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All interfaces > All interologs > Interface groups > group76 > 4ILL_A_R

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Protein

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

4ILL_A
4ILL_R
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:22 [PRO] R:17 [A] 4.29 59.94
A:25 [LYS] R:17 [A] 3.58 93.14
A:28 [LYS] R:16 [A] 3.63 R:6 [U] 98.0
A:28 [LYS] R:17 [A] 3.1 98.0
A:28 [LYS] R:19 [U] 4.99 98.0
A:29 [TYR] R:17 [A] 4.58 59.34
A:29 [TYR] R:20 [G] 3.58 base:SC 59.34
A:32 [GLN] R:17 [A] 3.17 base:SC 47.17
A:32 [GLN] R:19 [U] 3.41 base/AA stacks 47.17
A:33 [SER] R:20 [G] 3.14 82.44
A:41 [LYS] R:19 [U] 4.94 53.84
A:41 [LYS] R:20 [G] 3.64 53.84
A:41 [LYS] R:21 [A] 3.27 53.84
A:44 [ILE] R:16 [A] 4.09 R:6 [U] 76.15
A:45 [THR] R:19 [U] 3.51 18.54
A:46 [SER] R:15 [G] 3.97 R:7 [C] 94.46
A:47 [ARG] R:9 [A] 3.43 70.91
A:47 [ARG] R:11 [U] 3.47 70.91
A:47 [ARG] R:14 [A] 3.43 R:8 [U] 70.91
A:47 [ARG] R:15 [G] 3.85 R:7 [C] 70.91
A:48 [ASP] R:11 [U] 2.57 base:SC 64.56
A:48 [ASP] R:14 [A] 3.93 R:8 [U] 64.56
A:48 [ASP] R:15 [G] 3.45 R:7 [C] 64.56
A:49 [LYS] R:11 [U] 3.44 base:BB 73.26
A:49 [LYS] R:12 [A] 3.03 73.26
A:49 [LYS] R:13 [U] 3.77 73.26
A:49 [LYS] R:14 [A] 3.42 R:8 [U] 73.26
A:49 [LYS] R:15 [G] 4.3 R:7 [C] 73.26
A:50 [TYR] R:13 [U] 2.88 sugar:SC 70.04
A:50 [TYR] R:14 [A] 3.35 R:8 [U] 70.04
A:50 [TYR] R:15 [G] 3.2 R:7 [C] 70.04
A:51 [LYS] R:15 [G] 3.04 R:7 [C] 98.0
A:51 [LYS] R:16 [A] 2.72 R:6 [U] 98.0
A:146 [LEU] R:16 [A] 4.82 R:6 [U] 74.87
A:148 [SER] R:13 [U] 3.8 94.56
A:148 [SER] R:14 [A] 2.99 R:8 [U] 94.56
A:150 [LYS] R:13 [U] 3.1 96.05
A:151 [VAL] R:13 [U] 3.52 78.0
A:151 [VAL] R:14 [A] 4.19 R:8 [U] 78.0
A:153 [LEU] R:13 [U] 3.72 77.22
A:154 [PRO] R:13 [U] 4.26 89.68
A:155 [PRO] R:13 [U] 3.39 91.44
A:158 [SER] R:13 [U] 3.63 42.09
A:162 [LYS] R:10 [C] 2.84 base:SC 74.97
A:162 [LYS] R:12 [A] 3.42 sugar:SC 74.97
A:162 [LYS] R:13 [U] 4.02 74.97
A:164 [ILE] R:13 [U] 4.62 52.28
A:165 [HIS] R:5 [A] 4.15 59.83
A:166 [ALA] R:5 [A] 4.37 28.84
A:167 [GLY] R:5 [A] 3.24 75.5
A:168 [TYR] R:5 [A] 2.67 base:BB, base:BB 64.18
A:168 [TYR] R:6 [U] 2.62 R:16 [A] base:SC 64.18
A:168 [TYR] R:15 [G] 4.82 R:7 [C] 64.18
A:168 [TYR] R:16 [A] 4.06 R:6 [U] 64.18
A:170 [THR] R:5 [A] 4.37 76.52
A:180 [TYR] R:13 [U] 4.08 71.34
A:180 [TYR] R:14 [A] 2.46 R:8 [U] 71.34
A:220 [THR] R:5 [A] 3.29 96.1
A:223 [ILE] R:6 [U] 4.39 R:16 [A] 78.09
A:223 [ILE] R:16 [A] 3.76 R:6 [U] 78.09
A:227 [SER] R:7 [C] 3.81 R:15 [G] 21.3
A:227 [SER] R:17 [A] 4.5 21.3
A:230 [ASN] R:7 [C] 3.3 R:15 [G] 68.03
A:231 [LEU] R:6 [U] 3.5 R:16 [A] 74.35
A:231 [LEU] R:7 [C] 4.71 R:15 [G] 74.35
A:232 [ARG] R:6 [U] 3.3 R:16 [A] 96.98
A:232 [ARG] R:7 [C] 3.25 R:15 [G] base:SC 96.98
A:232 [ARG] R:15 [G] 4.46 R:7 [C] 96.98
A:232 [ARG] R:16 [A] 3.59 R:6 [U] 96.98
A:232 [ARG] R:17 [A] 4.33 96.98
A:233 [LYS] R:5 [A] 3.64 46.88
A:233 [LYS] R:6 [U] 3.38 R:16 [A] sugar:BB 46.88
A:234 [ALA] R:5 [A] 3.52 73.8
A:234 [ALA] R:6 [U] 4.17 R:16 [A] 73.8
A:235 [ARG] R:4 [A] 3.88 94.27
A:235 [ARG] R:5 [A] 3.53 94.27
A:267 [GLY] R:14 [A] 4.98 R:8 [U] 97.1
A:267 [GLY] R:15 [G] 4.8 R:7 [C] 97.1
A:268 [ARG] R:6 [U] 4.51 R:16 [A] 89.36
A:268 [ARG] R:7 [C] 4.23 R:15 [G] 89.36
A:268 [ARG] R:14 [A] 2.94 R:8 [U] base/AA stacks 89.36
A:268 [ARG] R:15 [G] 2.8 R:7 [C] base:SC, base:SC 89.36
A:268 [ARG] R:16 [A] 4.66 R:6 [U] 89.36
A:269 [SER] R:15 [G] 3.01 R:7 [C] 96.58
A:269 [SER] R:16 [A] 2.7 R:6 [U] base:SC, base:SC 96.58
A:270 [ARG] R:14 [A] 4.78 R:8 [U] 98.49
A:270 [ARG] R:15 [G] 2.76 R:7 [C] 98.49
A:270 [ARG] R:16 [A] 4.61 R:6 [U] 98.49
A:271 [GLY] R:16 [A] 3.62 R:6 [U] 97.1
A:272 [ILE] R:16 [A] 3.66 R:6 [U] 96.17
A:272 [ILE] R:17 [A] 3.96 96.17

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group76 4ILL_A_R A: Crispr-associated endoribonuclease cas6 2, Sulfolobus solfataricus (genetically engineered) R: N/A Q97WV8 CRISPR transcript (pre-crRNA) processing endoribonuclease-related ✘

Interologs

Total number of interologs for this interface: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4C8Y_A_C 4ILL_A_R 0.32 0.77 2.74 0.03 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare
4ILL_A_R 5H9F_K_L 0.31 0.57 3.39 0.11 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare
2Y8Y_A_B 4ILL_A_R 0.19 0.65 4.71 0.03 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare