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All interfaces > All interologs > Interface groups > group77 > 4YBB_DI_DA vs 7O7Y_Bs_B5

Interface analysis


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Common contacts -

4YBB_DI
4YBB_DA
7O7Y_Bs
7O7Y_B5
Conserved?
DI:55 [VAL] DA:1084 [A] Bs:56 [GLY] B5:1937 [A] ✔
DI:55 [VAL] DA:1106 [G] Bs:56 [GLY] B5:1959 [U] ✔
DI:55 [VAL] DA:1107 [G] Bs:56 [GLY] B5:1960 [G] ✔
DI:76 [PHE] DA:1108 [U] Bs:83 [ARG] B5:1961 [C] ✔
DI:56 [ARG] DA:1047 [G] Bs:57 [LYS] B5:1900 [G] ✔
DI:56 [ARG] DA:1106 [G] Bs:57 [LYS] B5:1959 [U] ✔
DI:56 [ARG] DA:1107 [G] Bs:57 [LYS] B5:1960 [G] ✔
DI:57 [ASN] DA:1106 [G] Bs:58 [ASN] B5:1959 [U] ✔
DI:57 [ASN] DA:1107 [G] Bs:58 [ASN] B5:1960 [G] ✔
DI:57 [ASN] DA:1108 [U] Bs:58 [ASN] B5:1961 [C] ✔
DI:52 [MET] DA:1084 [A] Bs:53 [VAL] B5:1937 [A] ✔
DI:53 [ARG] DA:1084 [A] Bs:54 [LEU] B5:1937 [A] ✔
DI:33 [VAL] DA:1055 [G] Bs:36 [GLY] B5:1908 [G] ✔
DI:8 [LYS] DA:1046 [A] Bs:10 [LYS] B5:1899 [A] ✔
DI:78 [GLY] DA:1107 [G] Bs:85 [ASN] B5:1960 [G] ✔
DI:46 [ARG] DA:1083 [U] Bs:44 [ARG] B5:1936 [U] ✔
DI:54 [VAL] DA:1084 [A] Bs:55 [MET] B5:1937 [A] ✔
DI:77 [VAL] DA:1107 [G] Bs:84 [GLY] B5:1960 [G] ✔
DI:77 [VAL] DA:1108 [U] Bs:84 [GLY] B5:1961 [C] ✔
DI:58 [THR] DA:1046 [A] Bs:59 [THR] B5:1899 [A] ✔
DI:58 [THR] DA:1047 [G] Bs:59 [THR] B5:1900 [G] ✔
DI:58 [THR] DA:1107 [G] Bs:59 [THR] B5:1960 [G] ✔
DI:62 [ARG] DA:1046 [A] Bs:63 [LYS] B5:1899 [A] ✔
DI:31 [ARG] DA:1054 [A] Bs:35 [VAL] B5:1907 [G] ✔
DI:42 [ARG] DA:1082 [U] Bs:41 [GLN] B5:1934 [G] ✔
DI:38 [MET] DA:1084 [A] Bs:38 [LYS] B5:1937 [A] ❌ 7O7Y_Bs_B5
DI:56 [ARG] DA:1046 [A] Bs:57 [LYS] B5:1899 [A] ❌ 7O7Y_Bs_B5
DI:56 [ARG] DA:1105 [U] Bs:57 [LYS] B5:1958 [C] ❌ 7O7Y_Bs_B5
DI:33 [VAL] DA:1054 [A] Bs:36 [GLY] B5:1907 [G] ❌ 7O7Y_Bs_B5
DI:8 [LYS] DA:1047 [G] Bs:10 [LYS] B5:1900 [G] ❌ 7O7Y_Bs_B5
DI:78 [GLY] DA:1108 [U] Bs:85 [ASN] B5:1961 [C] ❌ 7O7Y_Bs_B5
DI:46 [ARG] DA:1082 [U] Bs:44 [ARG] B5:1934 [G] ❌ 7O7Y_Bs_B5
DI:54 [VAL] DA:1106 [G] Bs:55 [MET] B5:1959 [U] ❌ 7O7Y_Bs_B5
DI:31 [ARG] DA:1106 [G] Bs:35 [VAL] B5:1959 [U] ❌ 7O7Y_Bs_B5
DI:31 [ARG] DA:1107 [G] Bs:35 [VAL] B5:1960 [G] ❌ 7O7Y_Bs_B5
