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All interfaces > All interologs > Interface groups > group76 > 5H9F_K_L

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

5H9F_K
5H9F_L
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
K:20 [HIS] L:61 [23G] 3.89 L:46 [C] 99.0
K:21 [GLN] L:61 [23G] 4.43 L:46 [C] 82.77
K:36 [ASP] L:60 [G] 4.31 L:47 [C] 79.6
K:36 [ASP] L:61 [23G] 3.79 L:46 [C] 79.6
K:91 [ASN] L:45 [U] 2.7 base:SC 97.91
K:93 [ILE] L:45 [U] 3.72 81.86
K:93 [ILE] L:57 [C] 4.08 L:50 [G] 81.86
K:93 [ILE] L:58 [G] 4.94 L:49 [C] 81.86
K:94 [LYS] L:43 [G] 4.01 83.47
K:94 [LYS] L:57 [C] 3.41 L:50 [G] 83.47
K:95 [THR] L:56 [G] 3.15 L:51 [C] 81.46
K:95 [THR] L:57 [C] 2.81 L:50 [G] 81.46
K:96 [ILE] L:43 [G] 4.0 75.94
K:96 [ILE] L:56 [G] 3.43 L:51 [C] 75.94
K:112 [CYS] L:44 [U] 4.91 62.03
K:112 [CYS] L:45 [U] 3.15 62.03
K:112 [CYS] L:46 [C] 3.18 L:61 [23G] 62.03
K:113 [ARG] L:45 [U] 3.11 base:BB 96.87
K:113 [ARG] L:47 [C] 4.26 L:60 [G] 96.87
K:113 [ARG] L:48 [C] 4.04 L:59 [G] 96.87
K:113 [ARG] L:58 [G] 3.8 L:49 [C] 96.87
K:113 [ARG] L:59 [G] 2.73 L:48 [C] base:SC 96.87
K:113 [ARG] L:60 [G] 2.85 L:47 [C] base:SC 96.87
K:114 [VAL] L:43 [G] 3.96 80.57
K:114 [VAL] L:44 [U] 4.03 80.57
K:114 [VAL] L:45 [U] 3.79 80.57
K:115 [PRO] L:43 [G] 3.16 sugar:BB 81.85
K:115 [PRO] L:44 [U] 4.35 81.85
K:115 [PRO] L:45 [U] 3.39 81.85
K:116 [LEU] L:43 [G] 4.31 84.66
K:117 [ILE] L:42 [A] 3.63 51.63
K:117 [ILE] L:43 [G] 3.83 51.63
K:121 [GLU] L:43 [G] 4.66 62.73
K:125 [TRP] L:58 [G] 4.4 L:49 [C] 97.96
K:143 [SER] L:42 [A] 4.32 33.12
K:156 [GLY] L:45 [U] 4.66 78.37
K:156 [GLY] L:46 [C] 3.71 L:61 [23G] 78.37
K:157 [LYS] L:45 [U] 3.06 sugar:BB 71.93
K:157 [LYS] L:46 [C] 4.25 L:61 [23G] 71.93
K:158 [ILE] L:45 [U] 3.64 70.2
K:158 [ILE] L:46 [C] 4.68 L:61 [23G] 70.2
K:158 [ILE] L:61 [23G] 4.42 L:46 [C] 70.2
K:159 [GLN] L:45 [U] 3.05 base:BB 56.37
K:181 [GLN] L:60 [G] 4.47 L:47 [C] 34.86
K:184 [GLY] L:59 [G] 4.0 L:48 [C] 98.83
K:185 [PRO] L:59 [G] 4.28 L:48 [C] 83.38
K:186 [ALA] L:61 [23G] 4.81 L:46 [C] 87.59
K:187 [LYS] L:60 [G] 4.31 L:47 [C] 98.5
K:188 [SER] L:61 [23G] 3.76 L:46 [C] 84.34

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group76 5H9F_K_L K: Crispr system cascade subunit case, Escherichia coli (strain k12) (genetically engineered) L: crRNA (61-mer), Escherichia coli (genetically engineered) Q46897 CRISPR transcript (pre-crRNA) processing endoribonuclease-related ✘

Interologs

Total number of interologs for this interface: 4

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4C8Y_A_C 5H9F_K_L 0.16 0.56 2.78 0.07 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare
5H9F_K_L 6H9H_B_E 0.27 0.55 3.17 0.07 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare
4ILL_A_R 5H9F_K_L 0.31 0.57 3.39 0.11 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare
2Y8Y_A_B 5H9F_K_L 0.37 0.72 1.89 0.22 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare