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All interfaces > All interologs > Interface groups > group68 > 6AZ3_m_2 vs 7O7Y_Bm_B5

Interface analysis


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Common contacts -

6AZ3_m
6AZ3_2
7O7Y_Bm
7O7Y_B5
Conserved?
m:122 [ARG] 2:1286 [A] Bm:122 [ARG] B5:4170 [A] ✔
m:122 [ARG] 2:1335 [C] Bm:122 [ARG] B5:4219 [A] ✔
m:122 [ARG] 2:1336 [C] Bm:122 [ARG] B5:4220 [A] ✔
m:127 [LEU] 2:1339 [A] Bm:127 [VAL] B5:4223 [A] ✔
m:98 [ARG] 2:1274 [C] Bm:98 [M3L] B5:4158 [C] ✔
m:125 [LYS] 2:1286 [A] Bm:125 [LYS] B5:4170 [A] ✔
m:125 [LYS] 2:1336 [C] Bm:125 [LYS] B5:4220 [A] ✔
m:125 [LYS] 2:1337 [G] Bm:125 [LYS] B5:4221 [G] ✔
m:97 [ARG] 2:1285 [U] Bm:97 [ARG] B5:4169 [PSU] ✔
m:97 [ARG] 2:1286 [A] Bm:97 [ARG] B5:4170 [A] ✔
m:102 [ARG] 2:1334 [G] Bm:102 [ARG] B5:4218 [G] ✔
m:102 [ARG] 2:1335 [C] Bm:102 [ARG] B5:4219 [A] ✔
m:95 [VAL] 2:1335 [C] Bm:95 [ILE] B5:4219 [A] ✔
m:95 [VAL] 2:1336 [C] Bm:95 [ILE] B5:4220 [A] ✔
m:100 [TYR] 2:1286 [A] Bm:100 [TYR] B5:4170 [A] ✔
m:100 [TYR] 2:1287 [G] Bm:100 [TYR] B5:4171 [G] ✔
m:100 [TYR] 2:1334 [G] Bm:100 [TYR] B5:4218 [G] ✔
m:100 [TYR] 2:1335 [C] Bm:100 [TYR] B5:4219 [A] ✔
m:100 [TYR] 2:1345 [C] Bm:100 [TYR] B5:4229 [C] ✔
m:100 [TYR] 2:1346 [G] Bm:100 [TYR] B5:4230 [A] ✔
m:126 [LYS] 2:1337 [G] Bm:126 [LYS] B5:4221 [G] ✔
m:101 [ALA] 2:1334 [G] Bm:101 [ALA] B5:4218 [G] ✔
m:99 [CYS] 2:1334 [G] Bm:99 [CYS] B5:4218 [G] ✔
m:99 [CYS] 2:1346 [G] Bm:99 [CYS] B5:4230 [A] ✔
m:124 [LYS] 2:1335 [C] Bm:124 [LYS] B5:4219 [A] ✔
m:124 [LYS] 2:1336 [C] Bm:124 [LYS] B5:4220 [A] ✔
m:124 [LYS] 2:1338 [C] Bm:124 [LYS] B5:4222 [C] ✔
m:120 [ASN] 2:1285 [U] Bm:120 [ASN] B5:4169 [PSU] ❌ 7O7Y_Bm_B5
m:101 [ALA] 2:1335 [C] Bm:101 [ALA] B5:4219 [A] ❌ 7O7Y_Bm_B5
m:98 [ARG] 2:1346 [G] Bm:98 [M3L] B5:4230 [A] ❌ 6AZ3_m_2
m:114 [ALA] 2:1347 [C] Bm:114 [LYS] B5:4231 [C] ❌ 6AZ3_m:114, 6AZ3_2:1347 no longer at interface
m:120 [ASN] 2:1275 [C] Bm:120 [ASN] B5:4159 [C] ❌ 6AZ3_2:1275 no longer at interface
m:98 [ARG] 2:1275 [C] Bm:98 [M3L] B5:4159 [C] ❌ 6AZ3_2:1275 no longer at interface
m:123 [MET] 2:1336 [C] Bm:123 [PRO] B5:4220 [A] ❌ 6AZ3_m:123 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Rubredoxin-related Eukaryotic large subunit ribosomal RNA 0.91 0.53 0.67 0.92 0.9 1.0 1.0 0.92 0.91 0.75 0.57


Other pairs involving 6AZ3_m_2 or 7O7Y_Bm_B5

Total number of entries: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_m_2 7O7Y_Bm_B5 0.92 0.91 0.53 0.67 Rubredoxin-related Eukaryotic large subunit ribosomal RNA compare
6AZ3_m_4 7O7Y_Bm_B5 0.86 0.88 0.56 0.75 Rubredoxin-related Eukaryotic large subunit ribosomal RNA compare
6AZ3_m_1 7O7Y_Bm_B5 0.90 0.92 0.82 0.5 Rubredoxin-related Eukaryotic large subunit ribosomal RNA compare