Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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Focus on
InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
1VQ8_Q
|
1VQ8_0
|
7O7Y_BT
|
7O7Y_B5
|
Conserved?
|
---|---|---|---|---|
Q:82 [LYS] | 0:2388 [C] | BT:87 [LYS] | B5:4046 [U] | ✔ |
Q:82 [LYS] | 0:2389 [U] | BT:87 [LYS] | B5:4047 [U] | ✔ |
Q:9 [GLY] | 0:2297 [U] | BT:10 [GLY] | B5:3955 [G] | ✔ |
Q:9 [GLY] | 0:2298 [C] | BT:10 [GLY] | B5:3956 [U] | ✔ |
Q:10 [THR] | 0:2297 [U] | BT:11 [THR] | B5:3955 [G] | ✔ |
Q:8 [GLU] | 0:2296 [C] | BT:9 [ARG] | B5:3954 [U] | ✔ |
Q:8 [GLU] | 0:2297 [U] | BT:9 [ARG] | B5:3955 [G] | ✔ |
Q:8 [GLU] | 0:2305 [A] | BT:9 [ARG] | B5:3963 [G] | ✔ |
Q:8 [GLU] | 0:2306 [U] | BT:9 [ARG] | B5:3964 [U] | ✔ |
Q:94 [GLN] | 0:949 [U] | BT:99 [SER] | B5:1669 [U] | ✔ |
Q:94 [GLN] | 0:1018 [A] | BT:99 [SER] | B5:1738 [G] | ✔ |
Q:94 [GLN] | 0:1019 [C] | BT:99 [SER] | B5:1739 [U] | ✔ |
Q:14 [LEU] | 0:2364 [A] | BT:15 [PHE] | B5:4022 [G] | ✔ |
Q:14 [LEU] | 0:2365 [G] | BT:15 [PHE] | B5:4023 [G] | ✔ |
Q:83 [THR] | 0:2387 [U] | BT:88 [ARG] | B5:4045 [PSU] | ✔ |
Q:83 [THR] | 0:2388 [C] | BT:88 [ARG] | B5:4046 [U] | ✔ |
Q:69 [ASP] | 0:2404 [G] | BT:69 [GLN] | B5:4060 [C] | ✔ |
Q:41 [LEU] | 0:951 [A] | BT:42 [ILE] | B5:1671 [C] | ✔ |
Q:95 [GLU] | 0:948 [G] | BT:101 [SER] | B5:1668 [A] | ✔ |
Q:95 [GLU] | 0:949 [U] | BT:101 [SER] | B5:1669 [U] | ✔ |
Q:60 [THR] | 0:1018 [A] | BT:61 [THR] | B5:1738 [G] | ✔ |
Q:60 [THR] | 0:1019 [C] | BT:61 [THR] | B5:1739 [U] | ✔ |
Q:55 [ARG] | 0:2304 [G] | BT:56 [CYS] | B5:3962 [G] | ✔ |
Q:55 [ARG] | 0:2389 [U] | BT:56 [CYS] | B5:4047 [U] | ✔ |
Q:85 [ILE] | 0:2386 [U] | BT:90 [ASN] | B5:4044 [A] | ✔ |
Q:85 [ILE] | 0:2387 [U] | BT:90 [ASN] | B5:4045 [PSU] | ✔ |
Q:85 [ILE] | 0:2402 [A] | BT:90 [ASN] | B5:4058 [PSU] | ✔ |
Q:85 [ILE] | 0:2403 [C] | BT:90 [ASN] | B5:4059 [A] | ✔ |
Q:45 [PRO] | 0:2365 [G] | BT:46 [GLY] | B5:4023 [G] | ✔ |
Q:2 [SER] | 0:2298 [C] | BT:3 [ASN] | B5:3956 [U] | ✔ |
Q:2 [SER] | 0:2299 [G] | BT:3 [ASN] | B5:3957 [C] | ✔ |
Q:1 [PRO] | 0:2307 [A] | BT:2 [THR] | B5:3965 [A] | ✔ |
