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All interfaces > All interologs > Interface groups > group68 > 6AZ3_m_4 vs 7O7Y_Bm_B5

Interface analysis


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Licorice
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Common contacts -

6AZ3_m
6AZ3_4
7O7Y_Bm
7O7Y_B5
Conserved?
m:106 [ARG] 4:146 [C] Bm:106 [ARG] B5:4442 [C] ✔
m:112 [LYS] 4:135 [C] Bm:112 [LYS] B5:4431 [U] ✔
m:112 [LYS] 4:136 [G] Bm:112 [LYS] B5:4432 [G] ✔
m:112 [LYS] 4:148 [C] Bm:112 [LYS] B5:4444 [C] ✔
m:93 [LYS] 4:137 [G] Bm:93 [LYS] B5:4433 [A] ✔
m:102 [ARG] 4:136 [G] Bm:102 [ARG] B5:4432 [G] ✔
m:102 [ARG] 4:137 [G] Bm:102 [ARG] B5:4433 [A] ✔
m:102 [ARG] 4:148 [C] Bm:102 [ARG] B5:4444 [C] ✔
m:104 [PRO] 4:147 [U] Bm:104 [HIS] B5:4443 [U] ✔
m:104 [PRO] 4:148 [C] Bm:104 [HIS] B5:4444 [C] ✔
m:111 [ARG] 4:147 [U] Bm:111 [ARG] B5:4443 [U] ✔
m:111 [ARG] 4:148 [C] Bm:111 [ARG] B5:4444 [C] ✔
m:111 [ARG] 4:149 [U] Bm:111 [ARG] B5:4445 [U] ✔
m:100 [TYR] 4:136 [G] Bm:100 [TYR] B5:4432 [G] ✔
m:117 [HIS] 4:150 [A] Bm:117 [HIS] B5:4446 [A] ✔
m:101 [ALA] 4:136 [G] Bm:101 [ALA] B5:4432 [G] ✔
m:89 [TYR] 4:137 [G] Bm:89 [TYR] B5:4433 [A] ✔
m:111 [ARG] 4:150 [A] Bm:111 [ARG] B5:4446 [A] ❌ 7O7Y_Bm_B5
m:99 [CYS] 4:135 [C] Bm:99 [CYS] B5:4431 [U] ❌ 7O7Y_Bm_B5
m:104 [PRO] 4:146 [C] Bm:104 [HIS] B5:4442 [C] ❌ 6AZ3_m_4
m:106 [ARG] 4:145 [C] Bm:106 [ARG] B5:4441 [C] ❌ 6AZ3_4:145 no longer at interface
m:114 [ALA] 4:134 [U] Bm:114 [LYS] B5:4430 [A] ❌ 6AZ3_m:114, 6AZ3_4:134 no longer at interface
m:114 [ALA] 4:135 [C] Bm:114 [LYS] B5:4431 [U] ❌ 6AZ3_m:114 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Rubredoxin-related Eukaryotic large subunit ribosomal RNA 0.88 0.56 0.75 0.92 0.84 1.0 1.0 0.86 0.79 0.36 0.50


Other pairs involving 6AZ3_m_4 or 7O7Y_Bm_B5

Total number of entries: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_m_2 7O7Y_Bm_B5 0.92 0.91 0.53 0.67 Rubredoxin-related Eukaryotic large subunit ribosomal RNA compare
6AZ3_m_4 7O7Y_Bm_B5 0.86 0.88 0.56 0.75 Rubredoxin-related Eukaryotic large subunit ribosomal RNA compare
6AZ3_m_1 7O7Y_Bm_B5 0.90 0.92 0.82 0.5 Rubredoxin-related Eukaryotic large subunit ribosomal RNA compare