RNAprotDB

Interface analysis

7PJS_M	7PJS_B	7RYG_L	7RYG_B	Conserved?
M:38 [ARG]	B:90 [C]	L:39 [ARG]	B:87 [A]	✔
M:38 [ARG]	B:91 [C]	L:39 [ARG]	B:88 [C]	✔
M:19 [GLY]	B:79 [G]	L:19 [GLY]	B:77 [G]	✔
M:19 [GLY]	B:91 [C]	L:19 [GLY]	B:88 [C]	✔
M:17 [ASN]	B:90 [C]	L:17 [ASN]	B:87 [A]	✔
M:16 [ARG]	B:90 [C]	L:16 [ARG]	B:87 [A]	✔
M:18 [ARG]	B:90 [C]	L:18 [THR]	B:87 [A]	✔
M:18 [ARG]	B:91 [C]	L:18 [THR]	B:88 [C]	✔
M:19 [GLY]	B:90 [C]	L:19 [GLY]	B:87 [A]	❌ 7RYG_L_B
M:16 [ARG]	B:89 [U]	L:16 [ARG]	B:86 [U]	❌ 7RYG_L_B
M:18 [ARG]	B:79 [G]	L:18 [THR]	B:77 [G]	❌ 7RYG_L_B
M:17 [ASN]	B:89 [U]	L:17 [ASN]	B:86 [U]	❌ 7PJS_M_B
M:38 [ARG]	B:89 [U]	L:39 [ARG]	B:86 [U]	❌ 7PJS_M_B
M:18 [ARG]	B:80 [U]	L:18 [THR]	B:78 [U]	❌ 7RYG_B:78 no longer at interface
M:20 [LEU]	B:78 [A]	L:20 [LEU]	B:76 [A]	❌ 7RYG_L:20 no longer at interface

Export the table of contacts

Common ECOD label(s)	Common RFAM label(s)	Interface TM-score	Interface RMSD	Percentage identity	Protein TM-score	RNA TM-score	Protein coverage	RNA coverage	Percentage conservation	Apolar conservation	H-bond conservation	Percentage switching out
Ribosomal protein L10e	5S ribosomal RNA	0.91	0.83	0.67	0.97	0.87	0.83	0.83	0.63	0.65	0.20	0.29

Other pairs involving 7PJS_M_B or 7RYG_L_B

Interface 1	Interface 2	Percentage conservation	Interface TM-score	Interface RMSD	Percentage identity	Common ECOD label(s)	Common RFAM label(s)	Explore both interfaces
4YBB_DN_DB	7RYG_L_B	0.79	0.92	0.85	0.67	Ribosomal protein L10e	5S ribosomal RNA	compare
4YBB_DN_DB	7PJS_M_B	0.98	0.99	0.21	1.0	Ribosomal protein L10e	5S ribosomal RNA	compare
7PJS_M_B	7RYG_L_B	0.63	0.91	0.83	0.67	Ribosomal protein L10e	5S ribosomal RNA	compare
6XHV_1Q_1B	7PJS_M_B	0.71	0.95	0.89	0.33	Ribosomal protein L10e	5S ribosomal RNA	compare
6XHV_1Q_1B	7RYG_L_B	0.78	0.92	1.04	0.2	Ribosomal protein L10e	5S ribosomal RNA	compare

Interface 1

Interface 2

Percentage conservation

Interface TM-score

Interface RMSD

Percentage identity

Common ECOD label(s)

Common RFAM label(s)

Explore both interfaces

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