Q:48 [PRO] | 0:2365 [G] | BT:49 [GLN] | B5:4023 [G] | ✔ |
Q:48 [PRO] | 0:2370 [A] | BT:49 [GLN] | B5:4028 [A] | ✔ |
Q:48 [PRO] | 0:2422 [U] | BT:49 [GLN] | B5:4078 [C] | ✔ |
Q:77 [ASP] | 0:2389 [U] | BT:78 [LYS] | B5:4047 [U] | ✔ |
Q:40 [HIS] | 0:949 [U] | BT:41 [ASP] | B5:1669 [U] | ✔ |
Q:40 [HIS] | 0:950 [G] | BT:41 [ASP] | B5:1670 [C] | ✔ |
Q:40 [HIS] | 0:1018 [A] | BT:41 [ASP] | B5:1738 [G] | ✔ |
Q:3 [SER] | 0:2295 [G] | BT:4 [THR] | B5:3953 [C] | ✔ |
Q:3 [SER] | 0:2296 [C] | BT:4 [THR] | B5:3954 [U] | ✔ |
Q:15 [LYS] | 0:2364 [A] | BT:16 [SER] | B5:4022 [G] | ✔ |
Q:15 [LYS] | 0:2365 [G] | BT:16 [SER] | B5:4023 [G] | ✔ |
Q:84 [ILE] | 0:2387 [U] | BT:89 [ILE] | B5:4045 [PSU] | ✔ |
Q:68 [GLY] | 0:2403 [C] | BT:68 [THR] | B5:4059 [A] | ✔ |
Q:68 [GLY] | 0:2404 [G] | BT:68 [THR] | B5:4060 [C] | ✔ |
Q:23 [THR] | 0:2367 [A] | BT:24 [VAL] | B5:4025 [A] | ✔ |
Q:6 [PRO] | 0:2296 [C] | BT:7 [LYS] | B5:3954 [U] | ✔ |
Q:6 [PRO] | 0:2389 [U] | BT:7 [LYS] | B5:4047 [U] | ✔ |
Q:6 [PRO] | 0:2424 [U] | BT:7 [LYS] | B5:4080 [U] | ✔ |
Q:6 [PRO] | 0:2425 [A] | BT:7 [LYS] | B5:4081 [C] | ✔ |
Q:11 [ARG] | 0:1007 [A] | BT:12 [ARG] | B5:1727 [A] | ✔ |
Q:11 [ARG] | 0:1008 [C] | BT:12 [ARG] | B5:1728 [C] | ✔ |
Q:11 [ARG] | 0:1009 [U] | BT:12 [ARG] | B5:1729 [U] | ✔ |
Q:11 [ARG] | 0:2297 [U] | BT:12 [ARG] | B5:3955 [G] | ✔ |
Q:11 [ARG] | 0:2298 [C] | BT:12 [ARG] | B5:3956 [U] | ✔ |
Q:11 [ARG] | 0:2363 [G] | BT:12 [ARG] | B5:4021 [G] | ✔ |
Q:11 [ARG] | 0:2364 [A] | BT:12 [ARG] | B5:4022 [G] | ✔ |
Q:4 [ASN] | 0:2295 [G] | BT:5 [LYS] | B5:3953 [C] | ✔ |
Q:4 [ASN] | 0:2296 [C] | BT:5 [LYS] | B5:3954 [U] | ✔ |
Q:4 [ASN] | 0:2306 [U] | BT:5 [LYS] | B5:3964 [U] | ✔ |
Q:4 [ASN] | 0:2390 [U] | BT:5 [LYS] | B5:4048 [U] | ✔ |
Q:4 [ASN] | 0:2391 [C] | BT:5 [LYS] | B5:4049 [C] | ✔ |
Q:70 [ALA] | 0:2403 [C] | BT:71 [ALA] | B5:4059 [A] | ✔ |
Q:70 [ALA] | 0:2404 [G] | BT:71 [ALA] | B5:4060 [C] | ✔ |
Q:80 [LYS] | 0:2395 [A] | BT:85 [LEU] | B5:4051 [G] | ✔ |
Q:76 [VAL] | 0:1018 [A] | BT:77 [ASN] | B5:1738 [G] | ✔ |
Q:76 [VAL] | 0:1019 [C] | BT:77 [ASN] | B5:1739 [U] | ✔ |
