Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
| 2BH2_A
|
2BH2_C
|
3WBM_A
|
3WBM_X
|
Conserved?
|
|---|---|---|---|---|
| A:365 [ALA] | C:1938 [A] | A:15 [GLY] | X:12 [C] | ✔ |
| A:422 [HIS] | C:1940 [U] | A:87 [VAL] | X:14 [G] | ✔ |
| A:366 [ARG] | C:1938 [A] | A:16 [LYS] | X:12 [C] | ✔ |
| A:366 [ARG] | C:1940 [U] | A:16 [LYS] | X:14 [G] | ✔ |
| A:365 [ALA] | C:1937 [A] | A:15 [GLY] | X:11 [C] | ❌ 3WBM_A_X |
| A:422 [HIS] | C:1941 [C] | A:87 [VAL] | X:15 [A] | ❌ 3WBM_A_X |
| A:366 [ARG] | C:1941 [C] | A:16 [LYS] | X:15 [A] | ❌ 3WBM_A_X |
| A:367 [ALA] | C:1938 [A] | A:17 [LYS] | X:12 [C] | ❌ 2BH2_A_C |
| A:367 [ALA] | C:1937 [A] | A:17 [LYS] | X:11 [C] | ❌ 2BH2_A_C |
| A:366 [ARG] | C:1942 [C] | A:16 [LYS] | X:16 [C] | ❌ 3WBM_X:16 no longer at interface |
| A:417 [PHE] | C:1940 [U] | A:76 [VAL] | X:14 [G] | ❌ 3WBM_A:76 no longer at interface |
| A:420 [THR] | C:1940 [U] | A:86 [ARG] | X:14 [G] | ❌ 3WBM_A:86 no longer at interface |
| A:363 [ASP] | C:1938 [A] | A:13 [LEU] | X:12 [C] | ❌ 2BH2_A:363 no longer at interface |
| A:363 [ASP] | C:1937 [A] | A:13 [LEU] | X:11 [C] | ❌ 2BH2_A:363 no longer at interface |
| A:364 [PRO] | C:1938 [A] | A:14 [ILE] | X:12 [C] | ❌ 2BH2_A:364 no longer at interface |
| A:369 [ALA] | C:1938 [A] | A:22 [TYR] | X:12 [C] | ❌ 2BH2_A:369 no longer at interface |
| A:389 [CYS] | C:1940 [U] | A:42 [ARG] | X:14 [G] | ❌ 2BH2_A:389 no longer at interface |
| A:389 [CYS] | C:1938 [A] | A:42 [ARG] | X:12 [C] | ❌ 2BH2_A:389 no longer at interface |
Export the table of contacts
Properties of this pair
|
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.59 | 2.98 | 0.00 | 0.67 | 0.19 | 0.45 | 0.67 | 0.28 | 0.15 | 0.00 | 0.64 |
Other pairs involving 2BH2_A_C or 3WBM_A_X
Total number of entries: 4
| Interface 1 | Interface 2 |
Percentage conservation |
Interface TM-score |
Interface RMSD |
Percentage identity |
Common ECOD label(s) |
Common RFAM label(s) |
Explore both interfaces |
|---|---|---|---|---|---|---|---|---|
| 2BH2_A_C | 3BT7_A_C | 0.69 | 0.8 | 2.43 | 0.16 | S-adenosyl-L-methionine-dependent methyltransferases | compare | |
| 2BH2_A_C | 3WBM_A_X | 0.28 | 0.59 | 2.98 | 0.0 | compare | ||
| 2BH2_A_C | 5ZQ8_B_C | 0.80 | 0.88 | 1.15 | 0.0 | S-adenosyl-L-methionine-dependent methyltransferases | compare | |
| 3WBM_A_X | 7C79_G_A | 0.45 | 0.62 | 1.27 | 0.27 | AlbA-like | compare |