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All interfaces > All interologs > Interface groups > group78 > 7OF0_1_A vs 7RYG_0_A

Interface analysis


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Licorice
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Common contacts -

7OF0_1
7OF0_A
7RYG_0
7RYG_A
Conserved?
1:19 [ARG] A:2903 [U] 0:6 [ARG] A:2394 [U] ✔
1:19 [ARG] A:2907 [U] 0:6 [ARG] A:2415 [U] ✔
1:15 [ASN] A:2848 [A] 0:2 [ARG] A:2280 [A] ✔
1:15 [ASN] A:2849 [G] 0:2 [ARG] A:2281 [C] ✔
1:17 [LEU] A:2908 [U] 0:4 [LYS] A:2416 [C] ✔
1:17 [LEU] A:2909 [G] 0:4 [LYS] A:2417 [G] ✔
1:46 [TYR] A:2853 [A] 0:35 [PHE] A:2341 [A] ✔
1:46 [TYR] A:2855 [G] 0:35 [PHE] A:2344 [U] ✔
1:53 [ARG] A:2853 [A] 0:42 [HIS] A:2341 [A] ✔
1:53 [ARG] A:2879 [A] 0:42 [HIS] A:2367 [G] ✔
1:53 [ARG] A:2880 [A] 0:42 [HIS] A:2368 [U] ✔
1:62 [ILE] A:2908 [U] 0:51 [LYS] A:2416 [C] ✔
1:45 [HIS] A:2852 [C] 0:34 [LYS] A:2340 [U] ✔
1:45 [HIS] A:2853 [A] 0:34 [LYS] A:2341 [A] ✔
1:44 [LEU] A:2852 [C] 0:33 [LYS] A:2340 [U] ✔
1:33 [LYS] A:2850 [U] 0:20 [THR] A:2282 [G] ✔
1:35 [ASN] A:2849 [G] 0:22 [ASN] A:2281 [C] ✔
1:51 [LYS] A:2878 [G] 0:40 [ARG] A:2366 [G] ✔
1:51 [LYS] A:2879 [A] 0:40 [ARG] A:2367 [G] ✔
1:31 [ASN] A:2907 [U] 0:18 [THR] A:2415 [U] ✔
1:31 [ASN] A:2908 [U] 0:18 [THR] A:2416 [C] ✔
1:43 [LEU] A:2852 [C] 0:32 [ILE] A:2340 [U] ✔
1:19 [ARG] A:2908 [U] 0:6 [ARG] A:2416 [C] ❌ 7RYG_0_A
1:46 [TYR] A:2852 [C] 0:35 [PHE] A:2340 [U] ❌ 7RYG_0_A
1:32 [THR] A:2852 [C] 0:19 [THR] A:2340 [U] ❌ 7RYG_0_A
1:30 [PHE] A:2852 [C] 0:17 [TYR] A:2340 [U] ❌ 7RYG_0_A
1:45 [HIS] A:2855 [G] 0:34 [LYS] A:2344 [U] ❌ 7RYG_0_A
1:33 [LYS] A:2848 [A] 0:20 [THR] A:2280 [A] ❌ 7RYG_0_A
1:33 [LYS] A:2852 [C] 0:20 [THR] A:2340 [U] ❌ 7RYG_0_A
1:51 [LYS] A:2853 [A] 0:40 [ARG] A:2341 [A] ❌ 7RYG_0_A
1:29 [CYS] A:2907 [U] 0:16 [PHE] A:2415 [U] ❌ 7OF0_1_A
1:30 [PHE] A:2855 [G] 0:17 [TYR] A:2344 [U] ❌ 7OF0_1_A
1:32 [THR] A:2850 [U] 0:19 [THR] A:2282 [G] ❌ 7OF0_1_A
1:15 [ASN] A:2850 [U] 0:2 [ARG] A:2282 [G] ❌ 7OF0_1_A
1:33 [LYS] A:2849 [G] 0:20 [THR] A:2281 [C] ❌ 7OF0_1_A
1:35 [ASN] A:2850 [U] 0:22 [ASN] A:2282 [G] ❌ 7OF0_1_A
1:35 [ASN] A:2848 [A] 0:22 [ASN] A:2280 [A] ❌ 7OF0_1_A
1:43 [LEU] A:2850 [U] 0:32 [ILE] A:2282 [G] ❌ 7OF0_1_A
1:44 [LEU] A:2853 [A] 0:33 [LYS] A:2341 [A] ❌ 7OF0_1_A
1:46 [TYR] A:2878 [G] 0:35 [PHE] A:2366 [G] ❌ 7OF0_1_A
1:46 [TYR] A:2879 [A] 0:35 [PHE] A:2367 [G] ❌ 7OF0_1_A
1:62 [ILE] A:2903 [U] 0:51 [LYS] A:2394 [U] ❌ 7OF0_1_A
