Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
2BH2_A
|
2BH2_C
|
5ZQ8_B
|
5ZQ8_C
|
Conserved?
|
---|---|---|---|---|
A:132 [ARG] | C:1938 [A] | B:131 [GLN] | C:746 [U] | ✔ |
A:132 [ARG] | C:1940 [U] | B:131 [GLN] | C:748 [G] | ✔ |
A:132 [ARG] | C:1941 [C] | B:131 [GLN] | C:749 [A] | ✔ |
A:132 [ARG] | C:1942 [C] | B:131 [GLN] | C:750 [A] | ✔ |
A:128 [ARG] | C:1940 [U] | B:127 [ARG] | C:748 [G] | ✔ |
A:365 [ALA] | C:1938 [A] | B:383 [PRO] | C:746 [U] | ✔ |
A:150 [LYS] | C:1941 [C] | B:147 [ARG] | C:749 [A] | ✔ |
A:150 [LYS] | C:1942 [C] | B:147 [ARG] | C:750 [A] | ✔ |
A:417 [PHE] | C:1940 [U] | B:436 [PHE] | C:748 [G] | ✔ |
A:88 [GLY] | C:1940 [U] | B:79 [GLY] | C:748 [G] | ✔ |
A:88 [GLY] | C:1941 [C] | B:79 [GLY] | C:749 [A] | ✔ |
A:151 [ALA] | C:1941 [C] | B:148 [LYS] | C:749 [A] | ✔ |
A:151 [ALA] | C:1942 [C] | B:148 [LYS] | C:750 [A] | ✔ |
A:130 [ARG] | C:1938 [A] | B:129 [LYS] | C:746 [U] | ✔ |
A:130 [ARG] | C:1940 [U] | B:129 [LYS] | C:748 [G] | ✔ |
A:154 [SER] | C:1943 [U] | B:151 [HIS] | C:751 [A] | ✔ |
A:420 [THR] | C:1940 [U] | B:439 [THR] | C:748 [G] | ✔ |
A:149 [ARG] | C:1941 [C] | B:146 [PHE] | C:749 [A] | ✔ |
A:149 [ARG] | C:1942 [C] | B:146 [PHE] | C:750 [A] | ✔ |
A:422 [HIS] | C:1940 [U] | B:441 [HIS] | C:748 [G] | ✔ |
A:422 [HIS] | C:1941 [C] | B:441 [HIS] | C:749 [A] | ✔ |
A:266 [VAL] | C:1940 [U] | B:284 [VAL] | C:748 [G] | ✔ |
A:152 [GLY] | C:1941 [C] | B:149 [ASN] | C:749 [A] | ✔ |
A:152 [GLY] | C:1942 [C] | B:149 [ASN] | C:750 [A] | ✔ |
A:152 [GLY] | C:1943 [U] | B:149 [ASN] | C:751 [A] | ✔ |
A:366 [ARG] | C:1938 [A] | B:384 [ARG] | C:746 [U] | ✔ |
A:366 [ARG] | C:1940 [U] | B:384 [ARG] | C:748 [G] | ✔ |
A:366 [ARG] | C:1941 [C] | B:384 [ARG] | C:749 [A] | ✔ |
A:366 [ARG] | C:1942 [C] | B:384 [ARG] | C:750 [A] | ✔ |
A:131 [ALA] | C:1940 [U] | B:130 [ALA] | C:748 [G] | ✔ |
A:89 [GLY] | C:1940 [U] | B:80 [ILE] | C:748 [G] | ✔ |
A:89 [GLY] | C:1941 [C] | B:80 [ILE] | C:749 [A] | ✔ |
A:148 [PHE] | C:1940 [U] | B:145 [PHE] | C:748 [G] | ✔ |
A:148 [PHE] | C:1941 [C] | B:145 [PHE] | C:749 [A] | ✔ |
A:153 [SER] | C:1942 [C] | B:150 [SER] | C:750 [A] | ✔ |
A:153 [SER] | C:1943 [U] | B:150 [SER] | C:751 [A] | ✔ |
A:365 [ALA] | C:1937 [A] | B:383 [PRO] | C:745 [G] | ❌ 5ZQ8_B_C |
A:154 [SER] | C:1942 [C] | B:151 [HIS] | C:750 [A] | ❌ 2BH2_A_C |
