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All interfaces > All interologs > Interface groups > group76 > 6H9H_B_E

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Licorice
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Licorice
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Chain
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Hydrophobicity
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Conservation*

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Rim - Core

Contacts -

6H9H_B
6H9H_E
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
B:8 [ARG] E:-3 [C] 3.06 sugar:SC 96.5
B:16 [LYS] E:-1 [C] 3.69 31.91
B:18 [TRP] E:0 [G] 3.33 base/AA stacks 70.14
B:19 [PRO] E:0 [G] 4.96 80.73
B:20 [ASN] E:0 [G] 3.42 base:SC 65.93
B:20 [ASN] E:1 [G] 4.04 65.93
B:23 [ARG] E:22 [23G] 3.37 E:6 [C] 96.5
B:36 [PHE] E:22 [23G] 4.02 E:6 [C] 55.03
B:37 [SER] E:21 [G] 4.03 E:7 [C] 66.31
B:37 [SER] E:22 [23G] 3.95 E:6 [C] 66.31
B:44 [HIS] E:7 [C] 4.31 E:21 [G] 62.14
B:44 [HIS] E:8 [C] 3.63 E:20 [G] 62.14
B:45 [ALA] E:21 [G] 3.25 E:7 [C] 62.14
B:45 [ALA] E:22 [23G] 3.46 E:6 [C] 62.14
B:46 [ILE] E:20 [G] 4.84 E:8 [C] 62.14
B:46 [ILE] E:21 [G] 2.88 E:7 [C] sugar:BB 62.14
B:47 [THR] E:8 [C] 4.92 E:20 [G] 62.14
B:47 [THR] E:9 [C] 3.33 E:19 [G] sugar:SC 62.14
B:47 [THR] E:20 [G] 3.15 E:8 [C] base:SC 62.14
B:47 [THR] E:21 [G] 4.82 E:7 [C] 62.14
B:48 [ARG] E:9 [C] 4.08 E:19 [G] 62.14
B:48 [ARG] E:19 [G] 3.35 E:9 [C] sugar:SC 62.14
B:48 [ARG] E:20 [G] 3.22 E:8 [C] 62.14
B:54 [LYS] E:11 [C] 4.47 E:17 [G] 62.14
B:54 [LYS] E:12 [G] 3.49 E:16 [C] 62.14
B:55 [ARG] E:10 [G] 2.74 E:18 [C] sugar:SC 62.14
B:55 [ARG] E:11 [C] 3.48 E:17 [G] 62.14
B:59 [TYR] E:10 [G] 3.82 E:18 [C] 62.14
B:63 [HIS] E:10 [G] 4.81 E:18 [C] 62.14
B:79 [LEU] E:20 [G] 4.52 E:8 [C] 26.73
B:80 [ALA] E:20 [G] 4.27 E:8 [C] 58.74
B:80 [ALA] E:21 [G] 3.47 E:7 [C] 58.74
B:82 [PRO] E:21 [G] 4.08 E:7 [C] 93.0
B:82 [PRO] E:22 [23G] 3.69 E:6 [C] 93.0
B:88 [GLY] E:-2 [U] 4.91 91.46
B:89 [SER] E:-3 [C] 4.03 65.5
B:89 [SER] E:-2 [U] 3.21 65.5
B:89 [SER] E:-1 [C] 3.65 65.5
B:90 [SER] E:-2 [U] 4.77 43.93
B:90 [SER] E:-1 [C] 2.5 43.93
B:90 [SER] E:0 [G] 4.53 43.93
B:91 [THR] E:-3 [C] 3.78 51.45
B:91 [THR] E:-1 [C] 4.45 51.45
B:92 [TRP] E:-3 [C] 3.54 82.92
B:92 [TRP] E:-2 [U] 3.51 82.92
B:144 [ARG] E:-2 [U] 4.64 34.8
B:146 [PHE] E:-2 [U] 3.36 base/AA stacks 32.31
B:148 [ARG] E:-2 [U] 3.5 62.84
B:148 [ARG] E:-1 [C] 4.76 62.84
B:148 [ARG] E:0 [G] 3.79 base:SC 62.84
B:149 [ASN] E:0 [G] 4.33 75.2
B:149 [ASN] E:1 [G] 2.95 base:SC 75.2
B:152 [MET] E:4 [U] 4.32 63.2
B:153 [LYS] E:4 [U] 2.78 base:BB 94.91
B:153 [LYS] E:5 [U] 4.86 94.91
B:153 [LYS] E:21 [G] 3.11 E:7 [C] base:SC 94.91
B:153 [LYS] E:22 [23G] 2.97 E:6 [C] base:SC 94.91
B:154 [ARG] E:4 [U] 4.25 83.15
B:154 [ARG] E:5 [U] 2.42 base:SC, base:SC 83.15
B:154 [ARG] E:18 [C] 3.21 E:10 [G] base/AA stacks 83.15
B:154 [ARG] E:19 [G] 2.62 E:9 [C] 83.15
B:155 [GLY] E:4 [U] 4.5 30.45
B:156 [LEU] E:3 [G] 2.83 base:BB, base:BB 31.52
B:156 [LEU] E:4 [U] 4.94 31.52
B:157 [THR] E:3 [G] 4.63 76.26
B:158 [LYS] E:2 [U] 2.82 base:SC 85.44
B:158 [LYS] E:3 [G] 2.87 base:SC, base:SC 85.44
B:169 [ARG] E:19 [G] 4.4 E:9 [C] 96.5
B:169 [ARG] E:20 [G] 3.25 E:8 [C] 96.5
B:176 [ARG] E:20 [G] 2.74 E:8 [C] sugar:SC 84.45
B:176 [ARG] E:21 [G] 3.75 E:7 [C] 84.45
B:200 [ARG] E:0 [G] 4.13 96.5
B:200 [ARG] E:1 [G] 2.82 96.5
B:200 [ARG] E:2 [U] 2.95 base:SC 96.5
B:201 [PRO] E:2 [U] 3.45 22.86
B:201 [PRO] E:3 [G] 2.98 22.86
B:202 [ARG] E:1 [G] 2.84 base:SC 55.41
B:202 [ARG] E:2 [U] 3.41 55.41
B:202 [ARG] E:3 [G] 3.14 55.41
B:203 [GLY] E:1 [G] 2.75 sugar:BB 91.46
B:203 [GLY] E:2 [U] 3.02 sugar:BB 91.46
B:203 [GLY] E:3 [G] 3.47 91.46
B:204 [MET] E:1 [G] 3.28 85.92
B:204 [MET] E:2 [U] 4.96 85.92
B:205 [ARG] E:1 [G] 4.39 44.58
B:206 [LEU] E:6 [C] 3.23 E:22 [23G] 76.93
B:206 [LEU] E:22 [23G] 3.27 E:6 [C] 76.93
B:208 [THR] E:6 [C] 4.14 E:22 [23G] 88.79
B:208 [THR] E:22 [23G] 3.44 E:6 [C] 88.79
B:209 [SER] E:22 [23G] 3.89 E:6 [C] 25.58
B:210 [THR] E:6 [C] 4.83 E:22 [23G] 32.72
B:213 [THR] E:6 [C] 3.65 E:22 [23G] 87.79
B:214 [GLU] E:4 [U] 3.35 41.7
B:214 [GLU] E:5 [U] 3.88 41.7
B:214 [GLU] E:6 [C] 4.4 E:22 [23G] 41.7
B:215 [GLN] E:4 [U] 2.89 base:SC 83.36
B:215 [GLN] E:5 [U] 3.24 base/AA stacks 83.36
B:215 [GLN] E:6 [C] 2.83 E:22 [23G] base:SC 83.36
B:215 [GLN] E:22 [23G] 4.36 E:6 [C] 83.36
B:216 [PHE] E:2 [U] 4.4 13.58
B:216 [PHE] E:3 [G] 3.47 13.58
B:216 [PHE] E:4 [U] 2.84 base:BB, sugar:BB 13.58
B:217 [VAL] E:3 [G] 4.63 97.87
B:217 [VAL] E:4 [U] 4.2 97.87
B:218 [GLY] E:3 [G] 3.61 83.5
B:218 [GLY] E:4 [U] 3.74 83.5
B:219 [LEU] E:1 [G] 3.58 91.36
B:221 [ASP] E:-2 [U] 4.78 63.63
B:221 [ASP] E:0 [G] 4.74 63.63
B:237 [GLY] E:21 [G] 3.94 E:7 [C] 91.46
B:238 [ASN] E:20 [G] 3.05 E:8 [C] 99.0
B:238 [ASN] E:21 [G] 2.78 E:7 [C] 99.0
B:238 [ASN] E:22 [23G] 4.46 E:6 [C] 99.0
B:239 [LEU] E:21 [G] 4.31 E:7 [C] 91.36
B:239 [LEU] E:22 [23G] 3.18 E:6 [C] 91.36
B:240 [THR] E:21 [G] 4.89 E:7 [C] 90.07
B:240 [THR] E:22 [23G] 3.48 E:6 [C] 90.07
B:241 [SER] E:21 [G] 4.74 E:7 [C] 90.78
B:241 [SER] E:22 [23G] 3.01 E:6 [C] 90.78
B:242 [ARG] E:22 [23G] 2.74 E:6 [C] 96.5
B:244 [TYR] E:0 [G] 4.33 90.61
B:244 [TYR] E:1 [G] 2.82 base:SC 90.61
B:246 [ARG] E:-3 [C] 4.95 96.5
B:246 [ARG] E:-2 [U] 2.76 96.5
B:248 [ILE] E:-2 [U] 3.54 55.88
B:251 [HIS] E:-3 [C] 2.9 base/AA stacks 66.26

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group76 6H9H_B_E B: Csf5, Aromatoleum aromaticum (strain ebn1) (genetically engineered) E: crRNA, Aromatoleum aromaticum ebn1 (genetically engineered) Q5NWP0 CRISPR transcript (pre-crRNA) processing endoribonuclease-related ✘

Interologs

Total number of interologs for this interface: 2

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4C8Y_A_C 6H9H_B_E 0.33 0.64 2.28 0.13 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare
5H9F_K_L 6H9H_B_E 0.27 0.55 3.17 0.07 CRISPR transcript (pre-crRNA) processing endoribonuclease-related compare