RNAprotDB

Interface analysis

Contacts -

6AZ3_X	6AZ3_5	Distance	Base Pair	Hbond nuc:res	Base Stacking	Residue conservation
X:37 [ARG]	5:38 [G]	3.24	5:100 [C]			66.32
X:39 [LYS]	5:39 [C]	3.23	5:99 [A]			94.99
X:39 [LYS]	5:40 [A]	3.72	5:98 [A]	base:SC		94.99
X:54 [PRO]	5:40 [A]	3.62	5:98 [A]			36.15
X:54 [PRO]	5:41 [U]	3.43				36.15
X:54 [PRO]	5:97 [G]	4.03				36.15
X:55 [TRP]	5:40 [A]	3.4	5:98 [A]		base/AA stacks	87.71
X:55 [TRP]	5:41 [U]	4.22				87.71
X:55 [TRP]	5:97 [G]	4.11				87.71
X:59 [TYR]	5:94 [G]	4.73	5:45 [C]			59.68
X:60 [ARG]	5:97 [G]	3.26			base/AA stacks	98.97
X:64 [ARG]	5:94 [G]	2.85	5:45 [C]			79.81
X:64 [ARG]	5:95 [C]	3.52	5:44 [G]			79.81
X:64 [ARG]	5:96 [U]	4.23	5:43 [A]			79.81
X:64 [ARG]	5:97 [G]	2.84				79.81

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)