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All interfaces > All interologs > Interface groups > group75 > 4Y4O_1t_1a vs 6S0X_t_a

Interface analysis


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Licorice
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RNA

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Licorice
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Common contacts -

4Y4O_1t
4Y4O_1a
6S0X_t
6S0X_a
Conserved?
1t:11 [SER] 1a:61 [G] t:6 [SER] a:62 [G] ✔
1t:11 [SER] 1a:107 [G] t:6 [SER] a:106 [G] ✔
1t:73 [HIS] 1a:132 [C] t:67 [HIS] a:132 [C] ✔
1t:73 [HIS] 1a:133 [U] t:67 [HIS] a:133 [U] ✔
1t:73 [HIS] 1a:262 [A] t:67 [HIS] a:270 [A] ✔
1t:19 [SER] 1a:322 [C] t:14 [THR] a:330 [C] ✔
1t:19 [SER] 1a:323 [U] t:14 [THR] a:331 [U] ✔
1t:12 [ALA] 1a:332 [G] t:7 [ALA] a:340 [G] ✔
1t:60 [GLU] 1a:192 [U] t:54 [VAL] a:206 [A] ✔
1t:60 [GLU] 1a:193 [C] t:54 [VAL] a:207 [G] ✔
1t:22 [ARG] 1a:323 [U] t:17 [ALA] a:331 [U] ✔
1t:16 [HIS] 1a:332 [G] t:11 [VAL] a:340 [G] ✔
1t:16 [HIS] 1a:333 [G] t:11 [VAL] a:341 [U] ✔
1t:79 [ARG] 1a:260 [G] t:73 [ARG] a:268 [G] ✔
1t:79 [ARG] 1a:261 [U] t:73 [ARG] a:269 [U] ✔
1t:79 [ARG] 1a:262 [A] t:73 [ARG] a:270 [A] ✔
1t:79 [ARG] 1a:263 [A] t:73 [ARG] a:271 [A] ✔
1t:75 [ASN] 1a:132 [C] t:69 [ASN] a:132 [C] ✔
1t:75 [ASN] 1a:262 [A] t:69 [ASN] a:270 [A] ✔
1t:75 [ASN] 1a:263 [A] t:69 [ASN] a:271 [A] ✔
1t:21 [LYS] 1a:103 [C] t:16 [LYS] a:102 [C] ✔
1t:21 [LYS] 1a:104 [G] t:16 [LYS] a:103 [G] ✔
1t:68 [LYS] 1a:196 [A] t:63 [SER] a:210 [A] ✔
1t:65 [LYS] 1a:177 [C] t:59 [LYS] a:177 [G] ✔
1t:65 [LYS] 1a:178 [C] t:59 [LYS] a:178 [G] ✔
1t:65 [LYS] 1a:194 [C] t:59 [LYS] a:208 [U] ✔
1t:65 [LYS] 1a:195 [A] t:59 [LYS] a:209 [G] ✔
1t:23 [ARG] 1a:322 [C] t:18 [GLU] a:330 [C] ✔
1t:23 [ARG] 1a:323 [U] t:18 [GLU] a:331 [U] ✔
1t:61 [SER] 1a:193 [C] t:55 [LYS] a:207 [G] ✔
1t:61 [SER] 1a:194 [C] t:55 [LYS] a:208 [U] ✔
1t:10 [LEU] 1a:61 [G] t:4 [ILE] a:62 [G] ✔
1t:10 [LEU] 1a:331 [G] t:4 [ILE] a:339 [G] ✔
1t:76 [ALA] 1a:262 [A] t:70 [LYS] a:270 [A] ✔
1t:35 [THR] 1a:1457 [G] t:30 [THR] a:1468 [G] ✔
1t:14 [LYS] 1a:103 [C] t:9 [LYS] a:102 [C] ✔
1t:14 [LYS] 1a:104 [G] t:9 [LYS] a:103 [G] ✔
1t:26 [ASN] 1a:323 [U] t:21 [ASN] a:331 [U] ✔
