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All interfaces > All interologs > Interface groups > group60 > 2ZKO_A_C,D vs 6SX2_A_C,D

Interface analysis


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Common contacts -

2ZKO_A
2ZKO_C,D
6SX2_A
6SX2_C,D
Conserved?
A:38 [ARG] C:7 [C] A:38 [ALA] C:7 [U] ✔
A:38 [ARG] C:8 [A] A:38 [ALA] C:8 [G] ✔
A:31 [PRO] C:5 [A] A:31 [PRO] C:5 [A] ✔
A:31 [PRO] C:6 [G] A:31 [PRO] C:6 [C] ✔
A:31 [PRO] D:36 [U] A:31 [PRO] D:34 [U] ✔
A:31 [PRO] D:37 [G] A:31 [PRO] D:35 [U] ✔
A:46 [ARG] D:25 [C] A:46 [ARG] D:23 [A] ✔
A:46 [ARG] D:26 [A] A:46 [ARG] D:24 [A] ✔
A:5 [THR] C:16 [G] A:5 [THR] C:16 [U] ✔
A:5 [THR] C:17 [U] A:5 [THR] C:17 [A] ✔
A:42 [SER] D:26 [A] A:42 [ALA] D:24 [A] ✔
A:42 [SER] D:27 [G] A:42 [ALA] D:25 [C] ✔
A:34 [ASP] C:6 [G] A:34 [ASP] C:6 [C] ✔
A:34 [ASP] C:7 [C] A:34 [ASP] C:7 [U] ✔
A:34 [ASP] D:36 [U] A:34 [ASP] D:34 [U] ✔
A:30 [ALA] D:36 [U] A:30 [ALA] D:34 [U] ✔
A:30 [ALA] D:37 [G] A:30 [ALA] D:35 [U] ✔
A:50 [LEU] C:17 [U] A:50 [LEU] C:17 [A] ✔
A:45 [GLY] D:25 [C] A:45 [GLY] D:23 [A] ✔
A:45 [GLY] D:26 [A] A:45 [GLY] D:24 [A] ✔
A:49 [THR] C:17 [U] A:49 [THR] C:17 [A] ✔
A:49 [THR] D:24 [A] A:49 [THR] D:22 [U] ✔
A:49 [THR] D:25 [C] A:49 [THR] D:23 [A] ✔
A:41 [LYS] D:26 [A] A:41 [ALA] D:24 [A] ✔
A:29 [ASP] D:37 [G] A:29 [ASP] D:35 [U] ✔
A:1 [MET] C:18 [C] A:1 [SER] C:18 [C] ✔
A:2 [ASP] C:17 [U] A:2 [ASP] C:17 [A] ✔
A:2 [ASP] C:18 [C] A:2 [ASP] C:18 [C] ✔
A:35 [ARG] C:5 [A] A:35 [ARG] C:5 [A] ✔
A:35 [ARG] C:6 [G] A:35 [ARG] C:6 [C] ✔
A:35 [ARG] C:7 [C] A:35 [ARG] C:7 [U] ✔
A:38 [ARG] D:27 [G] A:38 [ALA] D:25 [C] ❌ 6SX2_A_C,D
A:41 [LYS] C:8 [A] A:41 [ALA] C:8 [G] ❌ 6SX2_A_C,D
A:1 [MET] C:17 [U] A:1 [SER] C:17 [A] ❌ 2ZKO_A_C,D
A:49 [THR] C:18 [C] A:49 [THR] C:18 [C] ❌ 2ZKO_A_C,D
A:38 [ARG] D:28 [C] A:38 [ALA] D:26 [U] ❌ 6SX2_D:26 no longer at interface
A:34 [ASP] D:35 [C] A:34 [ASP] D:33 [G] ❌ 2ZKO_D:35 no longer at interface
A:39 [ASP] D:27 [G] A:39 [ASP] D:25 [C] ❌ 2ZKO_A:39 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
S15/NS1 RNA-binding domain 0.97 0.47 0.29 0.98 0.8 1.0 0.93 0.89 0.93 0.33 0.43


Other pairs involving 2ZKO_A_C,D or 6SX2_A_C,D

Total number of entries: 5

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
2ZKO_A_C,D 6SX0_A_C,D 0.94 0.95 0.28 0.29 S15/NS1 RNA-binding domain compare
2ZKO_A_C,D 6ZLC_A_C,D 0.98 0.94 0.72 0.87 S15/NS1 RNA-binding domain compare
2ZKO_A_C,D 6SX2_A_C,D 0.89 0.97 0.47 0.29 S15/NS1 RNA-binding domain compare
6SX0_A_C,D 6SX2_A_C,D 0.97 0.97 0.35 0.87 S15/NS1 RNA-binding domain compare
6SX2_A_C,D 6ZLC_A_C,D 0.90 0.99 0.57 0.29 S15/NS1 RNA-binding domain compare