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All interfaces > All interologs > Interface groups > group78 > 6S0Z_1_A vs 7OF0_1_A

Interface analysis


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Licorice
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Common contacts -

6S0Z_1
6S0Z_A
7OF0_1
7OF0_A
Conserved?
1:20 [THR] A:2313 [A] 1:33 [LYS] A:2850 [U] ✔
1:2 [ARG] A:2311 [U] 1:15 [ASN] A:2848 [A] ✔
1:2 [ARG] A:2312 [C] 1:15 [ASN] A:2849 [G] ✔
1:18 [ILE] A:2446 [U] 1:31 [ASN] A:2907 [U] ✔
1:18 [ILE] A:2447 [C] 1:31 [ASN] A:2908 [U] ✔
1:35 [TYR] A:2374 [C] 1:46 [TYR] A:2855 [G] ✔
1:6 [THR] A:2446 [U] 1:19 [ARG] A:2907 [U] ✔
1:32 [MET] A:2371 [U] 1:44 [LEU] A:2852 [C] ✔
1:40 [ASN] A:2397 [G] 1:51 [LYS] A:2878 [G] ✔
1:26 [ASN] A:2313 [A] 1:38 [ARG] A:2850 [U] ✔
1:22 [ASN] A:2312 [C] 1:35 [ASN] A:2849 [G] ✔
1:4 [ASN] A:2447 [C] 1:17 [LEU] A:2908 [U] ✔
1:15 [ARG] A:2445 [A] 1:29 [CYS] A:2906 [C] ✔
1:34 [LYS] A:2371 [U] 1:45 [HIS] A:2852 [C] ✔
1:34 [LYS] A:2372 [G] 1:45 [HIS] A:2853 [A] ✔
1:34 [LYS] A:2374 [C] 1:45 [HIS] A:2855 [G] ✔
1:20 [THR] A:2312 [C] 1:33 [LYS] A:2849 [G] ❌ 7OF0_1_A
1:19 [THR] A:2313 [A] 1:32 [THR] A:2850 [U] ❌ 7OF0_1_A
1:2 [ARG] A:2313 [A] 1:15 [ASN] A:2850 [U] ❌ 7OF0_1_A
1:35 [TYR] A:2397 [G] 1:46 [TYR] A:2878 [G] ❌ 7OF0_1_A
1:32 [MET] A:2313 [A] 1:44 [LEU] A:2850 [U] ❌ 7OF0_1_A
1:22 [ASN] A:2313 [A] 1:35 [ASN] A:2850 [U] ❌ 7OF0_1_A
1:16 [ASN] A:2445 [A] 1:30 [PHE] A:2906 [C] ❌ 7OF0_1_A
1:6 [THR] A:2447 [C] 1:19 [ARG] A:2908 [U] ❌ 6S0Z_1_A
1:6 [THR] A:2445 [A] 1:19 [ARG] A:2906 [C] ❌ 6S0Z_1_A
1:16 [ASN] A:2371 [U] 1:30 [PHE] A:2852 [C] ❌ 6S0Z_1_A
1:19 [THR] A:2371 [U] 1:32 [THR] A:2852 [C] ❌ 6S0Z_1_A
1:20 [THR] A:2371 [U] 1:33 [LYS] A:2852 [C] ❌ 6S0Z_1_A
1:20 [THR] A:2311 [U] 1:33 [LYS] A:2848 [A] ❌ 6S0Z_1_A
1:35 [TYR] A:2371 [U] 1:46 [TYR] A:2852 [C] ❌ 6S0Z_1_A
1:35 [TYR] A:2372 [G] 1:46 [TYR] A:2853 [A] ❌ 6S0Z_1_A
1:40 [ASN] A:2372 [G] 1:51 [LYS] A:2853 [A] ❌ 6S0Z_1_A
1:40 [ASN] A:2399 [G] 1:51 [LYS] A:2879 [A] ❌ 6S0Z_1_A
1:20 [THR] A:2373 [A] 1:33 [LYS] A:2854 [U] ❌ 7OF0_A:2854 no longer at interface
1:20 [THR] A:2410 [G] 1:33 [LYS] A:2889 [C] ❌ 7OF0_A:2889 no longer at interface
1:19 [THR] A:2373 [A] 1:32 [THR] A:2854 [U] ❌ 7OF0_A:2854 no longer at interface
1:34 [LYS] A:2373 [A] 1:45 [HIS] A:2854 [U] ❌ 7OF0_A:2854 no longer at interface
1:2 [ARG] A:2310 [C] 1:15 [ASN] A:2847 [C] ❌ 6S0Z_A:2310 no longer at interface
1:4 [ASN] A:2448 [G] 1:17 [LEU] A:2909 [G] ❌ 6S0Z_A:2448 no longer at interface
1:6 [THR] A:2425 [U] 1:19 [ARG] A:2903 [U] ❌ 6S0Z_A:2425 no longer at interface
1:6 [THR] A:2444 [C] 1:19 [ARG] A:2905 [A] ❌ 6S0Z_A:2444 no longer at interface
1:15 [ARG] A:2444 [C] 1:29 [CYS] A:2905 [A] ❌ 6S0Z_A:2444 no longer at interface
1:43 [THR] A:2400 [U] 1:53 [ARG] A:2880 [A] ❌ 6S0Z_1:43, 6S0Z_A:2400 no longer at interface
1:24 [ARG] A:2311 [U] 1:37 [LEU] A:2848 [A] ❌ 7OF0_1:37 no longer at interface
1:24 [ARG] A:2312 [C] 1:37 [LEU] A:2849 [G] ❌ 7OF0_1:37 no longer at interface
1:21 [LYS] A:2313 [A] 1:34 [ARG] A:2850 [U] ❌ 7OF0_1:34 no longer at interface
1:30 [ILE] A:2313 [A] 1:42 [THR] A:2850 [U] ❌ 7OF0_1:42 no longer at interface
1:31 [GLU] A:2371 [U] 1:43 [LEU] A:2852 [C] ❌ 6S0Z_1:31 no longer at interface
1:43 [THR] A:2372 [G] 1:53 [ARG] A:2853 [A] ❌ 6S0Z_1:43 no longer at interface
1:43 [THR] A:2399 [G] 1:53 [ARG] A:2879 [A] ❌ 6S0Z_1:43 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Rubredoxin-related Bacterial large subunit ribosomal RNA 0.96 3.33 0.11 0.78 0.96 0.67 0.61 0.35 0.02 0.18 0.50


Other pairs involving 6S0Z_1_A or 7OF0_1_A

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_16_1A 6S0Z_1_A 0.76 0.96 2.31 0.44 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
6S0Z_1_A 7K00_0_a 0.80 0.97 2.55 0.36 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
7K00_0_a 7OF0_1_A 0.33 0.93 2.77 0.24 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
6S0Z_1_A 7OF0_1_A 0.35 0.96 3.33 0.11 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
4Y4O_16_1A 7OF0_1_A 0.47 0.96 2.56 0.22 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
6S0Z_1_A 7RYG_0_A 0.78 0.98 1.58 0.4 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
7OF0_1_A 7RYG_0_A 0.55 0.93 3.29 0.19 Rubredoxin-related Bacterial large subunit ribosomal RNA compare