A:367 [ALA] | C:1936 [A] | B:385 [LYS] | C:744 [C] | ❌ 2BH2_A_C |
A:341 [GLU] | C:1937 [A] | B:359 [ASP] | C:745 [G] | ❌ 5ZQ8_B:359 no longer at interface |
A:90 [CYS] | C:1940 [U] | B:81 [ALA] | C:748 [G] | ❌ 5ZQ8_B:81 no longer at interface |
A:315 [GLU] | C:1937 [A] | B:333 [GLU] | C:745 [G] | ❌ 5ZQ8_B:333 no longer at interface |
A:342 [ASN] | C:1937 [A] | B:360 [THR] | C:745 [G] | ❌ 5ZQ8_B:360 no longer at interface |
A:91 [GLN] | C:1940 [U] | B:82 [ASP] | C:748 [G] | ❌ 5ZQ8_B:82 no longer at interface |
A:316 [GLY] | C:1937 [A] | B:334 [LEU] | C:745 [G] | ❌ 5ZQ8_B:334 no longer at interface |
A:261 [ARG] | C:1936 [A] | B:279 [PRO] | C:744 [C] | ❌ 5ZQ8_B:279 no longer at interface |
A:317 [VAL] | C:1937 [A] | B:335 [ILE] | C:745 [G] | ❌ 5ZQ8_B:335 no longer at interface |
A:134 [SER] | C:1941 [C] | B:133 [PRO] | C:749 [A] | ❌ 2BH2_A:134 no longer at interface |
A:147 [GLY] | C:1941 [C] | B:144 [GLY] | C:749 [A] | ❌ 2BH2_A:147 no longer at interface |
A:162 [CYS] | C:1940 [U] | B:159 [PHE] | C:748 [G] | ❌ 2BH2_A:162 no longer at interface |
A:164 [ILE] | C:1940 [U] | B:161 [ILE] | C:748 [G] | ❌ 2BH2_A:164 no longer at interface |
A:165 [LEU] | C:1940 [U] | B:162 [GLN] | C:748 [G] | ❌ 2BH2_A:165 no longer at interface |
A:421 [GLY] | C:1941 [C] | B:440 [HIS] | C:749 [A] | ❌ 2BH2_A:421 no longer at interface |
A:87 [CYS] | C:1941 [C] | B:78 [SER] | C:749 [A] | ❌ 2BH2_A:87 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S-adenosyl-L-methionine-dependent methyltransferases | 0.88 | 1.15 | 0.00 | 0.93 | 0.15 | 0.61 | 0.78 | 0.80 | 0.78 | 0.50 | 0.83 |
Other pairs involving 2BH2_A_C or 5ZQ8_B_C
Total number of entries: 4
Interface 1 | Interface 2 |
Percentage conservation |
Interface TM-score |
Interface RMSD |
Percentage identity |
Common ECOD label(s) |
Common RFAM label(s) |
Explore both interfaces |
---|---|---|---|---|---|---|---|---|
2BH2_A_C | 3BT7_A_C | 0.69 | 0.8 | 2.43 | 0.16 | S-adenosyl-L-methionine-dependent methyltransferases | compare | |
2BH2_A_C | 3WBM_A_X | 0.28 | 0.59 | 2.98 | 0.0 | compare | ||
2BH2_A_C | 5ZQ8_B_C | 0.80 | 0.88 | 1.15 | 0.0 | S-adenosyl-L-methionine-dependent methyltransferases | compare | |
3BT7_A_C | 5ZQ8_B_C | 0.61 | 0.83 | 2.35 | 0.0 | S-adenosyl-L-methionine-dependent methyltransferases | compare |