Q:50 [GLY] | 0:2402 [A] | BT:51 [GLY] | B5:4058 [PSU] | ✔ |
Q:50 [GLY] | 0:2403 [C] | BT:51 [GLY] | B5:4059 [A] | ✔ |
Q:46 [SER] | 0:2365 [G] | BT:47 [THR] | B5:4023 [G] | ✔ |
Q:46 [SER] | 0:2366 [C] | BT:47 [THR] | B5:4024 [C] | ✔ |
Q:46 [SER] | 0:2370 [A] | BT:47 [THR] | B5:4028 [A] | ✔ |
Q:42 [LYS] | 0:951 [A] | BT:43 [LYS] | B5:1671 [C] | ✔ |
Q:42 [LYS] | 0:952 [G] | BT:43 [LYS] | B5:1672 [G] | ✔ |
Q:49 [ASN] | 0:2402 [A] | BT:50 [LYS] | B5:4058 [PSU] | ✔ |
Q:49 [ASN] | 0:2403 [C] | BT:50 [LYS] | B5:4059 [A] | ✔ |
Q:49 [ASN] | 0:2418 [G] | BT:50 [LYS] | B5:4074 [G] | ✔ |
Q:87 [THR] | 0:2403 [C] | BT:92 [ARG] | B5:4059 [A] | ✔ |
Q:38 [LYS] | 0:1019 [C] | BT:39 [ILE] | B5:1739 [U] | ✔ |
Q:58 [GLY] | 0:950 [G] | BT:59 [GLY] | B5:1670 [C] | ✔ |
Q:58 [GLY] | 0:951 [A] | BT:59 [GLY] | B5:1671 [C] | ✔ |
Q:58 [GLY] | 0:1018 [A] | BT:59 [GLY] | B5:1738 [G] | ✔ |
Q:53 [HIS] | 0:2388 [C] | BT:54 [HIS] | B5:4046 [U] | ✔ |
Q:53 [HIS] | 0:2389 [U] | BT:54 [HIS] | B5:4047 [U] | ✔ |
Q:16 [ASN] | 0:2364 [A] | BT:17 [ARG] | B5:4022 [G] | ✔ |
Q:16 [ASN] | 0:2365 [G] | BT:17 [ARG] | B5:4023 [G] | ✔ |
Q:16 [ASN] | 0:2366 [C] | BT:17 [ARG] | B5:4024 [C] | ✔ |
Q:18 [PRO] | 0:1010 [C] | BT:19 [PHE] | B5:1730 [U] | ✔ |
Q:56 [PHE] | 0:2388 [C] | BT:57 [TYR] | B5:4046 [U] | ✔ |
Q:56 [PHE] | 0:2389 [U] | BT:57 [TYR] | B5:4047 [U] | ✔ |
Q:13 [LYS] | 0:952 [G] | BT:14 [MET] | B5:1672 [G] | ✔ |
Q:13 [LYS] | 0:953 [G] | BT:14 [MET] | B5:1673 [G] | ✔ |
Q:13 [LYS] | 0:2303 [A] | BT:14 [MET] | B5:3961 [C] | ✔ |
Q:13 [LYS] | 0:2304 [G] | BT:14 [MET] | B5:3962 [G] | ✔ |
Q:21 [ARG] | 0:2366 [C] | BT:22 [HIS] | B5:4024 [C] | ✔ |
Q:59 [GLN] | 0:1018 [A] | BT:60 [LYS] | B5:1738 [G] | ✔ |
Q:5 [GLY] | 0:2295 [G] | BT:6 [GLY] | B5:3953 [C] | ✔ |
Q:5 [GLY] | 0:2296 [C] | BT:6 [GLY] | B5:3954 [U] | ✔ |
Q:5 [GLY] | 0:2424 [U] | BT:6 [GLY] | B5:4080 [U] | ✔ |
Q:7 [LEU] | 0:2296 [C] | BT:8 [ARG] | B5:3954 [U] | ✔ |
Q:7 [LEU] | 0:2297 [U] | BT:8 [ARG] | B5:3955 [G] | ✔ |
Q:7 [LEU] | 0:2363 [G] | BT:8 [ARG] | B5:4021 [G] | ✔ |
Q:7 [LEU] | 0:2423 [C] | BT:8 [ARG] | B5:4079 [C] | ✔ |
