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All interfaces > All interologs > Interface groups > group76 > 2Y8Y_A_B vs 5H9F_K_L

Interface analysis


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Licorice
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Licorice
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Common contacts -

2Y8Y_A
2Y8Y_B
5H9F_K
5H9F_L
Conserved?
A:106 [ARG] B:16 [G] K:95 [THR] L:56 [G] ✔
A:106 [ARG] B:17 [U] K:95 [THR] L:57 [C] ✔
A:112 [LYS] B:5 [U] K:112 [CYS] L:45 [U] ✔
A:112 [LYS] B:6 [C] K:112 [CYS] L:46 [C] ✔
A:104 [ALA] B:17 [U] K:93 [ILE] L:57 [C] ✔
A:107 [LEU] B:16 [G] K:96 [ILE] L:56 [G] ✔
A:113 [ARG] B:7 [C] K:113 [ARG] L:47 [C] ✔
A:113 [ARG] B:8 [C] K:113 [ARG] L:48 [C] ✔
A:113 [ARG] B:19 [G] K:113 [ARG] L:59 [G] ✔
A:113 [ARG] B:20 [G] K:113 [ARG] L:60 [G] ✔
A:197 [GLY] B:19 [G] K:184 [GLY] L:59 [G] ✔
A:114 [VAL] B:5 [U] K:114 [VAL] L:45 [U] ✔
A:115 [ALA] B:5 [U] K:115 [PRO] L:45 [U] ✔
A:200 [LYS] B:20 [G] K:187 [LYS] L:60 [G] ✔
A:105 [LYS] B:17 [U] K:94 [LYS] L:57 [C] ✔
A:194 [ARG] B:20 [G] K:181 [GLN] L:60 [G] ✔
A:169 [LEU] B:6 [C] K:156 [GLY] L:46 [C] ✔
A:43 [ARG] B:20 [G] K:36 [ASP] L:60 [G] ✔
A:106 [ARG] B:8 [C] K:95 [THR] L:48 [C] ❌ 5H9F_K_L
A:106 [ARG] B:18 [G] K:95 [THR] L:58 [G] ❌ 5H9F_K_L
A:106 [ARG] B:19 [G] K:95 [THR] L:59 [G] ❌ 5H9F_K_L
A:112 [LYS] B:7 [C] K:112 [CYS] L:47 [C] ❌ 5H9F_K_L
A:107 [LEU] B:5 [U] K:96 [ILE] L:45 [U] ❌ 5H9F_K_L
A:113 [ARG] B:6 [C] K:113 [ARG] L:46 [C] ❌ 5H9F_K_L
A:197 [GLY] B:20 [G] K:184 [GLY] L:60 [G] ❌ 5H9F_K_L
A:117 [LYS] B:5 [U] K:117 [ILE] L:45 [U] ❌ 5H9F_K_L
A:200 [LYS] B:19 [G] K:187 [LYS] L:59 [G] ❌ 5H9F_K_L
A:105 [LYS] B:16 [G] K:94 [LYS] L:56 [G] ❌ 5H9F_K_L
A:194 [ARG] B:19 [G] K:181 [GLN] L:59 [G] ❌ 5H9F_K_L
A:113 [ARG] B:5 [U] K:113 [ARG] L:45 [U] ❌ 2Y8Y_A_B
A:113 [ARG] B:18 [G] K:113 [ARG] L:58 [G] ❌ 2Y8Y_A_B
A:169 [LEU] B:5 [U] K:156 [GLY] L:45 [U] ❌ 2Y8Y_A_B
A:104 [ALA] B:5 [U] K:93 [ILE] L:45 [U] ❌ 2Y8Y_A_B
A:104 [ALA] B:18 [G] K:93 [ILE] L:58 [G] ❌ 2Y8Y_A_B
A:106 [ARG] B:9 [C] K:95 [THR] L:49 [C] ❌ 5H9F_L:49 no longer at interface
A:106 [ARG] B:10 [A] K:95 [THR] L:50 [G] ❌ 5H9F_L:50 no longer at interface
A:105 [LYS] B:15 [U] K:94 [LYS] L:55 [A] ❌ 5H9F_L:55 no longer at interface
A:171 [VAL] B:21 [DG] K:158 [ILE] L:61 [23G] ❌ 2Y8Y_A:171, 2Y8Y_B:21 no longer at interface
A:199 [GLY] B:21 [DG] K:186 [ALA] L:61 [23G] ❌ 2Y8Y_A:199, 2Y8Y_B:21 no longer at interface
