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All interfaces > All interologs > Interface groups > group70 > 6AZ3_p_1 vs 7O7Y_Bo_B5

Interface analysis


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Common contacts -

6AZ3_p
6AZ3_1
7O7Y_Bo
7O7Y_B5
Conserved?
p:38 [ARG] 1:320 [G] Bo:36 [GLN] B5:294 [G] ✔
p:38 [ARG] 1:321 [A] Bo:36 [GLN] B5:295 [A] ✔
p:55 [LYS] 1:91 [G] Bo:53 [MLZ] B5:91 [G] ✔
p:55 [LYS] 1:92 [C] Bo:53 [MLZ] B5:92 [C] ✔
p:46 [LYS] 1:42 [U] Bo:44 [LYS] B5:43 [U] ✔
p:46 [LYS] 1:90 [G] Bo:44 [LYS] B5:90 [G] ✔
p:46 [LYS] 1:91 [G] Bo:44 [LYS] B5:91 [G] ✔
p:53 [GLN] 1:41 [A] Bo:51 [GLN] B5:42 [A] ✔
p:53 [GLN] 1:42 [U] Bo:51 [GLN] B5:43 [U] ✔
p:48 [SER] 1:314 [G] Bo:46 [SER] B5:288 [G] ✔
p:48 [SER] 1:315 [U] Bo:46 [SER] B5:289 [C] ✔
p:45 [ARG] 1:320 [G] Bo:43 [ARG] B5:294 [G] ✔
p:51 [GLY] 1:41 [A] Bo:49 [GLY] B5:42 [A] ✔
p:51 [GLY] 1:42 [U] Bo:49 [GLY] B5:43 [U] ✔
p:56 [PRO] 1:91 [G] Bo:54 [PRO] B5:91 [G] ✔
p:41 [ARG] 1:321 [A] Bo:39 [ARG] B5:295 [A] ✔
p:54 [THR] 1:42 [U] Bo:52 [THR] B5:43 [U] ✔
p:54 [THR] 1:91 [G] Bo:52 [THR] B5:91 [G] ✔
p:36 [PHE] 1:321 [A] Bo:34 [TYR] B5:295 [A] ✔
p:50 [TYR] 1:314 [G] Bo:48 [TYR] B5:288 [G] ✔
p:50 [TYR] 1:315 [U] Bo:48 [TYR] B5:289 [C] ✔
p:49 [GLY] 1:314 [G] Bo:47 [GLY] B5:288 [G] ✔
p:49 [GLY] 1:315 [U] Bo:47 [GLY] B5:289 [C] ✔
p:42 [ARG] 1:90 [G] Bo:40 [ARG] B5:90 [G] ✔
p:42 [ARG] 1:91 [G] Bo:40 [ARG] B5:91 [G] ✔
p:42 [ARG] 1:92 [C] Bo:40 [ARG] B5:92 [C] ✔
p:38 [ARG] 1:89 [C] Bo:36 [GLN] B5:89 [C] ❌ 7O7Y_Bo_B5
p:45 [ARG] 1:89 [C] Bo:43 [ARG] B5:89 [C] ❌ 7O7Y_Bo_B5
p:45 [ARG] 1:90 [G] Bo:43 [ARG] B5:90 [G] ❌ 7O7Y_Bo_B5
p:45 [ARG] 1:321 [A] Bo:43 [ARG] B5:295 [A] ❌ 7O7Y_Bo_B5
p:41 [ARG] 1:320 [G] Bo:39 [ARG] B5:294 [G] ❌ 6AZ3_p_1
p:42 [ARG] 1:89 [C] Bo:40 [ARG] B5:89 [C] ❌ 6AZ3_p_1
p:42 [ARG] 1:320 [G] Bo:40 [ARG] B5:294 [G] ❌ 6AZ3_p_1
p:46 [LYS] 1:43 [A] Bo:44 [LYS] B5:44 [A] ❌ 7O7Y_B5:44 no longer at interface
p:45 [ARG] 1:322 [A] Bo:43 [ARG] B5:296 [A] ❌ 6AZ3_1:322 no longer at interface
p:45 [ARG] 1:316 [U] Bo:43 [ARG] B5:290 [U] ❌ 6AZ3_1:316 no longer at interface
p:45 [ARG] 1:317 [U] Bo:43 [ARG] B5:291 [U] ❌ 6AZ3_1:317 no longer at interface
p:45 [ARG] 1:323 [U] Bo:43 [ARG] B5:297 [U] ❌ 6AZ3_1:323 no longer at interface
p:60 [LYS] 1:1010 [C] Bo:58 [LYS] B5:1631 [C] ❌ 6AZ3_p:60, 6AZ3_1:1010 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Rubredoxin-related Eukaryotic large subunit ribosomal RNA 0.92 0.53 0.79 0.92 0.91 1.0 0.91 0.86 0.95 0.21 0.46


Other pairs involving 6AZ3_p_1 or 7O7Y_Bo_B5

Total number of entries: 6

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_p_2 7O7Y_Bo_B5 0.92 0.91 1.03 0.58 Rubredoxin-related Eukaryotic large subunit ribosomal RNA compare
1VQ8_3_0 6AZ3_p_1 0.72 0.77 2.21 0.43 Rubredoxin-related compare
1VQ8_3_0 7O7Y_Bo_B5 0.67 0.94 2.37 0.21 Rubredoxin-related compare
1YHQ_3_0 7O7Y_Bo_B5 0.67 0.94 2.39 0.21 Rubredoxin-related compare
1YHQ_3_0 6AZ3_p_1 0.71 0.77 2.21 0.43 Rubredoxin-related compare
6AZ3_p_1 7O7Y_Bo_B5 0.86 0.92 0.53 0.79 Rubredoxin-related Eukaryotic large subunit ribosomal RNA compare