:13 [G] H:170 [ARG] A:13 [G] ✔
H:165 [ARG] B:14 [A] H:170 [ARG] A:14 [A] ✔
H:165 [ARG] B:15 [A] H:170 [ARG] A:15 [A] ✔
H:233 [ARG] B:7 [A] H:245 [ARG] A:7 [A] ✔
H:233 [ARG] B:15 [A] H:245 [ARG] A:15 [A] ✔
H:233 [ARG] B:16 [G] H:245 [ARG] A:16 [G] ✔
H:166 [PRO] B:13 [G] H:171 [PRO] A:13 [G] ✔
H:166 [PRO] B:15 [A] H:171 [PRO] A:15 [A] ✔
H:131 [GLN] B:15 [A] H:131 [GLN] A:15 [A] ❌ 5DO4_H_A
H:129A [ALA] B:16 [G] H:127 [ALA] A:16 [G] ❌ 3DD2_H:129A no longer at interface
H:130 [LEU] B:16 [G] H:130 [LEU] A:16 [G] ❌ 3DD2_H:130 no longer at interface
H:133 [GLY] B:14 [A] H:133 [GLY] A:14 [A] ❌ 3DD2_H:133 no longer at interface
H:175 [ARG] B:10 [G] H:180 [ARG] A:10 [G] ❌ 3DD2_H:175 no longer at interface
H:240 [LYS] B:5 [A] H:252 [LYS] A:5 [A] ❌ 3DD2_H:240 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
0.99 0.16 0.95 0.99 0.69 0.95 1.0 0.99 0.94 0.92 0.83


Other pairs involving 3DD2_H_B or 5DO4_H_A

Total number of entries: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
3DD2_H_B 5DO4_H_A 0.99 0.99 0.16 0.95 compare