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All interfaces > All interologs > Interface groups > group71 > 6AZ3_P_1

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
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Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

6AZ3_P
6AZ3_1
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
P:2 [GLY] 1:1216 [U] 3.71 0.0
P:2 [GLY] 1:1217 [U] 3.1 1:1201 [U] 0.0
P:2 [GLY] 1:1402 [U] 4.39 1:1224 [A] 0.0
P:2 [GLY] 1:1403 [A] 3.6 1:1223 [U] 0.0
P:2 [GLY] 1:1456 [A] 4.6 1:1409 [U] 0.0
P:3 [VAL] 1:1159 [A] 4.81 0.0
P:3 [VAL] 1:1403 [A] 4.96 1:1223 [U] 0.0
P:3 [VAL] 1:1455 [G] 3.83 1:1410 [U] 0.0
P:3 [VAL] 1:1456 [A] 4.29 1:1409 [U] 0.0
P:5 [LEU] 1:1159 [A] 4.69 0.0
P:5 [LEU] 1:1455 [G] 3.73 1:1410 [U] 0.0
P:8 [ILE] 1:1159 [A] 3.53 0.0
P:8 [ILE] 1:1160 [G] 4.89 0.0
P:9 [SER] 1:1000 [C] 3.52 1:1461 [G] 0.0
P:9 [SER] 1:1001 [G] 3.93 1:1460 [A] 0.0
P:10 [LYS] 1:1020 [C] 4.71 1:1170 [G] 0.0
P:10 [LYS] 1:1021 [U] 2.56 1:1168 [A] 0.0
P:10 [LYS] 1:1022 [G] 4.46 1:1167 [C] 0.0
P:11 [LYS] 1:1159 [A] 3.15 0.0
P:11 [LYS] 1:1160 [G] 2.46 0.0
P:11 [LYS] 1:1161 [A] 2.94 1:1413 [U] 0.0
P:11 [LYS] 1:1413 [U] 3.17 1:1161 [A] 0.0
P:12 [SER] 1:1413 [U] 3.53 1:1161 [A] 0.0
P:13 [ARG] 1:1026 [C] 4.2 1:1163 [G] 0.0
P:13 [ARG] 1:1027 [U] 3.01 1:1162 [G] base:SC 0.0
P:13 [ARG] 1:1161 [A] 2.96 1:1413 [U] base/AA stacks 0.0
P:13 [ARG] 1:1162 [G] 2.46 1:1027 [U] base:SC, base:SC 0.0
P:13 [ARG] 1:1163 [G] 4.11 1:1026 [C] 0.0
P:13 [ARG] 1:1413 [U] 3.19 1:1161 [A] sugar:BB 0.0
P:14 [VAL] 1:1024 [U] 3.94 1:1165 [A] 0.0
P:14 [VAL] 1:1025 [G] 3.3 1:1164 [C] 0.0
P:14 [VAL] 1:1026 [C] 4.21 1:1163 [G] 0.0
P:15 [ILE] 1:1026 [C] 4.99 1:1163 [G] 0.0
P:15 [ILE] 1:1161 [A] 4.87 1:1413 [U] 0.0
P:15 [ILE] 1:1413 [U] 3.57 1:1161 [A] 0.0
P:15 [ILE] 1:1414 [A] 3.27 1:1452 [U] 0.0
P:16 [ARG] 1:703 [C] 4.94 1:842 [G] 0.0
P:16 [ARG] 1:1024 [U] 4.97 1:1165 [A] 0.0
P:16 [ARG] 1:1025 [G] 2.98 1:1164 [C] 0.0
P:16 [ARG] 1:1026 [C] 4.86 1:1163 [G] 0.0
P:17 [HIS] 1:1413 [U] 4.9 1:1161 [A] 0.0
P:17 [HIS] 1:1414 [A] 2.45 1:1452 [U] 0.0
P:18 [HIS] 1:1443 [U] 3.42 base/AA stacks 0.0
P:20 [TYR] 1:703 [C] 3.64 1:842 [G] 0.0
P:20 [TYR] 1:704 [G] 3.27 1:841 [U] 0.0
