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All interfaces > All interologs > Interface groups > group78 > 6S0Z_1_A vs 7K00_0_a

Interface analysis


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Licorice
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Common contacts -

6S0Z_1
6S0Z_A
7K00_0
7K00_a
Conserved?
1:20 [THR] A:2312 [C] 0:24 [THR] a:2285 [C] ✔
1:20 [THR] A:2313 [A] 0:24 [THR] a:2286 [G] ✔
1:19 [THR] A:2313 [A] 0:23 [THR] a:2286 [G] ✔
1:19 [THR] A:2373 [A] 0:23 [THR] a:2346 [A] ✔
1:2 [ARG] A:2311 [U] 0:6 [ARG] a:2284 [A] ✔
1:2 [ARG] A:2312 [C] 0:6 [ARG] a:2285 [C] ✔
1:2 [ARG] A:2313 [A] 0:6 [ARG] a:2286 [G] ✔
1:42 [TYR] A:2372 [G] 0:46 [HIS] a:2345 [G] ✔
1:42 [TYR] A:2374 [C] 0:46 [HIS] a:2347 [C] ✔
1:42 [TYR] A:2398 [G] 0:46 [HIS] a:2371 [G] ✔
1:42 [TYR] A:2399 [G] 0:46 [HIS] a:2372 [U] ✔
1:17 [TYR] A:2374 [C] 0:21 [TYR] a:2347 [C] ✔
1:17 [TYR] A:2375 [U] 0:21 [TYR] a:2348 [U] ✔
1:37 [PRO] A:688 [A] 0:41 [PRO] a:643 [A] ✔
1:37 [PRO] A:2375 [U] 0:41 [PRO] a:2348 [U] ✔
1:21 [LYS] A:2313 [A] 0:25 [LYS] a:2286 [G] ✔
1:18 [ILE] A:2446 [U] 0:22 [THR] a:2419 [U] ✔
1:35 [TYR] A:2374 [C] 0:39 [PHE] a:2347 [C] ✔
1:35 [TYR] A:2375 [U] 0:39 [PHE] a:2348 [U] ✔
1:35 [TYR] A:2397 [G] 0:39 [PHE] a:2370 [G] ✔
1:35 [TYR] A:2398 [G] 0:39 [PHE] a:2371 [G] ✔
1:32 [MET] A:2313 [A] 0:36 [LEU] a:2286 [G] ✔
1:32 [MET] A:2371 [U] 0:36 [LEU] a:2344 [U] ✔
1:13 [GLY] A:2427 [G] 0:17 [THR] a:2400 [G] ✔
1:40 [ASN] A:2397 [G] 0:44 [ARG] a:2370 [G] ✔
1:40 [ASN] A:2398 [G] 0:44 [ARG] a:2371 [G] ✔
1:26 [ASN] A:2313 [A] 0:30 [LYS] a:2286 [G] ✔
1:26 [ASN] A:2314 [A] 0:30 [LYS] a:2287 [A] ✔
1:22 [ASN] A:2312 [C] 0:26 [ASN] a:2285 [C] ✔
1:4 [ASN] A:2447 [C] 0:8 [LYS] a:2420 [C] ✔
1:16 [ASN] A:2445 [A] 0:20 [PHE] a:2418 [A] ✔
1:33 [LYS] A:2371 [U] 0:37 [LYS] a:2344 [U] ✔
1:33 [LYS] A:2372 [G] 0:37 [LYS] a:2345 [G] ✔
1:30 [ILE] A:2313 [A] 0:34 [LEU] a:2286 [G] ✔
1:41 [LYS] A:2398 [G] 0:45 [GLN] a:2371 [G] ✔
1:34 [LYS] A:2371 [U] 0:38 [LYS] a:2344 [U] ✔
1:34 [LYS] A:2372 [G] 0:38 [LYS] a:2345 [G] ✔
1:34 [LYS] A:2373 [A] 0:38 [LYS] a:2346 [A] ✔
1:34 [LYS] A:2374 [C] 0:38 [LYS] a:2347 [C] ✔
1:25 [ASN] A:2312 [C] 0:29 [THR] a:2285 [C] ✔
1:25 [ASN] A:2313 [A] 0:29 [THR] a:2286 [G] ✔
