RNAprotDB

Interface analysis

Contacts -

7RYG_L	7RYG_B	Distance	Base Pair	Residue conservation
L:16 [ARG]	B:87 [A]	5.0		66.89
L:17 [ASN]	B:86 [U]	4.93		14.38
L:17 [ASN]	B:87 [A]	3.56		14.38
L:18 [THR]	B:87 [A]	3.85		36.56
L:18 [THR]	B:88 [C]	4.56	B:83 [G]	36.56
L:19 [GLY]	B:77 [G]	4.9	B:94 [U]	40.39
L:19 [GLY]	B:88 [C]	3.8	B:83 [G]	40.39
L:22 [HIS]	B:75 [U]	3.44	B:96 [A]	26.26
L:22 [HIS]	B:76 [A]	4.05	B:95 [G]	26.26
L:39 [ARG]	B:86 [U]	2.99		57.88
L:39 [ARG]	B:87 [A]	2.65		57.88
L:39 [ARG]	B:88 [C]	4.82	B:83 [G]	57.88

Export the table of contacts

*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID	Structure ID	Structure description	UniProt ID	ECOD label(s)	RFAM label(s)	Is ribosome?	RCSB PDB link
group65	7RYG_L_B	L: 50s ribosomal protein l16, Acinetobacter baumannii (strain ab0057) (natural) B: 5s ribosomal RNA, Acinetobacter baumannii ab0057 (natural)	B7IA32	Ribosomal protein L10e	5S ribosomal RNA	✔

Interologs

Interface 1	Interface 2	Percentage conservation	Interface TM-score	Interface RMSD	Percentage identity	Common ECOD label(s)	Common RFAM label(s)	Explore both interfaces
4YBB_DN_DB	7RYG_L_B	0.79	0.92	0.85	0.67	Ribosomal protein L10e	5S ribosomal RNA	compare
7PJS_M_B	7RYG_L_B	0.63	0.91	0.83	0.67	Ribosomal protein L10e	5S ribosomal RNA	compare
6XHV_1Q_1B	7RYG_L_B	0.78	0.92	1.04	0.2	Ribosomal protein L10e	5S ribosomal RNA	compare

Interface 1

Interface 2

Percentage conservation

Interface TM-score

Interface RMSD

Percentage identity

Common ECOD label(s)

Common RFAM label(s)

Explore both interfaces

4YBB_DN_DB

7RYG_L_B

0.79