P:20 [TYR] 1:1024 [U] 4.65 1:1165 [A] 0.0
P:20 [TYR] 1:1025 [G] 3.12 1:1164 [C] 0.0
P:21 [SER] 1:704 [G] 3.38 1:841 [U] 0.0
P:21 [SER] 1:705 [C] 3.24 1:840 [G] 0.0
P:22 [THR] 1:704 [G] 3.09 1:841 [U] sugar:SC 0.0
P:22 [THR] 1:705 [C] 3.64 1:840 [G] 0.0
P:23 [ASN] 1:704 [G] 4.87 1:841 [U] 0.0
P:23 [ASN] 1:705 [C] 3.64 1:840 [G] 0.0
P:23 [ASN] 1:706 [G] 4.45 1:839 [U] 0.0
P:26 [ILE] 1:705 [C] 4.29 1:840 [G] 0.0
P:30 [ILE] 1:1442 [G] 4.02 1:1419 [C] 0.0
P:31 [LYS] 1:1441 [A] 3.39 0.0
P:31 [LYS] 1:1442 [G] 3.71 1:1419 [C] 0.0
P:34 [LYS] 1:1441 [A] 3.88 0.0
P:34 [LYS] 1:1442 [G] 3.05 1:1419 [C] 0.0
P:34 [LYS] 1:1443 [U] 4.44 0.0
P:35 [PHE] 1:1441 [A] 3.5 0.0
P:38 [LYS] 1:1419 [C] 4.9 1:1442 [G] 0.0
P:38 [LYS] 1:1441 [A] 4.66 0.0
P:38 [LYS] 1:1442 [G] 3.67 1:1419 [C] base:SC 0.0
P:39 [ARG] 1:1441 [A] 4.97 0.0
P:42 [SER] 1:780 [C] 4.25 1:801 [G] 0.0
P:43 [GLY] 1:779 [A] 3.67 1:802 [C] 0.0
P:43 [GLY] 1:780 [C] 3.57 1:801 [G] 0.0
P:44 [PHE] 1:779 [A] 3.17 1:802 [C] 0.0
P:44 [PHE] 1:780 [C] 3.5 1:801 [G] 0.0
P:47 [VAL] 1:778 [C] 3.93 0.0
P:47 [VAL] 1:779 [A] 4.27 1:802 [C] 0.0
P:51 [ARG] 1:778 [C] 3.5 0.0
P:51 [ARG] 1:804 [C] 4.91 0.0
P:51 [ARG] 1:1028 [A] 4.97 0.0
P:54 [LYS] 1:704 [G] 4.76 1:841 [U] 0.0
P:54 [LYS] 1:1026 [C] 3.51 1:1163 [G] 0.0
P:54 [LYS] 1:1027 [U] 3.2 1:1162 [G] 0.0
P:55 [SER] 1:703 [C] 2.84 1:842 [G] 0.0
P:55 [SER] 1:704 [G] 3.53 1:841 [U] 0.0
P:56 [ARG] 1:704 [G] 3.07 1:841 [U] 0.0
P:56 [ARG] 1:705 [C] 3.0 1:840 [G] base/AA stacks 0.0
P:56 [ARG] 1:706 [G] 3.19 1:839 [U] base:SC, base:SC 0.0
P:56 [ARG] 1:707 [C] 3.03 1:838 [G] base:SC 0.0
P:56 [ARG] 1:708 [A] 4.82 0.0
P:56 [ARG] 1:838 [G] 3.48 1:707 [C] base:SC 0.0
P:56 [ARG] 1:839 [U] 4.29 1:706 [G] 0.0
P:56 [ARG] 1:840 [G] 4.71 1:705 [C] 0.0
P:57 [SER] 1:702 [A] 4.66 1:843 [C] 0.0
P:57 [SER] 1:703 [C] 3.62 1:842 [G] 0.0
P:57 [SER] 1:704 [G] 4.59 1:841 [U] 0.0
P:58 [ASN] 1:703 [C] 3.35 1:842 [G] 0.0
P:58 [ASN] 1:1025 [G] 4.17 1:1164 [C] 0.0
P:58 [ASN] 1:1026 [C] 3.41 1:1163 [G] 0.0
P:59 [ARG] 1:705 [C] 4.46 1:840 [G] 0.0
P:61 [PRO] 1:708 [A] 3.64 0.0
P:62 [ILE] 1:804 [C] 4.84 0.0
P:63 [SER] 1:835 [G] 4.86 0.0
P:63 [SER] 1:836 [G] 2.96 0.0
P:65 [SER] 1:835 [G] 2.75 sugar:SC 0.0
P:65 [SER] 1:836 [G] 4.54 0.0
P:66 [ARG] 1:771 [U] 2.71 base:SC, sugar:SC 0.0
P:66 [ARG] 1:804 [C] 3.29 0.0
P:66 [ARG] 1:805 [A] 3.34 1:777 [G] 0.0
P:66 [ARG] 1:835 [G] 3.48 0.0
P:66 [ARG] 1:836 [G] 3.92 0.0
P:68 [ALA] 1:770 [G] 3.13 0.0
P:69 [VAL] 1:770 [G] 3.82 0.0
P:69 [VAL] 1:771 [U] 3.64 0.0
P:69 [VAL] 1:835 [G] 4.23 0.0
P:70 [VAL] 1:771 [U] 3.69 0.0
P:70 [VAL] 1:802 [C] 4.59 1:779 [A] 0.0
P:70 [VAL] 1:804 [C] 3.69 0.0
P:72 [LYS] 1:769 [U] 2.63 sugar:SC 0.0
P:72 [LYS] 1:770 [G] 3.37 0.0
P:72 [LYS] 1:771 [U] 4.98 0.0
P:73 [ARG] 1:771 [U] 2.78 sugar:SC base/AA stacks 0.0
P:73 [ARG] 1:773 [G] 3.96 1:809 [C] 0.0
P:73 [ARG] 1:802 [C] 3.33 1:779 [A] 0.0
P:73 [ARG] 1:803 [C] 2.65 0.0
P:74 [LYS] 1:779 [A] 3.94 1:802 [C] base:SC 0.0
P:74 [LYS] 1:780 [C] 3.98 1:801 [G] 0.0
P:74 [LYS] 1:801 [G] 3.53 1:780 [C] 0.0
P:74 [LYS] 1:802 [C] 2.94 1:779 [A] base:SC 0.0
P:77 [PHE] 1:801 [G] 3.59 1:780 [C] 0.0
P:77 [PHE] 1:802 [C] 3.65 1:779 [A] 0.0
P:82 [LYS] 1:781 [A] 3.59 1:800 [U] 0.0
P:82 [LYS] 1:782 [C] 4.89 1:799 [U] 0.0
P:92 [ASP] 1:708 [A] 2.78 base:SC 0.0
P:94 [LEU] 1:708 [A] 3.57 0.0
P:94 [LEU] 1:709 [A] 3.03 1:741 [G] 0.0
P:94 [LEU] 1:836 [G] 3.97 0.0
P:94 [LEU] 1:837 [A] 3.42 0.0
P:95 [ASP] 1:709 [A] 3.3 1:741 [G] 0.0
P:95 [ASP] 1:836 [G] 2.6 base:BB, base:BB 0.0
P:95 [ASP] 1:837 [A] 4.45 0.0
P:96 [ASP] 1:835 [G] 3.65 0.0
P:96 [ASP] 1:836 [G] 3.4 0.0
P:97 [VAL] 1:709 [A] 3.79 1:741 [G] 0.0
P:97 [VAL] 1:710 [G] 3.61 1:740 [C] 0.0
P:97 [VAL] 1:836 [G] 3.0 base:BB 0.0
P:98 [ARG] 1:835 [G] 3.23 0.0
P:98 [ARG] 1:836 [G] 3.22 sugar:SC base/AA stacks 0.0
P:99 [MET] 1:770 [G] 3.46 0.0
P:99 [MET] 1:835 [G] 3.47 0.0
P:101 [ARG] 1:768 [C] 4.64 1:754 [G] 0.0
P:101 [ARG] 1:769 [U] 3.32 0.0
P:101 [ARG] 1:770 [G] 3.25 base:BB, base:BB 0.0
P:102 [ILE] 1:769 [U] 3.38 0.0
P:102 [ILE] 1:770 [G] 4.3 0.0
P:103 [PRO] 1:769 [U] 3.28 0.0
P:103 [PRO] 1:770 [G] 3.23 0.0
P:111 [ARG] 1:707 [C] 3.55 1:838 [G] 0.0
P:111 [ARG] 1:708 [A] 2.51 base:SC 0.0
P:112 [PHE] 1:708 [A] 4.06 0.0
P:113 [SER] 1:708 [A] 3.58 0.0
P:113 [SER] 1:709 [A] 3.19 1:741 [G] 0.0
P:114 [LYS] 1:707 [C] 2.9 1:838 [G] 0.0
P:114 [LYS] 1:708 [A] 2.92 0.0
P:114 [LYS] 1:711 [G] 4.87 1:739 [U] 0.0
P:115 [SER] 1:708 [A] 4.58 0.0
P:115 [SER] 1:709 [A] 2.74 1:741 [G] 0.0
P:116 [ALA] 1:709 [A] 4.42 1:741 [G] 0.0
P:139 [THR] 1:780 [C] 4.35 1:801 [G] 0.0
P:140 [GLY] 1:780 [C] 3.28 1:801 [G] 0.0
P:141 [LYS] 1:780 [C] 3.8 1:801 [G] 0.0
P:141 [LYS] 1:781 [A] 3.2 1:800 [U] 0.0
P:142 [ASN] 1:780 [C] 3.28 1:801 [G] 0.0
P:142 [ASN] 1:781 [A] 3.64 1:800 [U] 0.0
P:143 [THR] 1:779 [A] 4.34 1:802 [C] 0.0
P:143 [THR] 1:780 [C] 3.35 1:801 [G] sugar:BB 0.0
P:144 [TYR] 1:778 [C] 4.6 0.0
P:144 [TYR] 1:779 [A] 3.41 1:802 [C] 0.0
P:144 [TYR] 1:802 [C] 4.49 1:779 [A] 0.0
P:144 [TYR] 1:803 [C] 2.94 sugar:SC 0.0
P:144 [TYR] 1:804 [C] 3.73 0.0
P:145 [LEU] 1:778 [C] 2.33 base:BB 0.0
P:145 [LEU] 1:779 [A] 4.04 1:802 [C] 0.0
P:145 [LEU] 1:804 [C] 4.12 0.0
P:146 [LEU] 1:778 [C] 4.52 0.0
P:146 [LEU] 1:804 [C] 3.43 0.0
P:147 [ARG] 1:778 [C] 4.3 0.0
P:147 [ARG] 1:804 [C] 3.09 base:SC, sugar:BB 0.0
P:147 [ARG] 1:805 [A] 3.11 1:777 [G] 0.0
P:147 [ARG] 1:1027 [U] 2.94 1:1162 [G] 0.0
P:147 [ARG] 1:1028 [A] 2.49 0.0
P:148 [GLY] 1:804 [C] 4.4 0.0
P:148 [GLY] 1:805 [A] 3.36 1:777 [G] 0.0
P:149 [ARG] 1:805 [A] 3.11 1:777 [G] 0.0
P:149 [ARG] 1:806 [A] 3.64 1:776 [U] 0.0
P:149 [ARG] 1:835 [G] 3.12 0.0
P:149 [ARG] 1:836 [G] 2.42 0.0
P:149 [ARG] 1:837 [A] 4.77 0.0
P:150 [LYS] 1:805 [A] 3.63 1:777 [G] 0.0
P:150 [LYS] 1:806 [A] 3.18 1:776 [U] 0.0
P:150 [LYS] 1:1026 [C] 4.04 1:1163 [G] 0.0
P:151 [SER] 1:805 [A] 4.85 1:777 [G] 0.0
P:151 [SER] 1:806 [A] 2.85 1:776 [U] 0.0
P:151 [SER] 1:807 [C] 4.57 1:775 [G] 0.0
P:151 [SER] 1:837 [A] 4.32 0.0
P:152 [GLY] 1:837 [A] 3.28 0.0
P:152 [GLY] 1:838 [G] 3.88 1:707 [C] 0.0
P:153 [ARG] 1:837 [A] 4.14 0.0
P:153 [ARG] 1:838 [G] 3.15 1:707 [C] 0.0
P:154 [GLU] 1:741 [G] 4.14 1:709 [A] 0.0
P:154 [GLU] 1:837 [A] 4.68 0.0
P:154 [GLU] 1:838 [G] 2.4 1:707 [C] 0.0
P:154 [GLU] 1:839 [U] 3.86 1:706 [G] 0.0
P:155 [SER] 1:701 [G] 3.28 1:844 [C] 0.0
P:155 [SER] 1:838 [G] 4.85 1:707 [C] 0.0
P:157 [ARG] 1:832 [G] 3.88 1:813 [C] 0.0
P:157 [ARG] 1:833 [U] 3.03 1:812 [A] 0.0
P:157 [ARG] 1:834 [U] 4.71 1:811 [G] 0.0
P:157 [ARG] 1:837 [A] 4.53 0.0
P:159 [PHE] 1:701 [G] 3.77 1:844 [C] 0.0
P:159 [PHE] 1:702 [A] 4.4 1:843 [C] 0.0
P:159 [PHE] 1:1165 [A] 4.43 1:1024 [U] 0.0
P:159 [PHE] 1:1166 [C] 3.4 1:1023 [G] 0.0
P:159 [PHE] 1:1167 [C] 4.25 1:1022 [G] 0.0
P:160 [GLY] 1:1166 [C] 4.14 1:1023 [G] 0.0
P:168 [HIS] 1:830 [G] 3.47 1:814 [C] 0.0
P:168 [HIS] 1:831 [C] 3.02 0.0
P:168 [HIS] 1:832 [G] 4.36 1:813 [C] 0.0
P:169 [SER] 1:831 [C] 3.77 0.0
P:170 [LYS] 1:831 [C] 3.51 0.0
P:170 [LYS] 1:832 [G] 3.65 1:813 [C] 0.0
P:171 [PRO] 1:831 [C] 3.42 0.0
P:172 [TYR] 1:699 [C] 4.69 1:846 [G] 0.0
P:172 [TYR] 1:700 [A] 3.53 1:845 [OMU] 0.0
P:172 [TYR] 1:701 [G] 4.13 1:844 [C] 0.0
P:172 [TYR] 1:1167 [C] 3.95 1:1022 [G] 0.0
P:174 [THR] 1:84 [G] 4.89 0.0
P:174 [THR] 1:85 [U] 2.93 1:98 [A] 0.0
P:174 [THR] 1:698 [A] 4.91 1:847 [OMU] 0.0
P:174 [THR] 1:699 [C] 4.18 1:846 [G] 0.0
P:175 [ASN] 1:85 [U] 3.6 1:98 [A] 0.0
P:175 [ASN] 1:86 [G] 3.15 0.0
P:175 [ASN] 1:87 [A] 4.89 1:97 [G] 0.0
P:176 [ARG] 1:86 [G] 3.48 base/AA stacks 0.0
P:176 [ARG] 1:745 [U] 3.53 1:750 [G] 0.0
P:176 [ARG] 1:746 [G] 4.81 1:749 [A] 0.0
P:176 [ARG] 1:830 [G] 4.78 1:814 [C] 0.0
P:176 [ARG] 1:831 [C] 3.36 base/AA stacks 0.0
P:177 [GLY] 1:86 [G] 3.02 sugar:BB 0.0
P:178 [LYS] 1:90 [G] 3.81 1:94 [A] base:SC 0.0
P:178 [LYS] 1:95 [G] 4.94 1:89 [C] 0.0
P:179 [GLU] 1:831 [C] 2.81 base:BB 0.0
P:180 [THR] 1:86 [G] 4.36 0.0
P:180 [THR] 1:831 [C] 3.72 0.0
P:184 [ARG] 1:830 [G] 4.99 1:814 [C] 0.0
P:184 [ARG] 1:831 [C] 3.32 base/AA stacks 0.0
P:185 [ARG] 1:747 [A] 2.92 0.0
P:191 [LYS] 1:829 [U] 3.16 1:815 [G] 0.0
P:191 [LYS] 1:830 [G] 3.28 1:814 [C] 0.0
P:192 [ARG] 1:830 [G] 2.7 1:814 [C] 0.0
P:192 [ARG] 1:831 [C] 2.64 0.0
P:194 [ALA] 1:829 [U] 3.46 1:815 [G] 0.0
P:194 [ALA] 1:830 [G] 3.17 1:814 [C] 0.0
P:195 [PHE] 1:829 [U] 4.73 1:815 [G] 0.0

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group71 6AZ3_P_1 P: 60s ribosomal protein l18, putative, Leishmania donovani (natural) 1: rRNA alpha, Leishmania donovani (natural) A0A3S7XBN1 Ribosomal proteins L15p and L18e Eukaryotic large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_P_1 7O7Y_BQ_B5 0.63 0.92 1.51 0.42 Ribosomal proteins L15p and L18e Eukaryotic large subunit ribosomal RNA compare
1VQ8_O_0 6AZ3_P_1 0.73 0.74 2.08 0.24 Ribosomal proteins L15p and L18e compare
1YHQ_O_0 6AZ3_P_1 0.76 0.74 1.97 0.24 Ribosomal proteins L15p and L18e compare