RNAprotDB

Contacts -

6AZ3_m	6AZ3_2	Distance	Base Pair	Hbond nuc:res	Base Stacking	Residue conservation
m:95 [VAL]	2:1335 [C]	3.78	2:1344 [A]			90.07
m:95 [VAL]	2:1336 [C]	4.71	2:1343 [G]			90.07
m:97 [ARG]	2:1285 [U]	3.06			base/AA stacks	90.6
m:97 [ARG]	2:1286 [A]	3.88	2:1280 [G]			90.6
m:98 [ARG]	2:1274 [C]	4.39	2:1292 [G]			48.39
m:99 [CYS]	2:1334 [G]	4.4	2:1345 [C]			78.6
m:99 [CYS]	2:1346 [G]	4.85	2:1333 [C]			78.6
m:100 [TYR]	2:1286 [A]	4.42	2:1280 [G]			62.7
m:100 [TYR]	2:1287 [G]	2.37	2:1279 [C]			62.7
m:100 [TYR]	2:1334 [G]	2.24	2:1345 [C]	sugar:BB		62.7
m:100 [TYR]	2:1335 [C]	3.56	2:1344 [A]			62.7
m:100 [TYR]	2:1345 [C]	3.0	2:1334 [G]	sugar:SC		62.7
m:100 [TYR]	2:1346 [G]	3.71	2:1333 [C]			62.7
m:101 [ALA]	2:1334 [G]	4.13	2:1345 [C]			84.0
m:101 [ALA]	2:1335 [C]	4.23	2:1344 [A]			84.0
m:102 [ARG]	2:1334 [G]	3.72	2:1345 [C]			56.7
m:102 [ARG]	2:1335 [C]	2.81	2:1344 [A]			56.7
m:120 [ASN]	2:1285 [U]	4.0				46.82
m:122 [ARG]	2:1286 [A]	3.38	2:1280 [G]			83.9
m:122 [ARG]	2:1335 [C]	2.96	2:1344 [A]			83.9
m:122 [ARG]	2:1336 [C]	3.07	2:1343 [G]			83.9
m:124 [LYS]	2:1335 [C]	3.98	2:1344 [A]			78.39
m:124 [LYS]	2:1336 [C]	2.85	2:1343 [G]			78.39
m:124 [LYS]	2:1338 [C]	4.24				78.39
m:125 [LYS]	2:1286 [A]	3.34	2:1280 [G]			59.31
m:125 [LYS]	2:1336 [C]	3.1	2:1343 [G]			59.31
m:125 [LYS]	2:1337 [G]	2.46	2:1283 [C]	base:SC		59.31
m:126 [LYS]	2:1337 [G]	3.82	2:1283 [C]			4.37
m:127 [LEU]	2:1339 [A]	4.09	4:57 [A]			0.0

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

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