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All interfaces > All interologs > Interface groups > group73 > 6AZ3_X_5 vs 7O7Y_BW_B5

Interface analysis


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Licorice
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Common contacts -

6AZ3_X
6AZ3_5
7O7Y_BW
7O7Y_B5
Conserved?
X:55 [TRP] 5:40 [A] BW:51 [TRP] B5:4744 [G] ✔
X:55 [TRP] 5:41 [U] BW:51 [TRP] B5:4745 [U] ✔
X:55 [TRP] 5:97 [G] BW:51 [TRP] B5:4780 [G] ✔
X:60 [ARG] 5:97 [G] BW:56 [ARG] B5:4780 [G] ✔
X:39 [LYS] 5:39 [C] BW:35 [LYS] B5:4743 [C] ✔
X:39 [LYS] 5:40 [A] BW:35 [LYS] B5:4744 [G] ✔
X:54 [PRO] 5:40 [A] BW:50 [ASN] B5:4744 [G] ✔
X:54 [PRO] 5:41 [U] BW:50 [ASN] B5:4745 [U] ✔
X:64 [ARG] 5:94 [G] BW:61 [LYS] B5:4777 [A] ✔
X:64 [ARG] 5:95 [C] BW:61 [LYS] B5:4778 [U] ✔
X:64 [ARG] 5:96 [U] BW:61 [LYS] B5:4779 [U] ✔
X:64 [ARG] 5:97 [G] BW:61 [LYS] B5:4780 [G] ✔
X:59 [TYR] 5:94 [G] BW:55 [TYR] B5:4777 [A] ✔
X:54 [PRO] 5:97 [G] BW:50 [ASN] B5:4780 [G] ❌ 7O7Y_BW_B5
X:37 [ARG] 5:38 [G] BW:33 [ASN] B5:4742 [U] ❌ 7O7Y_BW:33, 7O7Y_B5:4742 no longer at interface
X:59 [TYR] 5:93 [C] BW:55 [TYR] B5:4776 [U] ❌ 6AZ3_5:93 no longer at interface
X:63 [HIS] 5:93 [C] BW:59 [HIS] B5:4776 [U] ❌ 6AZ3_X:63, 6AZ3_5:93 no longer at interface
X:11 [PHE] 5:97 [G] BW:11 [TYR] B5:4780 [G] ❌ 6AZ3_X:11 no longer at interface
X:63 [HIS] 5:94 [G] BW:59 [HIS] B5:4777 [A] ❌ 6AZ3_X:63 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
LIM domain-like 0.9 0.93 0.50 0.85 0.85 0.86 0.88 0.88 0.88 0.40 0.83


Other pairs involving 6AZ3_X_5 or 7O7Y_BW_B5

Total number of entries: 5

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_U_0 6AZ3_X_5 0.88 0.75 1.17 0.25 LIM domain-like compare
1VQ8_U_0 7O7Y_BW_B5 0.72 0.94 1.63 0.47 LIM domain-like compare
1YHQ_U_0 7O7Y_BW_B5 0.71 0.94 1.48 0.47 LIM domain-like compare
6AZ3_X_4 7O7Y_BW_B5 0.87 0.87 1.03 0.5 LIM domain-like Eukaryotic large subunit ribosomal RNA compare
6AZ3_X_5 7O7Y_BW_B5 0.88 0.9 0.93 0.5 LIM domain-like compare