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All interfaces > All interologs > Interface groups > group78 > 6S0Z_1_A vs 7RYG_0_A

Interface analysis


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Common contacts -

6S0Z_1
6S0Z_A
7RYG_0
7RYG_A
Conserved?
1:20 [THR] A:2312 [C] 0:20 [THR] A:2281 [C] ✔
1:20 [THR] A:2313 [A] 0:20 [THR] A:2282 [G] ✔
1:19 [THR] A:2313 [A] 0:19 [THR] A:2282 [G] ✔
1:19 [THR] A:2373 [A] 0:19 [THR] A:2342 [A] ✔
1:2 [ARG] A:2311 [U] 0:2 [ARG] A:2280 [A] ✔
1:2 [ARG] A:2312 [C] 0:2 [ARG] A:2281 [C] ✔
1:2 [ARG] A:2313 [A] 0:2 [ARG] A:2282 [G] ✔
1:42 [TYR] A:2372 [G] 0:42 [HIS] A:2341 [A] ✔
1:42 [TYR] A:2398 [G] 0:42 [HIS] A:2367 [G] ✔
1:42 [TYR] A:2399 [G] 0:42 [HIS] A:2368 [U] ✔
1:17 [TYR] A:2374 [C] 0:17 [TYR] A:2343 [C] ✔
1:17 [TYR] A:2375 [U] 0:17 [TYR] A:2344 [U] ✔
1:37 [PRO] A:2375 [U] 0:37 [PRO] A:2344 [U] ✔
1:21 [LYS] A:2313 [A] 0:21 [LYS] A:2282 [G] ✔
1:18 [ILE] A:2446 [U] 0:18 [THR] A:2415 [U] ✔
1:18 [ILE] A:2447 [C] 0:18 [THR] A:2416 [C] ✔
1:35 [TYR] A:2374 [C] 0:35 [PHE] A:2343 [C] ✔
1:35 [TYR] A:2375 [U] 0:35 [PHE] A:2344 [U] ✔
1:35 [TYR] A:2397 [G] 0:35 [PHE] A:2366 [G] ✔
1:35 [TYR] A:2398 [G] 0:35 [PHE] A:2367 [G] ✔
1:6 [THR] A:2446 [U] 0:6 [ARG] A:2415 [U] ✔
1:32 [MET] A:2313 [A] 0:32 [ILE] A:2282 [G] ✔
1:32 [MET] A:2371 [U] 0:32 [ILE] A:2340 [U] ✔
1:13 [GLY] A:2427 [G] 0:14 [GLY] A:2396 [G] ✔
1:40 [ASN] A:2397 [G] 0:40 [ARG] A:2366 [G] ✔
1:40 [ASN] A:2398 [G] 0:40 [ARG] A:2367 [G] ✔
1:26 [ASN] A:2313 [A] 0:26 [MET] A:2282 [G] ✔
1:22 [ASN] A:2312 [C] 0:22 [ASN] A:2281 [C] ✔
1:22 [ASN] A:2313 [A] 0:22 [ASN] A:2282 [G] ✔
1:4 [ASN] A:2447 [C] 0:4 [LYS] A:2416 [C] ✔
1:38 [ARG] A:2427 [G] 0:38 [LYS] A:2396 [G] ✔
1:33 [LYS] A:2371 [U] 0:33 [LYS] A:2340 [U] ✔
1:33 [LYS] A:2372 [G] 0:33 [LYS] A:2341 [A] ✔
1:15 [ARG] A:2445 [A] 0:16 [PHE] A:2414 [A] ✔
1:30 [ILE] A:2313 [A] 0:30 [MET] A:2282 [G] ✔
1:41 [LYS] A:2398 [G] 0:41 [GLN] A:2367 [G] ✔
1:34 [LYS] A:2371 [U] 0:34 [LYS] A:2340 [U] ✔
1:34 [LYS] A:2372 [G] 0:34 [LYS] A:2341 [A] ✔
1:34 [LYS] A:2373 [A] 0:34 [LYS] A:2342 [A] ✔
1:34 [LYS] A:2374 [C] 0:34 [LYS] A:2343 [C] ✔
1:25 [ASN] A:2312 [C] 0:25 [THR] A:2281 [C] ✔
1:25 [ASN] A:2313 [A] 0:25 [THR] A:2282 [G] ✔
1:20 [THR] A:2373 [A] 0:20 [THR] A:2342 [A] ❌ 7RYG_0_A