1t:26 [ASN] 1a:324 [G] t:21 [ASN] a:332 [G] ✔
1t:18 [GLN] 1a:104 [G] t:13 [THR] a:103 [G] ✔
1t:18 [GLN] 1a:105 [G] t:13 [THR] a:104 [G] ✔
1t:30 [LYS] 1a:323 [U] t:25 [LYS] a:331 [U] ✔
1t:39 [LYS] 1a:1456 [G] t:34 [ASN] a:1467 [A] ✔
1t:39 [LYS] 1a:1457 [G] t:34 [ASN] a:1468 [G] ✔
1t:25 [ARG] 1a:174 [C] t:20 [ARG] a:174 [A] ✔
1t:25 [ARG] 1a:175 [C] t:20 [ARG] a:175 [C] ✔
1t:17 [ARG] 1a:103 [C] t:12 [LYS] a:102 [C] ✔
1t:64 [ASP] 1a:185 [A] t:58 [ASP] a:184 [A] ✔
1t:64 [ASP] 1a:193 [C] t:58 [ASP] a:207 [G] ✔
1t:64 [ASP] 1a:194 [C] t:58 [ASP] a:208 [U] ✔
1t:15 [ARG] 1a:106 [C] t:10 [ARG] a:105 [C] ✔
1t:15 [ARG] 1a:107 [G] t:10 [ARG] a:106 [G] ✔
1t:15 [ARG] 1a:108 [G] t:10 [ARG] a:107 [G] ✔
1t:89 [ARG] 1a:187 [C] t:80 [THR] a:186 [U] ✔
1t:89 [ARG] 1a:188 [C] t:80 [THR] a:187 [U] ✔
1t:82 [SER] 1a:186 [C] t:75 [LYS] a:185 [U] ✔
1t:82 [SER] 1a:187 [C] t:75 [LYS] a:186 [U] ✔
1t:29 [LYS] 1a:176 [C] t:24 [GLN] a:176 [C] ✔
1t:78 [ALA] 1a:185 [A] t:72 [ASP] a:184 [A] ✔
1t:78 [ALA] 1a:186 [C] t:72 [ASP] a:185 [U] ✔
1t:12 [ALA] 1a:108 [G] t:7 [ALA] a:107 [G] ❌ 6S0X_t_a
1t:60 [GLU] 1a:185 [A] t:54 [VAL] a:184 [A] ❌ 6S0X_t_a
1t:60 [GLU] 1a:186 [C] t:54 [VAL] a:185 [U] ❌ 6S0X_t_a
1t:22 [ARG] 1a:105 [G] t:17 [ALA] a:104 [G] ❌ 6S0X_t_a
1t:22 [ARG] 1a:324 [G] t:17 [ALA] a:332 [G] ❌ 6S0X_t_a
1t:68 [LYS] 1a:177 [C] t:63 [SER] a:177 [G] ❌ 6S0X_t_a
1t:68 [LYS] 1a:194 [C] t:63 [SER] a:208 [U] ❌ 6S0X_t_a
1t:68 [LYS] 1a:195 [A] t:63 [SER] a:209 [G] ❌ 6S0X_t_a
1t:68 [LYS] 1a:223 [U] t:63 [SER] a:231 [U] ❌ 6S0X_t_a
1t:10 [LEU] 1a:332 [G] t:4 [ILE] a:340 [G] ❌ 6S0X_t_a
1t:83 [ARG] 1a:259 [G] t:76 [SER] a:267 [G] ❌ 6S0X_t_a
1t:83 [ARG] 1a:260 [G] t:76 [SER] a:268 [G] ❌ 6S0X_t_a
1t:83 [ARG] 1a:261 [U] t:76 [SER] a:269 [U] ❌ 6S0X_t_a
1t:76 [ALA] 1a:263 [A] t:70 [LYS] a:271 [A] ❌ 6S0X_t_a
1t:17 [ARG] 1a:102 [G] t:12 [LYS] a:101 [G] ❌ 6S0X_t_a
1t:29 [LYS] 1a:175 [C] t:24 [GLN] a:175 [C] ❌ 6S0X_t_a
1t:15 [ARG] 1a:323 [U] t:10 [ARG] a:331 [U] ❌ 4Y4O_1t_1a
1t:25 [ARG] 1a:176 [C] t:20 [ARG] a:176 [C] ❌ 4Y4O_1t_1a
1t:25 [ARG] 1a:104 [G] t:20 [ARG] a:103 [G] ❌ 4Y4O_1t_1a
1t:25 [ARG] 1a:105 [G] t:20 [ARG] a:104 [G] ❌ 4Y4O_1t_1a
1t:27 [LYS] 1a:323 [U] t:22 [ILE] a:331 [U] ❌ 4Y4O_1t_1a