A:201 [ALA] B:21 [DG] K:188 [SER] L:61 [23G] ❌ 2Y8Y_B:21 no longer at interface
A:26 [HIS] B:21 [DG] K:20 [HIS] L:61 [23G] ❌ 2Y8Y_B:21 no longer at interface
A:27 [ARG] B:21 [DG] K:21 [GLN] L:61 [23G] ❌ 2Y8Y_B:21 no longer at interface
A:43 [ARG] B:21 [DG] K:36 [ASP] L:61 [23G] ❌ 2Y8Y_B:21 no longer at interface
A:128 [ARG] B:17 [U] K:128 [ARG] L:57 [C] ❌ 5H9F_K:128 no longer at interface
A:128 [ARG] B:18 [G] K:128 [ARG] L:58 [G] ❌ 5H9F_K:128 no longer at interface
A:195 [GLY] B:19 [G] K:182 [GLY] L:59 [G] ❌ 5H9F_K:182 no longer at interface
A:132 [GLU] B:17 [U] K:131 [GLY] L:57 [C] ❌ 5H9F_K:131 no longer at interface
A:132 [GLU] B:18 [G] K:131 [GLY] L:58 [G] ❌ 5H9F_K:131 no longer at interface
A:129 [ARG] B:18 [G] K:129 [LYS] L:58 [G] ❌ 5H9F_K:129 no longer at interface
A:129 [ARG] B:19 [G] K:129 [LYS] L:59 [G] ❌ 5H9F_K:129 no longer at interface
A:125 [TRP] B:18 [G] K:125 [TRP] L:58 [G] ❌ 2Y8Y_A:125 no longer at interface
A:170 [GLN] B:5 [U] K:157 [LYS] L:45 [U] ❌ 2Y8Y_A:170 no longer at interface
A:170 [GLN] B:6 [C] K:157 [LYS] L:46 [C] ❌ 2Y8Y_A:170 no longer at interface
A:171 [VAL] B:5 [U] K:158 [ILE] L:45 [U] ❌ 2Y8Y_A:171 no longer at interface
A:171 [VAL] B:6 [C] K:158 [ILE] L:46 [C] ❌ 2Y8Y_A:171 no longer at interface
A:172 [GLN] B:5 [U] K:159 [GLN] L:45 [U] ❌ 2Y8Y_A:172 no longer at interface
A:198 [PRO] B:19 [G] K:185 [PRO] L:59 [G] ❌ 2Y8Y_A:198 no longer at interface
A:102 [ASN] B:5 [U] K:91 [ASN] L:45 [U] ❌ 2Y8Y_A:102 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
CRISPR transcript (pre-crRNA) processing endoribonuclease-related 0.72 1.89 0.22 0.89 0.25 0.63 0.69 0.37 0.41 0.17 0.60


Other pairs involving 2Y8Y_A_B or 5H9F_K_L

Total number of entries: 6

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4C8Y_A_C 5H9F_K_L 0.16 0.56 2.78 0.07 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare
5H9F_K_L 6H9H_B_E 0.27 0.55 3.17 0.07 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare
4ILL_A_R 5H9F_K_L 0.31 0.57 3.39 0.11 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare
2Y8Y_A_B 4C8Y_A_C 0.36 0.63 3.01 0.13 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare
2Y8Y_A_B 5H9F_K_L 0.37 0.72 1.89 0.22 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare
2Y8Y_A_B 4ILL_A_R 0.19 0.65 4.71 0.03 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare