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All interfaces > All interologs > Interface groups > group67 > 5W3V_B_E,F vs 5Z98_B_C,D

Interface analysis


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Common contacts -

5W3V_B
5W3V_E,F
5Z98_B
5Z98_C,D
Conserved?
B:82 [TRP] F:12 [A] B:82 [TRP] D:12 [U] ✔
B:176 [ARG] E:9 [G] B:176 [ARG] C:9 [U] ✔
B:176 [ARG] E:10 [A] B:176 [ARG] C:10 [A] ✔
B:24 [TYR] F:12 [A] B:24 [TYR] D:12 [U] ✔
B:172 [ALA] E:7 [G] B:172 [ALA] C:7 [G] ✔
B:172 [ALA] E:8 [G] B:172 [ALA] C:8 [G] ✔
B:16 [LYS] E:5 [C] B:16 [ARG] C:5 [C] ✔
B:112 [TYR] F:12 [A] B:112 [TYR] D:12 [U] ✔
B:19 [VAL] F:11 [A] B:19 [LEU] D:11 [A] ✔
B:19 [VAL] F:12 [A] B:19 [LEU] D:12 [U] ✔
B:25 [PRO] F:12 [A] B:25 [PRO] D:12 [U] ✔
B:21 [LYS] E:3 [C] B:21 [ARG] C:3 [G] ✔
B:21 [LYS] E:4 [C] B:21 [ARG] C:4 [C] ✔
B:120 [GLN] E:10 [A] B:120 [GLN] C:10 [A] ✔
B:113 [TYR] F:12 [A] B:113 [TYR] D:12 [U] ✔
B:113 [TYR] F:13 [C] B:113 [TYR] D:13 [A] ✔
B:179 [ARG] E:9 [G] B:179 [ARG] C:9 [U] ✔
B:115 [TRP] E:9 [G] B:115 [TRP] C:9 [U] ✔
B:115 [TRP] E:10 [A] B:115 [TRP] C:10 [A] ✔
B:115 [TRP] F:12 [A] B:115 [TRP] D:12 [U] ✔
B:115 [TRP] F:13 [C] B:115 [TRP] D:13 [A] ✔
B:111 [LEU] F:12 [A] B:111 [LEU] D:12 [U] ✔
B:20 [ASN] E:4 [C] B:20 [ARG] C:4 [C] ✔
B:20 [ASN] E:5 [C] B:20 [ARG] C:5 [C] ✔
B:26 [ARG] F:11 [A] B:26 [ARG] D:11 [A] ✔
B:26 [ARG] F:12 [A] B:26 [ARG] D:12 [U] ✔
B:18 [ARG] E:4 [C] B:18 [ARG] C:4 [C] ✔
B:17 [ARG] E:7 [G] B:17 [ARG] C:7 [G] ✔
B:175 [ARG] E:7 [G] B:175 [ARG] C:7 [G] ✔
B:175 [ARG] E:8 [G] B:175 [ARG] C:8 [G] ✔
B:114 [HIS] E:9 [G] B:114 [HIS] C:9 [U] ✔
B:114 [HIS] E:10 [A] B:114 [HIS] C:10 [A] ✔
B:114 [HIS] F:12 [A] B:114 [HIS] D:12 [U] ✔
B:114 [HIS] F:13 [C] B:114 [HIS] D:13 [A] ✔
B:24 [TYR] F:11 [A] B:24 [TYR] D:11 [A] ❌ 5Z98_B_C,D
B:19 [VAL] E:4 [C] B:19 [LEU] C:4 [C] ❌ 5Z98_B_C,D
B:25 [PRO] F:11 [A] B:25 [PRO] D:11 [A] ❌ 5Z98_B_C,D
B:18 [ARG] F:11 [A] B:18 [ARG] D:11 [A] ❌ 5Z98_B_C,D
B:17 [ARG] E:8 [G] B:17 [ARG] C:8 [G] ❌ 5Z98_B_C,D
B:17 [ARG] E:9 [G] B:17 [ARG] C:9 [U] ❌ 5Z98_B_C,D
B:17 [ARG] F:12 [A] B:17 [ARG] D:12 [U] ❌ 5Z98_B_C,D
B:17 [ARG] F:13 [C] B:17 [ARG] D:13 [A] ❌ 5Z98_B_C,D
B:16 [LYS] E:4 [C] B:16 [ARG] C:4 [C] ❌ 5W3V_B_E,F
B:179 [ARG] E:8 [G] B:179 [ARG] C:8 [G] ❌ 5W3V_B_E,F
B:18 [ARG] E:5 [C] B:18 [ARG] C:5 [C] ❌ 5W3V_B_E,F
B:82 [TRP] F:11 [A] B:82 [TRP] D:11 [A] ❌ 5W3V_B_E,F
B:23 [TYR] E:2 [A] B:23 [TYR] C:1 [C] ❌ 5Z98_B:23, 5Z98_C:1 no longer at interface
B:21 [LYS] E:2 [A] B:21 [ARG] C:1 [C] ❌ 5Z98_C:1 no longer at interface
B:17 [ARG] F:14 [C] B:17 [ARG] D:14 [C] ❌ 5Z98_D:4 no longer at interface
B:168 [LYS] E:6 [G] B:168 [LYS] C:6 [G] ❌ 5W3V_B:168, 5W3V_E:6 no longer at interface
B:17 [ARG] E:6 [G] B:17 [ARG] C:6 [G] ❌ 5W3V_E:6 no longer at interface
B:18 [ARG] E:6 [G] B:18 [ARG] C:6 [G] ❌ 5W3V_E:6 no longer at interface
B:23 [TYR] E:3 [C] B:23 [TYR] C:3 [G] ❌ 5Z98_B:23 no longer at interface
B:23 [TYR] E:4 [C] B:23 [TYR] C:4 [C] ❌ 5Z98_B:23 no longer at interface
B:23 [TYR] F:11 [A] B:23 [TYR] D:11 [A] ❌ 5Z98_B:23 no longer at interface
B:110 [ARG] F:12 [A] B:110 [ARG] D:12 [U] ❌ 5W3V_B:110 no longer at interface
B:124 [LEU] E:10 [A] B:124 [ARG] C:10 [A] ❌ 5W3V_B:124 no longer at interface
B:183 [ARG] E:10 [A] B:183 [SER] C:10 [A] ❌ 5W3V_B:183 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Cytidine deaminase-like 0.95 0.86 0.55 0.97 0.43 0.95 0.91 0.64 0.61 0.47 0.50


Other pairs involving 5W3V_B_E,F or 5Z98_B_C,D

Total number of entries: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
5W3V_A_E,F 5Z98_B_C,D 0.66 0.9 1.03 0.36 Cytidine deaminase-like compare
5W3V_B_E,F 5Z98_A_C,D 0.62 0.91 0.91 0.36 Cytidine deaminase-like compare
5W3V_B_E,F 5Z98_B_C,D 0.64 0.95 0.86 0.55 Cytidine deaminase-like compare