DI:42 [ARG] DA:1083 [U] Bs:41 [GLN] B5:1936 [U] ❌ 7O7Y_Bs_B5
DI:42 [ARG] DA:1084 [A] Bs:41 [GLN] B5:1937 [A] ❌ 7O7Y_Bs_B5
DI:31 [ARG] DA:1055 [G] Bs:35 [VAL] B5:1908 [G] ❌ 4YBB_DI_DA
DI:31 [ARG] DA:1084 [A] Bs:35 [VAL] B5:1937 [A] ❌ 4YBB_DI_DA
DI:33 [VAL] DA:1056 [G] Bs:36 [GLY] B5:1909 [A] ❌ 4YBB_DI_DA
DI:38 [MET] DA:1058 [U] Bs:38 [LYS] B5:1911 [G] ❌ 4YBB_DI_DA
DI:38 [MET] DA:1056 [G] Bs:38 [LYS] B5:1909 [A] ❌ 4YBB_DI_DA
DI:38 [MET] DA:1057 [A] Bs:38 [LYS] B5:1910 [C] ❌ 4YBB_DI_DA
DI:42 [ARG] DA:1058 [U] Bs:41 [GLN] B5:1911 [G] ❌ 4YBB_DI_DA
DI:42 [ARG] DA:1057 [A] Bs:41 [GLN] B5:1910 [C] ❌ 4YBB_DI_DA
DI:46 [ARG] DA:1085 [A] Bs:44 [ARG] B5:1938 [A] ❌ 4YBB_DI_DA
DI:46 [ARG] DA:1084 [A] Bs:44 [ARG] B5:1937 [A] ❌ 4YBB_DI_DA
DI:52 [MET] DA:1083 [U] Bs:53 [VAL] B5:1936 [U] ❌ 4YBB_DI_DA
DI:78 [GLY] DA:1106 [G] Bs:85 [ASN] B5:1959 [U] ❌ 4YBB_DI_DA
DI:8 [LYS] DA:1044 [C] Bs:10 [LYS] B5:1897 [A] ❌ 7O7Y_B5:1897 no longer at interface
DI:8 [LYS] DA:1045 [C] Bs:10 [LYS] B5:1898 [U] ❌ 7O7Y_B5:1898 no longer at interface
DI:3 [LEU] DA:1044 [C] Bs:5 [ASP] B5:1897 [A] ❌ 7O7Y_Bs:5, 7O7Y_B5:1897 no longer at interface
DI:31 [ARG] DA:1053 [C] Bs:35 [VAL] B5:1906 [A] ❌ 7O7Y_B5:1906 no longer at interface
DI:56 [ARG] DA:1048 [A] Bs:57 [LYS] B5:1901 [A] ❌ 4YBB_DA:1048 no longer at interface
DI:4 [ASN] DA:1104 [C] Bs:6 [ARG] B5:1957 [C] ❌ 4YBB_DI:4, 4YBB_DA:1104 no longer at interface
DI:9 [GLN] DA:1046 [A] Bs:11 [SER] B5:1899 [A] ❌ 7O7Y_Bs:11 no longer at interface
DI:12 [VAL] DA:1046 [A] Bs:14 [PHE] B5:1899 [A] ❌ 7O7Y_Bs:14 no longer at interface
DI:3 [LEU] DA:1106 [G] Bs:5 [ASP] B5:1959 [U] ❌ 7O7Y_Bs:5 no longer at interface
DI:5 [LEU] DA:1046 [A] Bs:7 [ALA] B5:1899 [A] ❌ 7O7Y_Bs:7 no longer at interface
DI:80 [THR] DA:1106 [G] Bs:86 [VAL] B5:1959 [U] ❌ 7O7Y_Bs:86 no longer at interface
DI:80 [THR] DA:1107 [G] Bs:86 [VAL] B5:1960 [G] ❌ 7O7Y_Bs:86 no longer at interface
DI:11 [ILE] DA:1084 [A] Bs:13 [TYR] B5:1937 [A] ❌ 4YBB_DI:11 no longer at interface
DI:14 [GLU] DA:1084 [A] Bs:16 [LYS] B5:1937 [A] ❌ 4YBB_DI:14 no longer at interface
