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All interfaces > All interologs > Interface groups > group78 > 7K00_0_a vs 7OF0_1_A

Interface analysis


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Licorice
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Licorice
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Common contacts -

7K00_0
7K00_a
7OF0_1
7OF0_A
Conserved?
0:18 [GLY] a:2399 [G] 1:27 [GLY] A:2904 [A] ✔
0:24 [THR] a:2286 [G] 1:33 [LYS] A:2850 [U] ✔
0:39 [PHE] a:2345 [G] 1:46 [TYR] A:2852 [C] ✔
0:39 [PHE] a:2348 [U] 1:46 [TYR] A:2855 [G] ✔
0:37 [LYS] a:2345 [G] 1:44 [LEU] A:2852 [C] ✔
0:8 [LYS] a:2420 [C] 1:17 [LEU] A:2908 [U] ✔
0:8 [LYS] a:2421 [G] 1:17 [LEU] A:2909 [G] ✔
0:54 [ILE] a:2420 [C] 1:62 [ILE] A:2908 [U] ✔
0:22 [THR] a:2419 [U] 1:31 [ASN] A:2907 [U] ✔
0:26 [ASN] a:2285 [C] 1:35 [ASN] A:2849 [G] ✔
0:46 [HIS] a:2371 [G] 1:53 [ARG] A:2879 [A] ✔
0:46 [HIS] a:2372 [U] 1:53 [ARG] A:2880 [A] ✔
0:6 [ARG] a:2284 [A] 1:15 [ASN] A:2848 [A] ✔
0:6 [ARG] a:2285 [C] 1:15 [ASN] A:2849 [G] ✔
0:38 [LYS] a:2345 [G] 1:45 [HIS] A:2852 [C] ✔
0:38 [LYS] a:2346 [A] 1:45 [HIS] A:2853 [A] ✔
0:44 [ARG] a:2370 [G] 1:51 [LYS] A:2878 [G] ✔
0:44 [ARG] a:2371 [G] 1:51 [LYS] A:2879 [A] ✔
0:24 [THR] a:2285 [C] 1:33 [LYS] A:2849 [G] ❌ 7OF0_1_A
0:39 [PHE] a:2370 [G] 1:46 [TYR] A:2878 [G] ❌ 7OF0_1_A
0:39 [PHE] a:2371 [G] 1:46 [TYR] A:2879 [A] ❌ 7OF0_1_A
0:36 [LEU] a:2286 [G] 1:43 [LEU] A:2850 [U] ❌ 7OF0_1_A
0:20 [PHE] a:2399 [G] 1:29 [CYS] A:2904 [A] ❌ 7OF0_1_A
0:20 [PHE] a:2419 [U] 1:29 [CYS] A:2907 [U] ❌ 7OF0_1_A
0:54 [ILE] a:2419 [U] 1:62 [ILE] A:2907 [U] ❌ 7OF0_1_A
0:23 [THR] a:2286 [G] 1:32 [THR] A:2850 [U] ❌ 7OF0_1_A
0:23 [THR] a:2346 [A] 1:32 [THR] A:2853 [A] ❌ 7OF0_1_A
0:26 [ASN] a:2284 [A] 1:35 [ASN] A:2848 [A] ❌ 7OF0_1_A
0:46 [HIS] a:2345 [G] 1:53 [ARG] A:2852 [C] ❌ 7OF0_1_A
0:6 [ARG] a:2286 [G] 1:15 [ASN] A:2850 [U] ❌ 7OF0_1_A
0:21 [TYR] a:2348 [U] 1:30 [PHE] A:2855 [G] ❌ 7OF0_1_A
0:6 [ARG] a:2283 [C] 1:15 [ASN] A:2847 [C] ❌ 7K00_0_a
0:18 [GLY] a:2400 [G] 1:27 [GLY] A:2905 [A] ❌ 7K00_0_a
0:20 [PHE] a:2400 [G] 1:29 [CYS] A:2905 [A] ❌ 7K00_0_a
0:21 [TYR] a:2345 [G] 1:30 [PHE] A:2852 [C] ❌ 7K00_0_a
0:22 [THR] a:2420 [C] 1:31 [ASN] A:2908 [U] ❌ 7K00_0_a
0:23 [THR] a:2345 [G] 1:32 [THR] A:2852 [C] ❌ 7K00_0_a
0:24 [THR] a:2345 [G] 1:33 [LYS] A:2852 [C] ❌ 7K00_0_a
0:24 [THR] a:2284 [A] 1:33 [LYS] A:2848 [A] ❌ 7K00_0_a
0:36 [LEU] a:2345 [G] 1:43 [LEU] A:2852 [C] ❌ 7K00_0_a
0:38 [LYS] a:2348 [U] 1:45 [HIS] A:2855 [G] ❌ 7K00_0_a
0:39 [PHE] a:2346 [A] 1:46 [TYR] A:2853 [A] ❌ 7K00_0_a
0:44 [ARG] a:2346 [A] 1:51 [LYS] A:2853 [A] ❌ 7K00_0_a
0:46 [HIS] a:2346 [A] 1:53 [ARG] A:2853 [A] ❌ 7K00_0_a
0:39 [PHE] a:2347 [C] 1:46 [TYR] A:2854 [U] ❌ 7OF0_A:2854 no longer at interface