1t:29 [LYS] 1a:177 [C] t:24 [GLN] a:177 [G] ❌ 4Y4O_1t_1a
1t:38 [LYS] 1a:1457 [G] t:33 [LYS] a:1468 [G] ❌ 4Y4O_1t_1a
1t:38 [LYS] 1a:1456 [G] t:33 [LYS] a:1467 [A] ❌ 4Y4O_1t_1a
1t:60 [GLU] 1a:194 [C] t:54 [VAL] a:208 [U] ❌ 4Y4O_1t_1a
1t:61 [SER] 1a:178 [C] t:55 [LYS] a:178 [G] ❌ 4Y4O_1t_1a
1t:76 [ALA] 1a:261 [U] t:70 [LYS] a:269 [U] ❌ 4Y4O_1t_1a
1t:76 [ALA] 1a:260 [G] t:70 [LYS] a:268 [G] ❌ 4Y4O_1t_1a
1t:78 [ALA] 1a:187 [C] t:72 [ASP] a:186 [U] ❌ 4Y4O_1t_1a
1t:82 [SER] 1a:185 [A] t:75 [LYS] a:184 [A] ❌ 4Y4O_1t_1a
1t:82 [SER] 1a:193 [C] t:75 [LYS] a:207 [G] ❌ 4Y4O_1t_1a
1t:83 [ARG] 1a:186 [C] t:76 [SER] a:185 [U] ❌ 4Y4O_1t_1a
1t:83 [ARG] 1a:187 [C] t:76 [SER] a:186 [U] ❌ 4Y4O_1t_1a
1t:14 [LYS] 1a:102 [G] t:9 [LYS] a:101 [G] ❌ 4Y4O_1t_1a
1t:11 [SER] 1a:62 [U] t:6 [SER] a:63 [U] ❌ 6S0X_a:63 no longer at interface
1t:31 [SER] 1a:1458 [G] t:26 [SER] a:1469 [C] ❌ 6S0X_t:26, 6S0X_a:1469 no longer at interface
1t:31 [SER] 1a:1459 [C] t:26 [SER] a:1470 [U] ❌ 6S0X_t:26, 6S0X_a:1470 no longer at interface
1t:27 [LYS] 1a:1458 [G] t:22 [ILE] a:1469 [C] ❌ 6S0X_a:1469 no longer at interface
1t:27 [LYS] 1a:1459 [C] t:22 [ILE] a:1470 [U] ❌ 6S0X_a:1470 no longer at interface
1t:75 [ASN] 1a:131 [C] t:69 [ASN] a:131 [C] ❌ 6S0X_a:131 no longer at interface
1t:21 [LYS] 1a:150 [C] t:16 [LYS] a:150 [U] ❌ 6S0X_a:150 no longer at interface
1t:28 [ALA] 1a:1458 [G] t:23 [SER] a:1469 [C] ❌ 6S0X_t:23, 6S0X_a:1469 no longer at interface
1t:28 [ALA] 1a:1459 [C] t:23 [SER] a:1470 [U] ❌ 6S0X_t:23, 6S0X_a:1470 no longer at interface
1t:74 [LYS] 1a:184 [G] t:68 [SER] a:183 [U] ❌ 6S0X_t:68, 6S0X_a:183 no longer at interface
1t:74 [LYS] 1a:224 [C] t:68 [SER] a:232 [A] ❌ 6S0X_t:68, 6S0X_a:232 no longer at interface
1t:74 [LYS] 1a:225 [C] t:68 [SER] a:233 [U] ❌ 6S0X_t:68, 6S0X_a:233 no longer at interface
1t:10 [LEU] 1a:60 [A] t:4 [ILE] a:61 [A] ❌ 6S0X_a:61 no longer at interface
1t:35 [THR] 1a:1458 [G] t:30 [THR] a:1469 [C] ❌ 6S0X_a:1469 no longer at interface
1t:32 [ALA] 1a:1458 [G] t:27 [ALA] a:1469 [C] ❌ 6S0X_t:27, 6S0X_a:1469 no longer at interface
1t:38 [LYS] 1a:1439 [C] t:33 [LYS] a:1448 [G] ❌ 6S0X_a:1448 no longer at interface
1t:38 [LYS] 1a:1440 [C] t:33 [LYS] a:1449 [G] ❌ 6S0X_a:1449 no longer at interface