DI:30 [SER] DA:1055 [G] Bs:34 [ASN] B5:1908 [G] ❌ 4YBB_DI:30 no longer at interface
DI:30 [SER] DA:1054 [A] Bs:34 [ASN] B5:1907 [G] ❌ 4YBB_DI:30 no longer at interface
DI:37 [LYS] DA:1086 [A] Bs:37 [SER] B5:1939 [G] ❌ 4YBB_DI:37 no longer at interface
DI:37 [LYS] DA:1085 [A] Bs:37 [SER] B5:1938 [A] ❌ 4YBB_DI:37 no longer at interface
DI:37 [LYS] DA:1055 [G] Bs:37 [SER] B5:1908 [G] ❌ 4YBB_DI:37 no longer at interface
DI:37 [LYS] DA:1057 [A] Bs:37 [SER] B5:1910 [C] ❌ 4YBB_DI:37 no longer at interface
DI:37 [LYS] DA:1056 [G] Bs:37 [SER] B5:1909 [A] ❌ 4YBB_DI:37 no longer at interface
DI:41 [LEU] DA:1085 [A] Bs:40 [MET] B5:1938 [A] ❌ 4YBB_DI:41 no longer at interface
DI:41 [LEU] DA:1084 [A] Bs:40 [MET] B5:1937 [A] ❌ 4YBB_DI:41 no longer at interface
DI:50 [VAL] DA:1083 [U] Bs:48 [ARG] B5:1936 [U] ❌ 4YBB_DI:50 no longer at interface
DI:4 [ASN] DA:1105 [U] Bs:6 [ARG] B5:1958 [C] ❌ 4YBB_DI:4 no longer at interface
DI:59 [LEU] DA:1047 [G] Bs:60 [MET] B5:1900 [G] ❌ 4YBB_DI:59 no longer at interface
DI:59 [LEU] DA:1046 [A] Bs:60 [MET] B5:1899 [A] ❌ 4YBB_DI:59 no longer at interface
DI:7 [ASP] DA:1085 [A] Bs:9 [TRP] B5:1938 [A] ❌ 4YBB_DI:7 no longer at interface
DI:7 [ASP] DA:1105 [U] Bs:9 [TRP] B5:1958 [C] ❌ 4YBB_DI:7 no longer at interface
DI:7 [ASP] DA:1106 [G] Bs:9 [TRP] B5:1959 [U] ❌ 4YBB_DI:7 no longer at interface
DI:7 [ASP] DA:1084 [A] Bs:9 [TRP] B5:1937 [A] ❌ 4YBB_DI:7 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L10-like 0.87 5.66 0.15 0.7 0.88 0.63 0.84 0.48 0.41 0.14 0.56


Other pairs involving 4YBB_DI_DA or 7O7Y_Bs_B5

Total number of entries: 5

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4V9F_G_0 4YBB_DI_DA 0.32 0.89 5.57 0.03 Ribosomal protein L10-like compare
4V9F_G_0 7O7Y_Bs_B5 0.76 0.92 3.39 0.3 Ribosomal protein L10-like & Insertion domain in 60S ribosomal protein rpP0 (L10P) compare
4YBB_DI_DA 7N1P_LJ_23 0.50 0.99 3.95 0.26 Ribosomal protein L10-like Bacterial large subunit ribosomal RNA compare
4YBB_DI_DA 7OF0_I_A 0.32 0.94 4.04 0.05 Ribosomal protein L10-like Bacterial large subunit ribosomal RNA compare
4YBB_DI_DA 7O7Y_Bs_B5 0.48 0.87 5.66 0.15 Ribosomal protein L10-like compare