1:29 [CYS] A:2905 [A] 0:16 [PHE] A:2412 [C] ❌ 7RYG_A:2412 no longer at interface
1:29 [CYS] A:2906 [C] 0:16 [PHE] A:2413 [C] ❌ 7RYG_A:2413 no longer at interface
1:19 [ARG] A:2905 [A] 0:6 [ARG] A:2412 [C] ❌ 7RYG_A:2412 no longer at interface
1:19 [ARG] A:2906 [C] 0:6 [ARG] A:2413 [C] ❌ 7RYG_A:2413 no longer at interface
1:15 [ASN] A:2847 [C] 0:2 [ARG] A:2279 [U] ❌ 7RYG_A:2279 no longer at interface
1:27 [GLY] A:2904 [A] 0:14 [GLY] A:2409 [G] ❌ 7RYG_A:2409 no longer at interface
1:27 [GLY] A:2905 [A] 0:14 [GLY] A:2412 [C] ❌ 7RYG_A:2412 no longer at interface
1:27 [GLY] A:2906 [C] 0:14 [GLY] A:2413 [C] ❌ 7RYG_A:2413 no longer at interface
1:32 [THR] A:2854 [U] 0:19 [THR] A:2342 [A] ❌ 7OF0_A:2854 no longer at interface
1:45 [HIS] A:2854 [U] 0:34 [LYS] A:2342 [A] ❌ 7OF0_A:2854 no longer at interface
1:62 [ILE] A:2902 [A] 0:51 [LYS] A:2393 [G] ❌ 7OF0_A:2902 no longer at interface
1:38 [ARG] A:2850 [U] 0:27 [PRO] A:2282 [G] ❌ 7RYG_0:27 no longer at interface
1:14 [LYS] A:2848 [A] 0:1 [MET] A:2280 [A] ❌ 7OF0_1:14 no longer at interface
1:28 [PHE] A:2855 [G] 0:15 [TYR] A:2344 [U] ❌ 7OF0_1:28 no longer at interface
1:34 [ARG] A:2850 [U] 0:21 [LYS] A:2282 [G] ❌ 7OF0_1:34 no longer at interface
1:41 [LEU] A:2850 [U] 0:30 [MET] A:2282 [G] ❌ 7OF0_1:41 no longer at interface
1:48 [PRO] A:2855 [G] 0:37 [PRO] A:2344 [U] ❌ 7OF0_1:48 no longer at interface
1:52 [GLN] A:2879 [A] 0:41 [GLN] A:2367 [G] ❌ 7OF0_1:52 no longer at interface
1:61 [LYS] A:2907 [U] 0:50 [ILE] A:2415 [U] ❌ 7OF0_1:61 no longer at interface
1:61 [LYS] A:2908 [U] 0:50 [ILE] A:2416 [C] ❌ 7OF0_1:61 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Rubredoxin-related Bacterial large subunit ribosomal RNA 0.93 3.29 0.19 0.81 0.93 0.81 0.72 0.55 0.22 0.05 0.50


Other pairs involving 7OF0_1_A or 7RYG_0_A

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
7K00_0_a 7RYG_0_A 0.93 0.99 2.45 0.8 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
7K00_0_a 7OF0_1_A 0.33 0.93 2.77 0.24 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
6S0Z_1_A 7OF0_1_A 0.35 0.96 3.33 0.11 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
6S0Z_1_A 7RYG_0_A 0.78 0.98 1.58 0.4 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
7OF0_1_A 7RYG_0_A 0.55 0.93 3.29 0.19 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
4Y4O_16_1A 7OF0_1_A 0.47 0.96 2.56 0.22 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
4Y4O_16_1A 7RYG_0_A 0.80 0.96 2.89 0.39 Rubredoxin-related Bacterial large subunit ribosomal RNA compare