1:42 [TYR] A:2374 [C] 0:42 [HIS] A:2343 [C] ❌ 7RYG_0_A
1:37 [PRO] A:688 [A] 0:37 [PRO] A:641 [A] ❌ 7RYG_0_A
1:15 [ARG] A:2446 [U] 0:16 [PHE] A:2415 [U] ❌ 6S0Z_1_A
1:22 [ASN] A:2311 [U] 0:22 [ASN] A:2280 [A] ❌ 6S0Z_1_A
1:35 [TYR] A:2372 [G] 0:35 [PHE] A:2341 [A] ❌ 6S0Z_1_A
1:40 [ASN] A:688 [A] 0:40 [ARG] A:641 [A] ❌ 6S0Z_1_A
1:6 [THR] A:2445 [A] 0:6 [ARG] A:2414 [A] ❌ 6S0Z_1_A
1:20 [THR] A:2410 [G] 0:20 [THR] A:2379 [G] ❌ 7RYG_A:2379 no longer at interface
1:26 [ASN] A:2314 [A] 0:26 [MET] A:2283 [A] ❌ 7RYG_A:2283 no longer at interface
1:38 [ARG] A:2428 [U] 0:38 [LYS] A:2397 [U] ❌ 7RYG_A:2397 no longer at interface
1:13 [GLY] A:2426 [G] 0:14 [GLY] A:2395 [G] ❌ 6S0Z_A:2426 no longer at interface
1:15 [ARG] A:2426 [G] 0:16 [PHE] A:2395 [G] ❌ 6S0Z_A:2426 no longer at interface
1:4 [ASN] A:2448 [G] 0:4 [LYS] A:2417 [G] ❌ 6S0Z_A:2448 no longer at interface
1:6 [THR] A:2425 [U] 0:6 [ARG] A:2394 [U] ❌ 6S0Z_A:2425 no longer at interface
1:6 [THR] A:2426 [G] 0:6 [ARG] A:2395 [G] ❌ 6S0Z_A:2426 no longer at interface
1:24 [ARG] A:2311 [U] 0:24 [ARG] A:2280 [A] ❌ 7RYG_0:24 no longer at interface
1:24 [ARG] A:2312 [C] 0:24 [ARG] A:2281 [C] ❌ 7RYG_0:24 no longer at interface
1:12 [CYS] A:2427 [G] 0:13 [THR] A:2396 [G] ❌ 6S0Z_1:12 no longer at interface
1:14 [ASP] A:2375 [U] 0:15 [TYR] A:2344 [U] ❌ 6S0Z_1:14 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Rubredoxin-related Bacterial large subunit ribosomal RNA 0.98 1.58 0.40 0.85 0.98 0.92 0.84 0.78 0.55 0.21 0.60


Other pairs involving 6S0Z_1_A or 7RYG_0_A

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_16_1A 7RYG_0_A 0.80 0.96 2.89 0.39 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
4Y4O_16_1A 6S0Z_1_A 0.76 0.96 2.31 0.44 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
6S0Z_1_A 7OF0_1_A 0.35 0.96 3.33 0.11 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
6S0Z_1_A 7RYG_0_A 0.78 0.98 1.58 0.4 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
6S0Z_1_A 7K00_0_a 0.80 0.97 2.55 0.36 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
7K00_0_a 7RYG_0_A 0.93 0.99 2.45 0.8 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
7OF0_1_A 7RYG_0_A 0.55 0.93 3.29 0.19 Rubredoxin-related Bacterial large subunit ribosomal RNA compare