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All interfaces > All interologs > Interface groups > group7 > 3FOZ_B_D

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Licorice
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Licorice
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Chain
Chain (with hetatm)
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Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

3FOZ_B
3FOZ_D
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
B:42 [ASP] D:37 [A] 3.05 base:SC, base:SC 99.0
B:43 [SER] D:36 [A] 3.71 95.33
B:43 [SER] D:37 [A] 2.6 95.33
B:44 [ALA] D:37 [A] 3.56 73.59
B:45 [LEU] D:37 [A] 4.37 92.16
B:47 [TYR] D:36 [A] 4.61 91.24
B:53 [GLY] D:37 [A] 3.93 90.38
B:54 [THR] D:37 [A] 3.03 base:BB 94.1
B:78 [ALA] D:35 [A] 4.69 43.56
B:79 [TYR] D:35 [A] 3.2 56.06
B:79 [TYR] D:36 [A] 3.96 56.06
B:80 [SER] D:34 [G] 3.57 85.42
B:80 [SER] D:35 [A] 3.88 85.42
B:80 [SER] D:36 [A] 4.09 85.42
B:81 [ALA] D:34 [G] 4.29 83.62
B:81 [ALA] D:36 [A] 4.48 83.62
B:82 [ALA] D:34 [G] 3.15 sugar:BB 46.06
B:107 [GLY] D:37 [A] 3.63 98.95
B:108 [THR] D:36 [A] 3.66 92.0
B:108 [THR] D:37 [A] 2.78 92.0
B:109 [MET] D:37 [A] 4.54 83.87
B:110 [LEU] D:32 [U] 3.38 D:38 [A] 82.9
B:110 [LEU] D:33 [U] 4.15 82.9
B:110 [LEU] D:36 [A] 3.23 82.9
B:111 [TYR] D:36 [A] 2.75 98.08
B:113 [LYS] D:32 [U] 4.96 D:38 [A] 58.61
B:119 [LEU] D:33 [U] 3.37 60.84
B:119 [LEU] D:34 [G] 3.95 60.84
B:120 [SER] D:33 [U] 2.64 base:BB, base:SC 59.21
B:120 [SER] D:34 [G] 2.84 base:BB 59.21
B:121 [PRO] D:34 [G] 3.61 23.04
B:122 [LEU] D:33 [U] 3.51 44.08
B:122 [LEU] D:34 [G] 3.1 base:BB 44.08
B:123 [PRO] D:34 [G] 4.11 75.54
B:124 [SER] D:34 [G] 3.75 36.99
B:125 [ALA] D:34 [G] 3.56 48.33
B:125 [ALA] D:35 [A] 3.47 48.33
B:130 [ARG] D:34 [G] 4.86 85.89
B:130 [ARG] D:35 [A] 2.69 base/AA stacks 85.89
B:134 [GLU] D:35 [A] 4.62 34.82
B:159 [ARG] D:33 [U] 4.38 45.8
B:161 [HIS] D:40 [C] 3.84 D:30 [G] 70.43
B:161 [HIS] D:41 [C] 3.63 D:29 [G] 70.43
B:163 [ASN] D:39 [U] 4.89 D:31 [A] 75.41
B:163 [ASN] D:40 [C] 3.03 D:30 [G] 75.41
B:163 [ASN] D:41 [C] 3.17 D:29 [G] 75.41
B:164 [ASP] D:39 [U] 2.62 D:31 [A] sugar:SC 90.64
B:164 [ASP] D:40 [C] 3.89 D:30 [G] 90.64
B:165 [PRO] D:39 [U] 3.66 D:31 [A] 48.83
B:165 [PRO] D:40 [C] 3.58 D:30 [G] 48.83
B:166 [GLN] D:35 [A] 3.42 sugar:SC base/AA stacks 72.33
B:166 [GLN] D:36 [A] 3.36 base:SC 72.33
B:166 [GLN] D:38 [A] 2.72 D:32 [U] base:SC, sugar:SC 72.33
B:166 [GLN] D:39 [U] 3.54 D:31 [A] sugar:BB 72.33
B:167 [ARG] D:31 [A] 3.61 D:39 [U] 97.14
B:167 [ARG] D:32 [U] 3.32 D:38 [A] 97.14
B:167 [ARG] D:33 [U] 3.22 97.14
B:167 [ARG] D:36 [A] 3.45 97.14
