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All interfaces > All interologs > Interface groups > group73 > 6AZ3_X_4 vs 7O7Y_BW_B5

Interface analysis


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Common contacts -

6AZ3_X
6AZ3_4
7O7Y_BW
7O7Y_B5
Conserved?
X:38 [PRO] 4:80 [A] BW:34 [ALA] B5:4376 [G] ✔
X:38 [PRO] 4:112 [C] BW:34 [ALA] B5:4408 [C] ✔
X:38 [PRO] 4:113 [G] BW:34 [ALA] B5:4409 [G] ✔
X:18 [GLY] 4:78 [C] BW:18 [GLY] B5:4374 [PSU] ✔
X:18 [GLY] 4:79 [U] BW:18 [GLY] B5:4375 [U] ✔
X:42 [ALA] 4:112 [C] BW:38 [SER] B5:4408 [C] ✔
X:36 [SER] 4:79 [U] BW:32 [LEU] B5:4375 [U] ✔
X:17 [HIS] 4:78 [C] BW:17 [HIS] B5:4374 [PSU] ✔
X:17 [HIS] 4:79 [U] BW:17 [HIS] B5:4375 [U] ✔
X:16 [GLY] 4:78 [C] BW:16 [GLY] B5:4374 [PSU] ✔
X:39 [LYS] 4:112 [C] BW:35 [LYS] B5:4408 [C] ✔
X:39 [LYS] 4:113 [G] BW:35 [LYS] B5:4409 [G] ✔
X:19 [ARG] 4:79 [U] BW:19 [ARG] B5:4375 [U] ✔
X:19 [ARG] 4:80 [A] BW:19 [ARG] B5:4376 [G] ✔
X:46 [ARG] 4:111 [C] BW:42 [SER] B5:4407 [G] ❌ 7O7Y_BW_B5
X:46 [ARG] 4:112 [C] BW:42 [SER] B5:4408 [C] ❌ 7O7Y_BW_B5
X:16 [GLY] 4:79 [U] BW:16 [GLY] B5:4375 [U] ❌ 6AZ3_X_4
X:42 [ALA] 4:111 [C] BW:38 [SER] B5:4407 [G] ❌ 6AZ3_X_4
X:41 [PHE] 4:80 [A] BW:37 [GLU] B5:4376 [G] ❌ 6AZ3_X:41 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
LIM domain-like Eukaryotic large subunit ribosomal RNA 0.87 1.03 0.50 0.85 0.84 1.0 1.0 0.87 0.96 0.00 0.20


Other pairs involving 6AZ3_X_4 or 7O7Y_BW_B5

Total number of entries: 4

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_U_0 7O7Y_BW_B5 0.72 0.94 1.63 0.47 LIM domain-like compare
1YHQ_U_0 7O7Y_BW_B5 0.71 0.94 1.48 0.47 LIM domain-like compare
6AZ3_X_4 7O7Y_BW_B5 0.87 0.87 1.03 0.5 LIM domain-like Eukaryotic large subunit ribosomal RNA compare
6AZ3_X_5 7O7Y_BW_B5 0.88 0.9 0.93 0.5 LIM domain-like compare