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All interfaces > All interologs > Interface groups > group61 > 4Y4O_1T_1A vs 6S0Z_N_A

Interface analysis


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Common contacts -

4Y4O_1T
4Y4O_1A
6S0Z_N
6S0Z_A
Conserved?
1T:4 [GLY] 1A:2885 [C] N:4 [HIS] A:2895 [G] ✔
1T:4 [GLY] 1A:2886 [G] N:4 [HIS] A:2896 [A] ✔
1T:56 [GLY] 1A:2855 [G] N:56 [GLY] A:2865 [G] ✔
1T:96 [ARG] 1A:1784 [G] N:96 [ARG] A:1780 [G] ✔
1T:96 [ARG] 1A:1785 [C] N:96 [ARG] A:1781 [C] ✔
1T:96 [ARG] 1A:2730 [G] N:96 [ARG] A:2744 [G] ✔
1T:96 [ARG] 1A:2858 [G] N:96 [ARG] A:2868 [G] ✔
1T:54 [ARG] 1A:2855 [G] N:54 [GLY] A:2865 [G] ✔
1T:54 [ARG] 1A:2856 [G] N:54 [GLY] A:2866 [G] ✔
1T:101 [PHE] 1A:1785 [C] N:101 [TYR] A:1781 [C] ✔
1T:58 [ASN] 1A:2694 [U] N:58 [SER] A:2709 [U] ✔
1T:58 [ASN] 1A:2695 [C] N:58 [SER] A:2710 [C] ✔
1T:51 [ARG] 1A:2697 [G] N:51 [LYS] A:2712 [G] ✔
1T:51 [ARG] 1A:2732 [G] N:51 [LYS] A:2746 [G] ✔
1T:53 [ARG] 1A:2695 [C] N:53 [ARG] A:2710 [C] ✔
1T:53 [ARG] 1A:2696 [U] N:53 [ARG] A:2711 [U] ✔
1T:53 [ARG] 1A:2856 [G] N:53 [ARG] A:2866 [G] ✔
1T:23 [ARG] 1A:2859 [U] N:23 [ARG] A:2869 [G] ✔
1T:23 [ARG] 1A:2877 [G] N:23 [ARG] A:2887 [G] ✔
1T:60 [THR] 1A:2695 [C] N:60 [THR] A:2710 [C] ✔
1T:60 [THR] 1A:2696 [U] N:60 [THR] A:2711 [U] ✔
1T:75 [ILE] 1A:2696 [U] N:75 [THR] A:2711 [U] ✔
1T:93 [ARG] 1A:2873 [C] N:93 [LYS] A:2883 [U] ✔
1T:97 [ALA] 1A:2857 [U] N:97 [ALA] A:2867 [U] ✔
1T:97 [ALA] 1A:2858 [G] N:97 [ALA] A:2868 [G] ✔
1T:94 [ALA] 1A:2859 [U] N:94 [VAL] A:2869 [G] ✔
1T:52 [ILE] 1A:2856 [G] N:52 [ARG] A:2866 [G] ✔
1T:98 [LYS] 1A:2730 [G] N:98 [LYS] A:2744 [G] ✔
1T:98 [LYS] 1A:2731 [G] N:98 [LYS] A:2745 [G] ✔
1T:98 [LYS] 1A:2732 [G] N:98 [LYS] A:2746 [G] ✔
1T:98 [LYS] 1A:2857 [U] N:98 [LYS] A:2867 [U] ✔
1T:98 [LYS] 1A:2858 [G] N:98 [LYS] A:2868 [G] ✔
1T:100 [TYR] 1A:2731 [G] N:100 [TYR] A:2745 [G] ✔
1T:100 [TYR] 1A:2732 [G] N:100 [TYR] A:2746 [G] ✔
1T:95 [ARG] 1A:1783 [C] N:95 [ARG] A:1779 [C] ✔
1T:95 [ARG] 1A:1784 [G] N:95 [ARG] A:1780 [G] ✔
1T:95 [ARG] 1A:1785 [C] N:95 [ARG] A:1781 [C] ✔
1T:95 [ARG] 1A:2858 [G] N:95 [ARG] A:2868 [G] ✔
1T:95 [ARG] 1A:2859 [U] N:95 [ARG] A:2869 [G] ✔
1T:55 [ASN] 1A:2855 [G] N:55 [GLY] A:2865 [G] ✔
1T:24 [PRO] 1A:2877 [G] N:24 [PRO] A:2887 [G] ✔
1T:54 [ARG] 1A:2858 [G] N:54 [GLY] A:2868 [G] ❌ 6S0Z_N_A
1T:101 [PHE] 1A:2731 [G] N:101 [TYR] A:2745 [G] ❌ 6S0Z_N_A
1T:53 [ARG] 1A:2697 [G] N:53 [ARG] A:2712 [G] ❌ 6S0Z_N_A
1T:75 [ILE] 1A:2697 [G] N:75 [THR] A:2712 [G] ❌ 6S0Z_N_A
1T:93 [ARG] 1A:1784 [G] N:93 [LYS] A:1780 [G] ❌ 6S0Z_N_A
1T:93 [ARG] 1A:2859 [U] N:93 [LYS] A:2869 [G] ❌ 6S0Z_N_A
1T:94 [ALA] 1A:2858 [G] N:94 [VAL] A:2868 [G] ❌ 6S0Z_N_A
1T:98 [LYS] 1A:2856 [G] N:98 [LYS] A:2866 [G] ❌ 6S0Z_N_A
1T:55 [ASN] 1A:2694 [U] N:55 [GLY] A:2709 [U] ❌ 6S0Z_N_A
1T:55 [ASN] 1A:2695 [C] N:55 [GLY] A:2710 [C] ❌ 6S0Z_N_A
1T:53 [ARG] 1A:2694 [U] N:53 [ARG] A:2709 [U] ❌ 4Y4O_1T_1A
1T:54 [ARG] 1A:2695 [C] N:54 [GLY] A:2710 [C] ❌ 4Y4O_1T_1A
1T:56 [GLY] 1A:2854 [G] N:56 [GLY] A:2864 [A] ❌ 6S0Z_A:2864 no longer at interface
1T:55 [ASN] 1A:2854 [G] N:55 [GLY] A:2864 [A] ❌ 6S0Z_A:2864 no longer at interface
1T:53 [ARG] 1A:2733 [U] N:53 [ARG] A:2747 [U] ❌ 4Y4O_1A:2733 no longer at interface
1T:93 [ARG] 1A:2872 [G] N:93 [LYS] A:2882 [A] ❌ 4Y4O_1A:2872 no longer at interface
1T:96 [ARG] 1A:2705 [A] N:96 [ARG] A:2720 [A] ❌ 4Y4O_1A:2705 no longer at interface
1T:59 [THR] 1A:2855 [G] N:59 [GLU] A:2865 [G] ❌ 6S0Z_N:59 no longer at interface
1T:115 [ARG] 1A:1783 [C] N:113 [GLN] A:1779 [C] ❌ 6S0Z_N:113 no longer at interface
1T:5 [ALA] 1A:2885 [C] N:5 [LYS] A:2895 [G] ❌ 6S0Z_N:5 no longer at interface
1T:1 [MET] 1A:2886 [G] N:2 [THR] A:2896 [A] ❌ 6S0Z_N:2 no longer at interface
1T:2 [ASN] 1A:2885 [C] N:3 [ASN] A:2895 [G] ❌ 6S0Z_N:3 no longer at interface
1T:2 [ASN] 1A:2886 [G] N:3 [ASN] A:2896 [A] ❌ 6S0Z_N:3 no longer at interface
1T:103 [ARG] 1A:2697 [G] N:103 [ARG] A:2712 [G] ❌ 4Y4O_1T:103 no longer at interface
1T:22 [PHE] 1A:2877 [G] N:22 [PHE] A:2887 [G] ❌ 4Y4O_1T:22 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
SH3 Bacterial large subunit ribosomal RNA 0.96 2.36 0.45 0.94 0.97 0.91 0.86 0.84 0.71 0.44 0.52


Other pairs involving 4Y4O_1T_1A or 6S0Z_N_A

Total number of entries: 5

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0Z_N_A 7K00_o_a 0.75 0.97 1.93 0.36 SH3 Bacterial large subunit ribosomal RNA compare
6S0Z_N_A 7RYG_O_A 0.64 0.98 2.05 0.39 SH3 Bacterial large subunit ribosomal RNA compare
4Y4O_1T_1A 6S0Z_N_A 0.84 0.96 2.36 0.45 SH3 Bacterial large subunit ribosomal RNA compare
4Y4O_1T_1A 7RYG_O_A 0.68 0.96 3.22 0.33 SH3 Bacterial large subunit ribosomal RNA compare
4Y4O_1T_1A 7K00_o_a 0.74 0.97 1.19 0.36 SH3 Bacterial large subunit ribosomal RNA compare