B:167 [ARG] D:38 [A] 3.23 D:32 [U] base:SC 97.14
B:167 [ARG] D:39 [U] 2.64 D:31 [A] base:SC 97.14
B:169 [SER] D:35 [A] 4.86 60.82
B:170 [ARG] D:34 [G] 2.75 98.48
B:170 [ARG] D:35 [A] 4.61 98.48
B:182 [LEU] D:33 [U] 4.88 45.39
B:186 [THR] D:33 [U] 3.66 42.86
B:207 [ARG] D:28 [G] 2.85 D:42 [C] 81.08
B:207 [ARG] D:29 [G] 3.1 D:41 [C] 81.08
B:211 [HIS] D:27 [G] 3.4 D:43 [C] 54.31
B:211 [HIS] D:28 [G] 2.87 D:42 [C] 54.31
B:242 [ASP] D:35 [A] 3.76 65.36
B:244 [PRO] D:35 [A] 3.99 63.75
B:244 [PRO] D:36 [A] 3.71 63.75
B:244 [PRO] D:37 [A] 4.55 63.75
B:247 [ARG] D:35 [A] 4.06 55.98
B:247 [ARG] D:37 [A] 4.0 55.98
B:247 [ARG] D:38 [A] 3.22 D:32 [U] sugar:SC 55.98
B:247 [ARG] D:39 [U] 3.57 D:31 [A] 55.98
B:248 [CYS] D:37 [A] 3.25 79.05
B:249 [VAL] D:37 [A] 3.4 base:BB 88.57
B:249 [VAL] D:38 [A] 4.27 D:32 [U] 88.57
B:252 [ARG] D:38 [A] 3.26 D:32 [U] 60.99
B:252 [ARG] D:39 [U] 2.99 D:31 [A] 60.99
B:269 [TYR] D:10 [G] 4.99 D:25 [C] 60.43
B:269 [TYR] D:25 [C] 3.73 D:10 [G] sugar:SC 60.43
B:269 [TYR] D:26 [A] 3.34 D:44 [G] sugar:SC 60.43
B:270 [ARG] D:25 [C] 3.07 D:10 [G] sugar:SC 23.93
B:270 [ARG] D:26 [A] 4.28 D:44 [G] 23.93
B:273 [CYS] D:26 [A] 3.74 D:44 [G] 2.65
B:273 [CYS] D:27 [G] 3.95 D:43 [C] 2.65
B:276 [ARG] D:26 [A] 3.25 D:44 [G] 80.85
B:276 [ARG] D:27 [G] 2.83 D:43 [C] 80.85
B:277 [GLN] D:26 [A] 3.13 D:44 [G] 69.65
B:277 [GLN] D:27 [G] 2.8 D:43 [C] 69.65
B:278 [LEU] D:37 [A] 3.12 74.41
B:280 [LYS] D:28 [G] 3.29 D:42 [C] 90.64
B:280 [LYS] D:29 [G] 2.98 D:41 [C] 90.64
B:280 [LYS] D:30 [G] 4.49 D:40 [C] 90.64
B:281 [ARG] D:30 [G] 4.3 D:40 [C] 89.77
B:281 [ARG] D:31 [A] 3.49 D:39 [U] 89.77
B:281 [ARG] D:32 [U] 4.63 D:38 [A] 89.77
B:281 [ARG] D:37 [A] 4.34 89.77
B:281 [ARG] D:38 [A] 2.28 D:32 [U] 89.77
B:281 [ARG] D:39 [U] 3.14 D:31 [A] base:SC 89.77
B:281 [ARG] D:40 [C] 4.0 D:30 [G] 89.77
B:282 [GLN] D:37 [A] 4.49 99.0
B:284 [THR] D:30 [G] 2.84 D:40 [C] 93.23
B:284 [THR] D:31 [A] 3.59 D:39 [U] 93.23
B:284 [THR] D:32 [U] 3.58 D:38 [A] 93.23
B:285 [TRP] D:32 [U] 3.42 D:38 [A] base/AA stacks 84.14
B:285 [TRP] D:36 [A] 4.54 84.14
B:287 [ARG] D:29 [G] 2.61 D:41 [C] 86.1
B:287 [ARG] D:30 [G] 3.5 D:40 [C] 86.1

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group7 3FOZ_B_D B: tRNA delta(2)-isopentenylpyrophosphate transferase, Escherichia coli k-12 (genetically engineered) D: tRNA(phe) P16384 P-loop containing nucleoside triphosphate hydrolases & tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain tRNA ✘

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
3FOZ_A_C 3FOZ_B_D 0.99 0.96 0.61 1.0 P-loop containing nucleoside triphosphate hydrolases & tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain tRNA compare