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All interfaces > All interologs > Interface groups > group65 > 4YBB_DN_DB vs 6XHV_1Q_1B

Interface analysis


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Common contacts -

4YBB_DN
4YBB_DB
6XHV_1Q
6XHV_1B
Conserved?
DN:38 [ARG] DB:89 [U] 1Q:39 [PRO] 1B:90 [A] ✔
DN:38 [ARG] DB:90 [C] 1Q:39 [PRO] 1B:91 [C] ✔
DN:19 [GLY] DB:90 [C] 1Q:19 [GLY] 1B:91 [C] ✔
DN:19 [GLY] DB:91 [C] 1Q:19 [GLY] 1B:92 [C] ✔
DN:17 [ASN] DB:90 [C] 1Q:17 [LEU] 1B:91 [C] ✔
DN:16 [ARG] DB:89 [U] 1Q:16 [ARG] 1B:90 [A] ✔
DN:16 [ARG] DB:90 [C] 1Q:16 [ARG] 1B:91 [C] ✔
DN:18 [ARG] DB:80 [U] 1Q:18 [LYS] 1B:80 [U] ✔
DN:18 [ARG] DB:90 [C] 1Q:18 [LYS] 1B:91 [C] ✔
DN:18 [ARG] DB:91 [C] 1Q:18 [LYS] 1B:92 [C] ✔
DN:38 [ARG] DB:91 [C] 1Q:39 [PRO] 1B:92 [C] ❌ 6XHV_1Q_1B
DN:18 [ARG] DB:79 [G] 1Q:18 [LYS] 1B:79 [C] ❌ 6XHV_1Q_1B
DN:17 [ASN] DB:89 [U] 1Q:17 [LEU] 1B:90 [A] ❌ 4YBB_DN_DB
DN:17 [ASN] DB:91 [C] 1Q:17 [LEU] 1B:92 [C] ❌ 4YBB_DN_DB
DN:19 [GLY] DB:79 [G] 1Q:19 [GLY] 1B:79 [C] ❌ 4YBB_DN_DB
DN:20 [LEU] DB:91 [C] 1Q:20 [ALA] 1B:92 [C] ❌ 4YBB_DN_DB
DN:20 [LEU] DB:78 [A] 1Q:20 [ALA] 1B:78 [A] ❌ 6XHV_1B:78 no longer at interface
DN:15 [GLY] DB:90 [C] 1Q:15 [GLY] 1B:91 [C] ❌ 4YBB_DN:15 no longer at interface
DN:37 [GLY] DB:89 [U] 1Q:38 [GLU] 1B:90 [A] ❌ 4YBB_DN:37 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L10e 5S ribosomal RNA 0.93 0.95 0.33 0.97 0.88 1.0 1.0 0.75 0.56 0.40 0.33


Other pairs involving 4YBB_DN_DB or 6XHV_1Q_1B

Total number of entries: 5

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4YBB_DN_DB 7RYG_L_B 0.79 0.92 0.85 0.67 Ribosomal protein L10e 5S ribosomal RNA compare
4YBB_DN_DB 6XHV_1Q_1B 0.75 0.93 0.95 0.33 Ribosomal protein L10e 5S ribosomal RNA compare
4YBB_DN_DB 7PJS_M_B 0.98 0.99 0.21 1.0 Ribosomal protein L10e 5S ribosomal RNA compare
6XHV_1Q_1B 7PJS_M_B 0.71 0.95 0.89 0.33 Ribosomal protein L10e 5S ribosomal RNA compare
6XHV_1Q_1B 7RYG_L_B 0.78 0.92 1.04 0.2 Ribosomal protein L10e 5S ribosomal RNA compare