1t:58 [LYS] 1a:1452 [C] t:52 [LEU] a:1459 [C] ❌ 6S0X_t:52, 6S0X_a:1459 no longer at interface
1t:24 [LEU] 1a:1459 [C] t:19 [ALA] a:1470 [U] ❌ 6S0X_t:19, 6S0X_a:1470 no longer at interface
1t:34 [LYS] 1a:1437 [C] t:29 [ARG] a:1446 [C] ❌ 6S0X_t:29, 6S0X_a:1446 no longer at interface
1t:34 [LYS] 1a:1438 [G] t:29 [ARG] a:1447 [C] ❌ 6S0X_t:29, 6S0X_a:1447 no longer at interface
1t:8 [ARG] 1a:351 [G] t:2 [ALA] a:359 [G] ❌ 4Y4O_1t:8, 4Y4O_1a:351 no longer at interface
1t:9 [ASN] 1a:350 [G] t:3 [ASN] a:358 [G] ❌ 4Y4O_1t:9, 4Y4O_1a:350 no longer at interface
1t:61 [SER] 1a:179 [A] t:55 [LYS] a:179 [A] ❌ 4Y4O_1a:179 no longer at interface
1t:36 [LEU] 1a:1456 [G] t:31 [ALA] a:1467 [A] ❌ 6S0X_t:31 no longer at interface
1t:36 [LEU] 1a:1457 [G] t:31 [ALA] a:1468 [G] ❌ 6S0X_t:31 no longer at interface
1t:81 [LYS] 1a:185 [A] t:74 [ILE] a:184 [A] ❌ 6S0X_t:74 no longer at interface
1t:81 [LYS] 1a:186 [C] t:74 [ILE] a:185 [U] ❌ 6S0X_t:74 no longer at interface
1t:81 [LYS] 1a:193 [C] t:74 [ILE] a:207 [G] ❌ 6S0X_t:74 no longer at interface
1t:74 [LYS] 1a:185 [A] t:68 [SER] a:184 [A] ❌ 6S0X_t:68 no longer at interface
1t:57 [ARG] 1a:192 [U] t:51 [SER] a:206 [A] ❌ 6S0X_t:51 no longer at interface
1t:57 [ARG] 1a:193 [C] t:51 [SER] a:207 [G] ❌ 6S0X_t:51 no longer at interface
1t:77 [ALA] 1a:185 [A] t:71 [ALA] a:184 [A] ❌ 6S0X_t:71 no longer at interface
1t:54 [LYS] 1a:1456 [G] t:49 [LEU] a:1467 [A] ❌ 6S0X_t:49 no longer at interface
1t:32 [ALA] 1a:1457 [G] t:27 [ALA] a:1468 [G] ❌ 6S0X_t:27 no longer at interface
1t:51 [GLU] 1a:1456 [G] t:46 [LYS] a:1467 [A] ❌ 6S0X_t:46 no longer at interface
1t:85 [MET] 1a:186 [C] t:78 [LEU] a:185 [U] ❌ 6S0X_t:78 no longer at interface
1t:85 [MET] 1a:187 [C] t:78 [LEU] a:186 [U] ❌ 6S0X_t:78 no longer at interface
1t:85 [MET] 1a:191 [G] t:78 [LEU] a:205 [A] ❌ 6S0X_t:78 no longer at interface
1t:85 [MET] 1a:192 [U] t:78 [LEU] a:206 [A] ❌ 6S0X_t:78 no longer at interface
1t:43 [LEU] 1a:1456 [G] t:38 [ALA] a:1467 [A] ❌ 6S0X_t:38 no longer at interface
1t:8 [ARG] 1a:331 [G] t:2 [ALA] a:339 [G] ❌ 4Y4O_1t:8 no longer at interface
1t:9 [ASN] 1a:332 [G] t:3 [ASN] a:340 [G] ❌ 4Y4O_1t:9 no longer at interface
1t:9 [ASN] 1a:331 [G] t:3 [ASN] a:339 [G] ❌ 4Y4O_1t:9 no longer at interface
