Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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Focus on
InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
4ILL_A
|
4ILL_R
|
5H9F_K
|
5H9F_L
|
Conserved?
|
---|---|---|---|---|
A:267 [GLY] | R:14 [A] | K:184 [GLY] | L:59 [G] | ✔ |
A:232 [ARG] | R:6 [U] | K:156 [GLY] | L:45 [U] | ✔ |
A:232 [ARG] | R:7 [C] | K:156 [GLY] | L:46 [C] | ✔ |
A:148 [SER] | R:13 [U] | K:93 [ILE] | L:58 [G] | ✔ |
A:168 [TYR] | R:5 [A] | K:115 [PRO] | L:44 [U] | ✔ |
A:168 [TYR] | R:6 [U] | K:115 [PRO] | L:45 [U] | ✔ |
A:234 [ALA] | R:6 [U] | K:158 [ILE] | L:45 [U] | ✔ |
A:269 [SER] | R:16 [A] | K:186 [ALA] | L:61 [23G] | ✔ |
A:271 [GLY] | R:16 [A] | K:188 [SER] | L:61 [23G] | ✔ |
A:268 [ARG] | R:14 [A] | K:185 [PRO] | L:59 [G] | ✔ |
A:167 [GLY] | R:5 [A] | K:114 [VAL] | L:44 [U] | ✔ |
A:270 [ARG] | R:15 [G] | K:187 [LYS] | L:60 [G] | ✔ |
A:233 [LYS] | R:6 [U] | K:157 [LYS] | L:45 [U] | ✔ |
A:28 [LYS] | R:16 [A] | K:21 [GLN] | L:61 [23G] | ✔ |
A:165 [HIS] | R:5 [A] | K:112 [CYS] | L:44 [U] | ✔ |
A:146 [LEU] | R:16 [A] | K:91 [ASN] | L:61 [23G] | ❌ 5H9F_K_L |
A:267 [GLY] | R:15 [G] | K:184 [GLY] | L:60 [G] | ❌ 5H9F_K_L |
A:232 [ARG] | R:15 [G] | K:156 [GLY] | L:60 [G] | ❌ 5H9F_K_L |
A:232 [ARG] | R:16 [A] | K:156 [GLY] | L:61 [23G] | ❌ 5H9F_K_L |
A:148 [SER] | R:14 [A] | K:93 [ILE] | L:59 [G] | ❌ 5H9F_K_L |
A:168 [TYR] | R:15 [G] | K:115 [PRO] | L:60 [G] | ❌ 5H9F_K_L |
A:168 [TYR] | R:16 [A] | K:115 [PRO] | L:61 [23G] | ❌ 5H9F_K_L |
A:234 [ALA] | R:5 [A] | K:158 [ILE] | L:44 [U] | ❌ 5H9F_K_L |
A:269 [SER] | R:15 [G] | K:186 [ALA] | L:60 [G] | ❌ 5H9F_K_L |
A:164 [ILE] | R:13 [U] | K:96 [ILE] | L:58 [G] | ❌ 5H9F_K_L |
A:268 [ARG] | R:6 [U] | K:185 [PRO] | L:45 [U] | ❌ 5H9F_K_L |
A:268 [ARG] | R:7 [C] | K:185 [PRO] | L:46 [C] | ❌ 5H9F_K_L |
A:268 [ARG] | R:15 [G] | K:185 [PRO] | L:60 [G] | ❌ 5H9F_K_L |
A:268 [ARG] | R:16 [A] | K:185 [PRO] | L:61 [23G] | ❌ 5H9F_K_L |
A:270 [ARG] | R:14 [A] | K:187 [LYS] | L:59 [G] | ❌ 5H9F_K_L |
A:270 [ARG] | R:16 [A] | K:187 [LYS] | L:61 [23G] | ❌ 5H9F_K_L |
A:233 [LYS] | R:5 [A] | K:157 [LYS] | L:44 [U] | ❌ 5H9F_K_L |
A:235 [ARG] | R:4 [A] | K:159 [GLN] | L:43 [G] | ❌ 5H9F_K_L |
A:235 [ARG] | R:5 [A] | K:159 [GLN] | L:44 [U] | ❌ 5H9F_K_L |
A:170 [THR] | R:5 [A] | K:117 [ILE] | L:44 [U] | ❌ 5H9F_K_L |
A:166 [ALA] | R:5 [A] | K:113 [ARG] | L:44 [U] | ❌ 5H9F_K_L |
A:165 [HIS] | R:6 [U] | K:112 [CYS] | L:45 [U] | ❌ 4ILL_A_R |
A:165 [HIS] | R:7 [C] | K:112 [CYS] | L:46 [C] | ❌ 4ILL_A_R |
A:166 [ALA] | R:15 [G] | K:113 [ARG] | L:60 [G] | ❌ 4ILL_A_R |
A:166 [ALA] | R:6 [U] | K:113 [ARG] | L:45 [U] | ❌ 4ILL_A_R |
A:166 [ALA] | R:14 [A] | K:113 [ARG] | L:59 [G] | ❌ 4ILL_A_R |
A:166 [ALA] | R:9 [A] | K:113 [ARG] | L:48 [C] | ❌ 4ILL_A_R |
A:166 [ALA] | R:13 [U] | K:113 [ARG] | L:58 [G] | ❌ 4ILL_A_R |