Q:7 [LEU] | 0:2424 [U] | BT:8 [ARG] | B5:4080 [U] | ✔ |
Q:12 [GLY] | 0:953 [G] | BT:13 [TYR] | B5:1673 [G] | ✔ |
Q:57 [ASP] | 0:951 [A] | BT:58 [HIS] | B5:1671 [C] | ✔ |
Q:57 [ASP] | 0:952 [G] | BT:58 [HIS] | B5:1672 [G] | ✔ |
Q:57 [ASP] | 0:2303 [A] | BT:58 [HIS] | B5:3961 [C] | ✔ |
Q:92 [ARG] | 0:950 [G] | BT:97 [LYS] | B5:1670 [C] | ✔ |
Q:22 [GLY] | 0:2366 [C] | BT:23 [GLY] | B5:4024 [C] | ✔ |
Q:22 [GLY] | 0:2367 [A] | BT:23 [GLY] | B5:4025 [A] | ✔ |
Q:82 [LYS] | 0:2387 [U] | BT:87 [LYS] | B5:4045 [PSU] | ❌ 7O7Y_BT_B5 |
Q:9 [GLY] | 0:2296 [C] | BT:10 [GLY] | B5:3954 [U] | ❌ 7O7Y_BT_B5 |
Q:94 [GLN] | 0:948 [G] | BT:99 [SER] | B5:1668 [A] | ❌ 7O7Y_BT_B5 |
Q:94 [GLN] | 0:1020 [A] | BT:99 [SER] | B5:1740 [A] | ❌ 7O7Y_BT_B5 |
Q:69 [ASP] | 0:2403 [C] | BT:69 [GLN] | B5:4059 [A] | ❌ 7O7Y_BT_B5 |
Q:51 [ARG] | 0:2402 [A] | BT:52 [MET] | B5:4058 [PSU] | ❌ 7O7Y_BT_B5 |
Q:60 [THR] | 0:950 [G] | BT:61 [THR] | B5:1670 [C] | ❌ 7O7Y_BT_B5 |
Q:55 [ARG] | 0:2305 [A] | BT:56 [CYS] | B5:3963 [G] | ❌ 7O7Y_BT_B5 |
Q:55 [ARG] | 0:2390 [U] | BT:56 [CYS] | B5:4048 [U] | ❌ 7O7Y_BT_B5 |
Q:2 [SER] | 0:2295 [G] | BT:3 [ASN] | B5:3953 [C] | ❌ 7O7Y_BT_B5 |
Q:2 [SER] | 0:2296 [C] | BT:3 [ASN] | B5:3954 [U] | ❌ 7O7Y_BT_B5 |
Q:2 [SER] | 0:2297 [U] | BT:3 [ASN] | B5:3955 [G] | ❌ 7O7Y_BT_B5 |
Q:1 [PRO] | 0:2298 [C] | BT:2 [THR] | B5:3956 [U] | ❌ 7O7Y_BT_B5 |
Q:1 [PRO] | 0:2299 [G] | BT:2 [THR] | B5:3957 [C] | ❌ 7O7Y_BT_B5 |
Q:1 [PRO] | 0:2300 [A] | BT:2 [THR] | B5:3958 [A] | ❌ 7O7Y_BT_B5 |
Q:1 [PRO] | 0:2306 [U] | BT:2 [THR] | B5:3964 [U] | ❌ 7O7Y_BT_B5 |
Q:3 [SER] | 0:2297 [U] | BT:4 [THR] | B5:3955 [G] | ❌ 7O7Y_BT_B5 |
Q:15 [LYS] | 0:1009 [U] | BT:16 [SER] | B5:1729 [U] | ❌ 7O7Y_BT_B5 |
Q:68 [GLY] | 0:2405 [C] | BT:68 [THR] | B5:4061 [A] | ❌ 7O7Y_BT_B5 |
Q:23 [THR] | 0:2366 [C] | BT:24 [VAL] | B5:4024 [C] | ❌ 7O7Y_BT_B5 |
Q:80 [LYS] | 0:2394 [A] | BT:85 [LEU] | B5:4050 [A] | ❌ 7O7Y_BT_B5 |
Q:78 [GLY] | 0:2394 [A] | BT:79 [GLN] | B5:4050 [A] | ❌ 7O7Y_BT_B5 |
Q:38 [LYS] | 0:1020 [A] | BT:39 [ILE] | B5:1740 [A] | ❌ 7O7Y_BT_B5 |
Q:59 [GLN] | 0:950 [G] | BT:60 [LYS] | B5:1670 [C] | ❌ 7O7Y_BT_B5 |
Q:9 [GLY] | 0:953 [G] | BT:10 [GLY] | B5:1673 [G] | ❌ 1VQ8_Q_0 |
Q:9 [GLY] | 0:2304 [G] | BT:10 [GLY] | B5:3962 [G] | ❌ 1VQ8_Q_0 |
Q:95 [GLU] | 0:1018 [A] | BT:101 [SER] | B5:1738 [G] | ❌ 1VQ8_Q_0 |
Q:95 [GLU] | 0:1019 [C] | BT:101 [SER] | B5:1739 [U] | ❌ 1VQ8_Q_0 |
Q:95 [GLU] | 0:1020 [A] | BT:101 [SER] | B5:1740 [A] | ❌ 1VQ8_Q_0 |
Q:12 [GLY] | 0:1009 [U] | BT:13 [TYR] | B5:1729 [U] | ❌ 1VQ8_Q_0 |
Q:12 [GLY] | 0:1008 [C] | BT:13 [TYR] | B5:1728 [C] | ❌ 1VQ8_Q_0 |
Q:12 [GLY] | 0:2298 [C] | BT:13 [TYR] | B5:3956 [U] | ❌ 1VQ8_Q_0 |
Q:21 [ARG] | 0:2365 [G] | BT:22 [HIS] | B5:4023 [G] | ❌ 1VQ8_Q_0 |
Q:2 [SER] | 0:2306 [U] | BT:3 [ASN] | B5:3964 [U] | ❌ 1VQ8_Q_0 |
Q:2 [SER] | 0:2307 [A] | BT:3 [ASN] | B5:3965 [A] | ❌ 1VQ8_Q_0 |
Q:2 [SER] | 0:2300 [A] | BT:3 [ASN] | B5:3958 [A] | ❌ 1VQ8_Q_0 |
Q:45 [PRO] | 0:2364 [A] | BT:46 [GLY] | B5:4022 [G] | ❌ 1VQ8_Q_0 |
Q:48 [PRO] | 0:2423 [C] | BT:49 [GLN] | B5:4079 [C] | ❌ 1VQ8_Q_0 |
Q:48 [PRO] | 0:2364 [A] | BT:49 [GLN] | B5:4022 [G] | ❌ 1VQ8_Q_0 |
Q:4 [ASN] | 0:2389 [U] | BT:5 [LYS] | B5:4047 [U] | ❌ 1VQ8_Q_0 |
Q:51 [ARG] | 0:2423 [C] | BT:52 [MET] | B5:4079 [C] | ❌ 1VQ8_Q_0 |
Q:53 [HIS] | 0:2390 [U] | BT:54 [HIS] | B5:4048 [U] | ❌ 1VQ8_Q_0 |
Q:5 [GLY] | 0:2425 [A] | BT:6 [GLY] | B5:4081 [C] | ❌ 1VQ8_Q_0 |
Q:59 [GLN] | 0:2303 [A] | BT:60 [LYS] | B5:3961 [C] | ❌ 1VQ8_Q_0 |
Q:69 [ASP] | 0:2405 [C] | BT:69 [GLN] | B5:4061 [A] | ❌ 1VQ8_Q_0 |
Q:6 [PRO] | 0:2388 [C] | BT:7 [LYS] | B5:4046 [U] | ❌ 1VQ8_Q_0 |
Q:6 [PRO] | 0:2295 [G] | BT:7 [LYS] | B5:3953 [C] | ❌ 1VQ8_Q_0 |
Q:77 [ASP] | 0:2390 [U] | BT:78 [LYS] | B5:4048 [U] | ❌ 1VQ8_Q_0 |
Q:77 [ASP] | 0:2391 [C] | BT:78 [LYS] | B5:4049 [C] | ❌ 1VQ8_Q_0 |
Q:77 [ASP] | 0:2395 [A] | BT:78 [LYS] | B5:4051 [G] | ❌ 1VQ8_Q_0 |
Q:78 [GLY] | 0:1018 [A] | BT:79 [GLN] | B5:1738 [G] | ❌ 1VQ8_Q_0 |
Q:7 [LEU] | 0:2364 [A] | BT:8 [ARG] | B5:4022 [G] | ❌ 1VQ8_Q_0 |
Q:82 [LYS] | 0:2391 [C] | BT:87 [LYS] | B5:4049 [C] | ❌ 1VQ8_Q_0 |
Q:82 [LYS] | 0:2395 [A] | BT:87 [LYS] | B5:4051 [G] | ❌ 1VQ8_Q_0 |
