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All interfaces > All interologs > Interface groups > group68 > 6AZ3_m_1 vs 7O7Y_Bm_B5

Interface analysis


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Common contacts -

6AZ3_m
6AZ3_1
7O7Y_Bm
7O7Y_B5
Conserved?
m:108 [THR] 1:1270 [U] Bm:108 [VAL] B5:1886 [U] ✔
m:116 [GLY] 1:1268 [G] Bm:116 [GLY] B5:1884 [G] ✔
m:116 [GLY] 1:1269 [G] Bm:116 [GLY] B5:1885 [G] ✔
m:116 [GLY] 1:1361 [C] Bm:116 [GLY] B5:1977 [U] ✔
m:98 [ARG] 1:1268 [G] Bm:98 [M3L] B5:1884 [G] ✔
m:113 [LYS] 1:1360 [C] Bm:113 [LYS] B5:1976 [C] ✔
m:113 [LYS] 1:1361 [C] Bm:113 [LYS] B5:1977 [U] ✔
m:119 [SER] 1:1269 [G] Bm:119 [ASN] B5:1885 [G] ✔
m:119 [SER] 1:1270 [U] Bm:119 [ASN] B5:1886 [U] ✔
m:115 [CYS] 1:1361 [C] Bm:115 [CYS] B5:1977 [U] ✔
m:117 [HIS] 1:1269 [G] Bm:117 [HIS] B5:1885 [G] ✔
m:117 [HIS] 1:1271 [G] Bm:117 [HIS] B5:1887 [G] ✔
m:118 [CYS] 1:1268 [G] Bm:118 [THR] B5:1884 [G] ✔
m:118 [CYS] 1:1269 [G] Bm:118 [THR] B5:1885 [G] ✔
m:109 [ASN] 1:1269 [G] Bm:109 [ASN] B5:1885 [G] ✔
m:109 [ASN] 1:1270 [U] Bm:109 [ASN] B5:1886 [U] ✔
m:114 [ALA] 1:1361 [C] Bm:114 [LYS] B5:1977 [U] ✔
m:98 [ARG] 1:1361 [C] Bm:98 [M3L] B5:1977 [U] ❌ 7O7Y_Bm_B5
m:98 [ARG] 1:1362 [G] Bm:98 [M3L] B5:1978 [G] ❌ 7O7Y_Bm_B5
m:114 [ALA] 1:1362 [G] Bm:114 [LYS] B5:1978 [G] ❌ 6AZ3_m_1
m:119 [SER] 1:1268 [G] Bm:119 [ASN] B5:1884 [G] ❌ 6AZ3_m_1
m:98 [ARG] 1:1267 [G] Bm:98 [M3L] B5:1883 [A] ❌ 7O7Y_B5:1883 no longer at interface
m:113 [LYS] 1:1249 [A] Bm:113 [LYS] B5:1868 [A] ❌ 6AZ3_1:1249 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Rubredoxin-related Eukaryotic large subunit ribosomal RNA 0.92 0.82 0.50 0.92 0.91 1.0 0.88 0.90 0.75 0.25 0.33


Other pairs involving 6AZ3_m_1 or 7O7Y_Bm_B5

Total number of entries: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_m_2 7O7Y_Bm_B5 0.92 0.91 0.53 0.67 Rubredoxin-related Eukaryotic large subunit ribosomal RNA compare
6AZ3_m_4 7O7Y_Bm_B5 0.86 0.88 0.56 0.75 Rubredoxin-related Eukaryotic large subunit ribosomal RNA compare
6AZ3_m_1 7O7Y_Bm_B5 0.90 0.92 0.82 0.5 Rubredoxin-related Eukaryotic large subunit ribosomal RNA compare