0:36 [LEU] a:2344 [U] 1:43 [LEU] A:2851 [A] ❌ 7OF0_A:2851 no longer at interface
0:37 [LYS] a:2344 [U] 1:44 [LEU] A:2851 [A] ❌ 7OF0_A:2851 no longer at interface
0:46 [HIS] a:2344 [U] 1:53 [ARG] A:2851 [A] ❌ 7OF0_A:2851 no longer at interface
0:46 [HIS] a:2347 [C] 1:53 [ARG] A:2854 [U] ❌ 7OF0_A:2854 no longer at interface
0:38 [LYS] a:2344 [U] 1:45 [HIS] A:2851 [A] ❌ 7OF0_A:2851 no longer at interface
0:38 [LYS] a:2347 [C] 1:45 [HIS] A:2854 [U] ❌ 7OF0_A:2854 no longer at interface
0:21 [TYR] a:2347 [C] 1:30 [PHE] A:2854 [U] ❌ 7OF0_A:2854 no longer at interface
0:10 [LYS] a:2398 [U] 1:19 [ARG] A:2903 [U] ❌ 7K00_0:10, 7K00_a:2398 no longer at interface
0:10 [LYS] a:2417 [C] 1:19 [ARG] A:2906 [C] ❌ 7K00_0:10, 7K00_a:2417 no longer at interface
0:18 [GLY] a:2417 [C] 1:27 [GLY] A:2906 [C] ❌ 7K00_a:2417 no longer at interface
0:20 [PHE] a:2417 [C] 1:29 [CYS] A:2906 [C] ❌ 7K00_a:2417 no longer at interface
0:34 [LEU] a:2286 [G] 1:41 [LEU] A:2850 [U] ❌ 7OF0_1:41 no longer at interface
0:5 [ILE] a:2283 [C] 1:14 [LYS] A:2847 [C] ❌ 7OF0_1:14 no longer at interface
0:5 [ILE] a:2284 [A] 1:14 [LYS] A:2848 [A] ❌ 7OF0_1:14 no longer at interface
0:17 [THR] a:2400 [G] 1:26 [THR] A:2905 [A] ❌ 7OF0_1:26 no longer at interface
0:45 [GLN] a:2371 [G] 1:52 [GLN] A:2879 [A] ❌ 7OF0_1:52 no longer at interface
0:45 [GLN] a:2372 [U] 1:52 [GLN] A:2880 [A] ❌ 7OF0_1:52 no longer at interface
0:41 [PRO] a:2348 [U] 1:48 [PRO] A:2855 [G] ❌ 7OF0_1:48 no longer at interface
0:25 [LYS] a:2286 [G] 1:34 [ARG] A:2850 [U] ❌ 7OF0_1:34 no longer at interface
0:10 [LYS] a:2419 [U] 1:19 [ARG] A:2907 [U] ❌ 7K00_0:10 no longer at interface
0:10 [LYS] a:2420 [C] 1:19 [ARG] A:2908 [U] ❌ 7K00_0:10 no longer at interface
0:10 [LYS] a:2400 [G] 1:19 [ARG] A:2905 [A] ❌ 7K00_0:10 no longer at interface
0:31 [PRO] a:2286 [G] 1:38 [ARG] A:2850 [U] ❌ 7K00_0:31 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Rubredoxin-related Bacterial large subunit ribosomal RNA 0.93 2.77 0.24 0.81 0.93 0.76 0.83 0.33 0.15 0.05 0.48


Other pairs involving 7K00_0_a or 7OF0_1_A

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0Z_1_A 7K00_0_a 0.80 0.97 2.55 0.36 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
4Y4O_16_1A 7K00_0_a 0.78 0.96 1.51 0.52 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
7K00_0_a 7OF0_1_A 0.33 0.93 2.77 0.24 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
6S0Z_1_A 7OF0_1_A 0.35 0.96 3.33 0.11 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
4Y4O_16_1A 7OF0_1_A 0.47 0.96 2.56 0.22 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
7K00_0_a 7RYG_0_A 0.93 0.99 2.45 0.8 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
7OF0_1_A 7RYG_0_A 0.55 0.93 3.29 0.19 Rubredoxin-related Bacterial large subunit ribosomal RNA compare