Q:84 [ILE] | 0:2388 [C] | BT:89 [ILE] | B5:4046 [U] | ❌ 1VQ8_Q_0 |
Q:8 [GLU] | 0:2424 [U] | BT:9 [ARG] | B5:4080 [U] | ❌ 1VQ8_Q_0 |
Q:8 [GLU] | 0:2299 [G] | BT:9 [ARG] | B5:3957 [C] | ❌ 1VQ8_Q_0 |
Q:8 [GLU] | 0:2300 [A] | BT:9 [ARG] | B5:3958 [A] | ❌ 1VQ8_Q_0 |
Q:87 [THR] | 0:2402 [A] | BT:92 [ARG] | B5:4058 [PSU] | ❌ 1VQ8_Q_0 |
Q:87 [THR] | 0:2418 [G] | BT:92 [ARG] | B5:4074 [G] | ❌ 1VQ8_Q_0 |
Q:87 [THR] | 0:2404 [G] | BT:92 [ARG] | B5:4060 [C] | ❌ 1VQ8_Q_0 |
Q:92 [ARG] | 0:951 [A] | BT:97 [LYS] | B5:1671 [C] | ❌ 1VQ8_Q_0 |
Q:2 [SER] | 0:2310 [G] | BT:3 [ASN] | B5:3968 [G] | ❌ 7O7Y_B5:3968 no longer at interface |
Q:2 [SER] | 0:2311 [A] | BT:3 [ASN] | B5:3969 [C] | ❌ 7O7Y_B5:3969 no longer at interface |
Q:21 [ARG] | 0:2353 [A] | BT:22 [HIS] | B5:4011 [U] | ❌ 7O7Y_B5:4011 no longer at interface |
Q:21 [ARG] | 0:2354 [A] | BT:22 [HIS] | B5:4012 [G] | ❌ 7O7Y_B5:4012 no longer at interface |
Q:67 [GLN] | 0:2385 [G] | BT:67 [VAL] | B5:4043 [G] | ❌ 7O7Y_BT:67, 7O7Y_B5:4043 no longer at interface |
Q:12 [GLY] | 0:954 [U] | BT:13 [TYR] | B5:1674 [U] | ❌ 1VQ8_0:954 no longer at interface |
Q:18 [PRO] | 0:1011 [C] | BT:19 [PHE] | B5:1731 [PSU] | ❌ 1VQ8_0:1011 no longer at interface |
Q:1 [PRO] | 0:2308 [U] | BT:2 [THR] | B5:3966 [6MZ] | ❌ 1VQ8_0:2308 no longer at interface |
Q:23 [THR] | 0:2368 [A] | BT:24 [VAL] | B5:4026 [A] | ❌ 1VQ8_0:2368 no longer at interface |
Q:49 [ASN] | 0:2419 [U] | BT:50 [LYS] | B5:4075 [G] | ❌ 1VQ8_0:2419 no longer at interface |
Q:58 [GLY] | 0:1017 [U] | BT:59 [GLY] | B5:1737 [G] | ❌ 1VQ8_0:1017 no longer at interface |
Q:59 [GLN] | 0:1017 [U] | BT:60 [LYS] | B5:1737 [G] | ❌ 1VQ8_0:1017 no longer at interface |
Q:6 [PRO] | 0:2399 [G] | BT:7 [LYS] | B5:4055 [G] | ❌ 1VQ8_0:2399 no longer at interface |
Q:6 [PRO] | 0:2401 [A] | BT:7 [LYS] | B5:4057 [A] | ❌ 1VQ8_0:2401 no longer at interface |
Q:6 [PRO] | 0:2400 [G] | BT:7 [LYS] | B5:4056 [A] | ❌ 1VQ8_0:2400 no longer at interface |
Q:81 [GLU] | 0:2388 [C] | BT:86 [ALA] | B5:4046 [U] | ❌ 7O7Y_BT:86 no longer at interface |
Q:17 [LYS] | 0:953 [G] | BT:18 [PRO] | B5:1673 [G] | ❌ 7O7Y_BT:18 no longer at interface |