1:20 [THR] A:2373 [A] 0:24 [THR] a:2346 [A] ❌ 7K00_0_a
1:18 [ILE] A:2447 [C] 0:22 [THR] a:2420 [C] ❌ 7K00_0_a
1:22 [ASN] A:2313 [A] 0:26 [ASN] a:2286 [G] ❌ 7K00_0_a
1:16 [ASN] A:2446 [U] 0:20 [PHE] a:2419 [U] ❌ 6S0Z_1_A
1:22 [ASN] A:2311 [U] 0:26 [ASN] a:2284 [A] ❌ 6S0Z_1_A
1:26 [ASN] A:2312 [C] 0:30 [LYS] a:2285 [C] ❌ 6S0Z_1_A
1:35 [TYR] A:2372 [G] 0:39 [PHE] a:2345 [G] ❌ 6S0Z_1_A
1:40 [ASN] A:688 [A] 0:44 [ARG] a:643 [A] ❌ 6S0Z_1_A
1:41 [LYS] A:2399 [G] 0:45 [GLN] a:2372 [U] ❌ 6S0Z_1_A
1:42 [TYR] A:2371 [U] 0:46 [HIS] a:2344 [U] ❌ 6S0Z_1_A
1:20 [THR] A:2410 [G] 0:24 [THR] a:2383 [G] ❌ 7K00_a:2383 no longer at interface
1:38 [ARG] A:2428 [U] 0:42 [VAL] a:2401 [U] ❌ 7K00_0:42, 7K00_a:2401 no longer at interface
1:14 [ASP] A:2426 [G] 0:18 [GLY] a:2399 [G] ❌ 6S0Z_1:14, 6S0Z_A:2426 no longer at interface
1:16 [ASN] A:2426 [G] 0:20 [PHE] a:2399 [G] ❌ 6S0Z_A:2426 no longer at interface
1:4 [ASN] A:2448 [G] 0:8 [LYS] a:2421 [G] ❌ 6S0Z_A:2448 no longer at interface
1:24 [ARG] A:2311 [U] 0:28 [ARG] a:2284 [A] ❌ 7K00_0:28 no longer at interface
1:24 [ARG] A:2312 [C] 0:28 [ARG] a:2285 [C] ❌ 7K00_0:28 no longer at interface
1:6 [THR] A:2446 [U] 0:10 [LYS] a:2419 [U] ❌ 7K00_0:10 no longer at interface
1:38 [ARG] A:2427 [G] 0:42 [VAL] a:2400 [G] ❌ 7K00_0:42 no longer at interface
1:15 [ARG] A:2445 [A] 0:19 [HIS] a:2418 [A] ❌ 7K00_0:19 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Rubredoxin-related Bacterial large subunit ribosomal RNA 0.97 2.55 0.36 0.83 0.97 0.84 0.89 0.80 0.58 0.25 0.50


Other pairs involving 6S0Z_1_A or 7K00_0_a

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_16_1A 7K00_0_a 0.78 0.96 1.51 0.52 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
4Y4O_16_1A 6S0Z_1_A 0.76 0.96 2.31 0.44 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
6S0Z_1_A 7OF0_1_A 0.35 0.96 3.33 0.11 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
6S0Z_1_A 7RYG_0_A 0.78 0.98 1.58 0.4 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
6S0Z_1_A 7K00_0_a 0.80 0.97 2.55 0.36 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
7K00_0_a 7RYG_0_A 0.93 0.99 2.45 0.8 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
7K00_0_a 7OF0_1_A 0.33 0.93 2.77 0.24 Rubredoxin-related Bacterial large subunit ribosomal RNA compare