1t:67 [ALA] 1a:223 [U] t:61 [ALA] a:231 [U] ❌ 4Y4O_1t:67 no longer at interface
1t:69 [GLY] 1a:325 [A] t:64 [ASN] a:333 [A] ❌ 4Y4O_1t:69 no longer at interface
1t:69 [GLY] 1a:324 [G] t:64 [ASN] a:332 [G] ❌ 4Y4O_1t:69 no longer at interface
1t:84 [LEU] 1a:259 [G] t:77 [GLN] a:267 [G] ❌ 4Y4O_1t:84 no longer at interface
1t:84 [LEU] 1a:258 [G] t:77 [GLN] a:266 [A] ❌ 4Y4O_1t:84 no longer at interface
1t:88 [VAL] 1a:187 [C] t:79 [MET] a:186 [U] ❌ 4Y4O_1t:88 no longer at interface
1t:88 [VAL] 1a:186 [C] t:79 [MET] a:185 [U] ❌ 4Y4O_1t:88 no longer at interface
1t:88 [VAL] 1a:188 [C] t:79 [MET] a:187 [U] ❌ 4Y4O_1t:88 no longer at interface
1t:88 [VAL] 1a:191 [G] t:79 [MET] a:205 [A] ❌ 4Y4O_1t:88 no longer at interface
1t:88 [VAL] 1a:192 [U] t:79 [MET] a:206 [A] ❌ 4Y4O_1t:88 no longer at interface
1t:13 [LEU] 1a:102 [G] t:8 [ILE] a:101 [G] ❌ 4Y4O_1t:13 no longer at interface
1t:92 [LEU] 1a:188 [C] t:81 [ALA] a:187 [U] ❌ 4Y4O_1t:92 no longer at interface
1t:98 [PRO] 1a:187 [C] t:82 [ASN] a:186 [U] ❌ 4Y4O_1t:98 no longer at interface
1t:98 [PRO] 1a:188 [C] t:82 [ASN] a:187 [U] ❌ 4Y4O_1t:98 no longer at interface
1t:98 [PRO] 1a:191 [G] t:82 [ASN] a:205 [A] ❌ 4Y4O_1t:98 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S20 Bacterial small subunit ribosomal RNA 0.94 3.25 0.34 0.72 0.95 0.75 0.91 0.51 0.44 0.09 0.63


Other pairs involving 4Y4O_1t_1a or 6S0X_t_a

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
2VQE_T_A 6S0X_t_a 0.43 0.95 3.18 0.3 Ribosomal protein S20 Bacterial small subunit ribosomal RNA compare
2VQE_T_A 4Y4O_1t_1a 0.85 0.99 1.0 0.87 Ribosomal protein S20 Bacterial small subunit ribosomal RNA compare
4Y4O_1t_1a 7RYG_t_a 0.41 0.91 2.68 0.25 Ribosomal protein S20 Bacterial small subunit ribosomal RNA compare
4Y4O_1t_1a 6S0X_t_a 0.51 0.94 3.25 0.34 Ribosomal protein S20 Bacterial small subunit ribosomal RNA compare
4Y4O_1t_1a 7K00_T_A 0.70 0.97 1.35 0.39 Ribosomal protein S20 Bacterial small subunit ribosomal RNA compare
6S0X_t_a 7K00_T_A 0.54 0.95 3.16 0.36 Ribosomal protein S20 Bacterial small subunit ribosomal RNA compare
6S0X_t_a 7RYG_t_a 0.56 0.96 2.34 0.41 Ribosomal protein S20 Bacterial small subunit ribosomal RNA compare