Q:72 [LYS] | 0:2386 [U] | BT:73 [GLY] | B5:4044 [A] | ❌ 7O7Y_BT:73 no longer at interface |
Q:93 [ARG] | 0:949 [U] | BT:98 [HIS] | B5:1669 [U] | ❌ 7O7Y_BT:98 no longer at interface |
Q:47 [VAL] | 0:2370 [A] | BT:48 [VAL] | B5:4028 [A] | ❌ 7O7Y_BT:48 no longer at interface |
Q:79 [GLY] | 0:2394 [A] | BT:84 [ILE] | B5:4050 [A] | ❌ 7O7Y_BT:84 no longer at interface |
Q:20 [ASP] | 0:2366 [C] | BT:21 [LYS] | B5:4024 [C] | ❌ 7O7Y_BT:21 no longer at interface |
Q:67 [GLN] | 0:2386 [U] | BT:67 [VAL] | B5:4044 [A] | ❌ 7O7Y_BT:67 no longer at interface |
Q:67 [GLN] | 0:2402 [A] | BT:67 [VAL] | B5:4058 [PSU] | ❌ 7O7Y_BT:67 no longer at interface |
Q:67 [GLN] | 0:2403 [C] | BT:67 [VAL] | B5:4059 [A] | ❌ 7O7Y_BT:67 no longer at interface |
Q:67 [GLN] | 0:2404 [G] | BT:67 [VAL] | B5:4060 [C] | ❌ 7O7Y_BT:67 no longer at interface |
Q:54 [PRO] | 0:2303 [A] | BT:55 [LYS] | B5:3961 [C] | ❌ 1VQ8_Q:54 no longer at interface |
Q:54 [PRO] | 0:2304 [G] | BT:55 [LYS] | B5:3962 [G] | ❌ 1VQ8_Q:54 no longer at interface |
Q:54 [PRO] | 0:2305 [A] | BT:55 [LYS] | B5:3963 [G] | ❌ 1VQ8_Q:54 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
SH3 | 0.94 | 1.91 | 0.22 | 0.89 | 0.94 | 0.87 | 0.87 | 0.67 | 0.57 | 0.19 | 0.32 |
Other pairs involving 1VQ8_Q_0 or 7O7Y_BT_B5
Total number of entries: 6
Interface 1 | Interface 2 |
Percentage conservation |
Interface TM-score |
Interface RMSD |
Percentage identity |
Common ECOD label(s) |
Common RFAM label(s) |
Explore both interfaces |
---|---|---|---|---|---|---|---|---|
1VQ8_Q_0 | 7O7Y_BT_B5 | 0.67 | 0.94 | 1.91 | 0.22 | SH3 | compare | |
1VQ8_Q_0 | 1YHQ_Q_0 | 0.99 | 1.0 | 0.21 | 1.0 | SH3 | Archaeal large subunit ribosomal RNA | compare |
1VQ8_Q_0 | 6AZ3_S_2 | 0.70 | 0.78 | 1.53 | 0.23 | SH3 | compare | |
6AZ3_S_1 | 7O7Y_BT_B5 | 0.69 | 0.92 | 1.39 | 0.26 | SH3 | Eukaryotic large subunit ribosomal RNA | compare |
6AZ3_S_2 | 7O7Y_BT_B5 | 0.79 | 0.91 | 1.52 | 0.42 | SH3 | Eukaryotic large subunit ribosomal RNA | compare |
1YHQ_Q_0 | 7O7Y_BT_B5 | 0.67 | 0.94 | 1.87 | 0.23 | SH3 | compare |