A:167 [GLY] | R:6 [U] | K:114 [VAL] | L:45 [U] | ❌ 4ILL_A_R |
A:167 [GLY] | R:4 [A] | K:114 [VAL] | L:43 [G] | ❌ 4ILL_A_R |
A:168 [TYR] | R:4 [A] | K:115 [PRO] | L:43 [G] | ❌ 4ILL_A_R |
A:170 [THR] | R:4 [A] | K:117 [ILE] | L:43 [G] | ❌ 4ILL_A_R |
A:233 [LYS] | R:7 [C] | K:157 [LYS] | L:46 [C] | ❌ 4ILL_A_R |
A:234 [ALA] | R:16 [A] | K:158 [ILE] | L:61 [23G] | ❌ 4ILL_A_R |
A:234 [ALA] | R:7 [C] | K:158 [ILE] | L:46 [C] | ❌ 4ILL_A_R |
A:235 [ARG] | R:6 [U] | K:159 [GLN] | L:45 [U] | ❌ 4ILL_A_R |
A:146 [LEU] | R:6 [U] | K:91 [ASN] | L:45 [U] | ❌ 4ILL_A_R |
A:148 [SER] | R:6 [U] | K:93 [ILE] | L:45 [U] | ❌ 4ILL_A_R |
A:164 [ILE] | R:4 [A] | K:96 [ILE] | L:43 [G] | ❌ 4ILL_A_R |
A:166 [ALA] | R:8 [U] | K:113 [ARG] | L:47 [C] | ❌ 4ILL_R:8 no longer at interface |
A:272 [ILE] | R:16 [A] | K:189 [MET] | L:61 [23G] | ❌ 5H9F_K:189 no longer at interface |
A:220 [THR] | R:5 [A] | K:145 [ARG] | L:44 [U] | ❌ 5H9F_K:145 no longer at interface |
A:223 [ILE] | R:6 [U] | K:148 [TYR] | L:45 [U] | ❌ 5H9F_K:148 no longer at interface |
A:223 [ILE] | R:16 [A] | K:148 [TYR] | L:61 [23G] | ❌ 5H9F_K:148 no longer at interface |
A:169 [SER] | R:4 [A] | K:116 [LEU] | L:43 [G] | ❌ 4ILL_A:169 no longer at interface |
A:264 [LEU] | R:15 [G] | K:181 [GLN] | L:60 [G] | ❌ 4ILL_A:264 no longer at interface |
A:27 [LEU] | R:16 [A] | K:20 [HIS] | L:61 [23G] | ❌ 4ILL_A:27 no longer at interface |
A:43 [LEU] | R:15 [G] | K:36 [ASP] | L:60 [G] | ❌ 4ILL_A:43 no longer at interface |
A:43 [LEU] | R:16 [A] | K:36 [ASP] | L:61 [23G] | ❌ 4ILL_A:43 no longer at interface |
A:149 [SER] | R:4 [A] | K:94 [LYS] | L:43 [G] | ❌ 4ILL_A:149 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.57 | 3.39 | 0.11 | 0.67 | 0.16 | 0.67 | 0.69 | 0.31 | 0.19 | 0.05 | 0.22 |
Other pairs involving 4ILL_A_R or 5H9F_K_L
Total number of entries: 6
Interface 1 | Interface 2 |
Percentage conservation |
Interface TM-score |
Interface RMSD |
Percentage identity |
Common ECOD label(s) |
Common RFAM label(s) |
Explore both interfaces |
---|---|---|---|---|---|---|---|---|
2Y8Y_A_B | 5H9F_K_L | 0.37 | 0.72 | 1.89 | 0.22 | CRISPR transcript (pre-crRNA) processing endoribonuclease-related | compare | |
2Y8Y_A_B | 4ILL_A_R | 0.19 | 0.65 | 4.71 | 0.03 | CRISPR transcript (pre-crRNA) processing endoribonuclease-related | compare | |
4C8Y_A_C | 4ILL_A_R | 0.32 | 0.77 | 2.74 | 0.03 | CRISPR transcript (pre-crRNA) processing endoribonuclease-related | compare | |
4C8Y_A_C | 5H9F_K_L | 0.16 | 0.56 | 2.78 | 0.07 | CRISPR transcript (pre-crRNA) processing endoribonuclease-related | compare | |
4ILL_A_R | 5H9F_K_L | 0.31 | 0.57 | 3.39 | 0.11 | CRISPR transcript (pre-crRNA) processing endoribonuclease-related | compare | |
5H9F_K_L | 6H9H_B_E | 0.27 | 0.55 | 3.17 | 0.07 | CRISPR transcript (pre-crRNA) processing endoribonuclease-related | compare |