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All interfaces > All interologs > Interface groups > group81 > 4Y4O_19_1A vs 7RYG_3_A

Interface analysis


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Common contacts -

4Y4O_19
4Y4O_1A
7RYG_3
7RYG_A
Conserved?
19:19 [ARG] 1A:2767 [U] 3:19 [ARG] A:2750 [U] ✔
19:19 [ARG] 1A:2768 [C] 3:19 [ARG] A:2751 [C] ✔
19:19 [ARG] 1A:2769 [U] 3:19 [ARG] A:2752 [U] ✔
19:19 [ARG] 1A:2770 [A] 3:19 [ARG] A:2753 [A] ✔
19:20 [HIS] 1A:2769 [U] 3:20 [ASN] A:2752 [U] ✔
19:20 [HIS] 1A:2770 [A] 3:20 [ASN] A:2753 [A] ✔
19:24 [TYR] 1A:2755 [C] 3:24 [ARG] A:2738 [C] ✔
19:3 [VAL] 1A:2550 [C] 3:3 [VAL] A:2534 [C] ✔
19:3 [VAL] 1A:2551 [C] 3:3 [VAL] A:2535 [C] ✔
19:4 [ARG] 1A:2478 [C] 3:4 [GLN] A:2462 [C] ✔
19:26 [ILE] 1A:2767 [U] 3:26 [ILE] A:2750 [U] ✔
19:6 [SER] 1A:1076 [G] 3:5 [ALA] A:1027 [C] ✔
19:6 [SER] 1A:1077 [G] 3:5 [ALA] A:1028 [G] ✔
19:6 [SER] 1A:2477 [C] 3:5 [ALA] A:2461 [C] ✔
19:6 [SER] 1A:2478 [C] 3:5 [ALA] A:2462 [C] ✔
19:36 [GLN] 1A:1170 [C] 3:37 [GLN] A:1121 [G] ✔
19:17 [ILE] 1A:2767 [U] 3:17 [ILE] A:2750 [U] ✔
19:17 [ILE] 1A:2769 [U] 3:17 [ILE] A:2752 [U] ✔
19:8 [LYS] 1A:1077 [G] 3:7 [VAL] A:1028 [G] ✔
19:8 [LYS] 1A:1078 [A] 3:7 [VAL] A:1029 [A] ✔
19:2 [LYS] 1A:2489 [C] 3:2 [LYS] A:2473 [U] ✔
19:15 [LYS] 1A:2766 [A] 3:15 [LYS] A:2749 [A] ✔
19:15 [LYS] 1A:2767 [U] 3:15 [LYS] A:2750 [U] ✔
19:9 [ARG] 1A:1078 [A] 3:8 [LYS] A:1029 [A] ✔
19:35 [ARG] 1A:2551 [C] 3:36 [ARG] A:2535 [C] ✔
19:35 [ARG] 1A:2552 [C] 3:36 [ARG] A:2536 [C] ✔
19:35 [ARG] 1A:2754 [A] 3:36 [ARG] A:2737 [A] ✔
19:35 [ARG] 1A:2755 [C] 3:36 [ARG] A:2738 [C] ✔
19:18 [ARG] 1A:1080 [G] 3:18 [ARG] A:1031 [G] ✔
19:18 [ARG] 1A:1168 [G] 3:18 [ARG] A:1119 [G] ✔
19:18 [ARG] 1A:1169 [C] 3:18 [ARG] A:1120 [C] ✔
19:18 [ARG] 1A:2769 [U] 3:18 [ARG] A:2752 [U] ✔
19:18 [ARG] 1A:2770 [A] 3:18 [ARG] A:2753 [A] ✔
19:7 [VAL] 1A:1077 [G] 3:6 [SER] A:1028 [G] ✔
19:30 [PRO] 1A:2539 [C] 3:32 [ARG] A:2523 [C] ✔
19:30 [PRO] 1A:2540 [U] 3:32 [ARG] A:2524 [U] ✔
19:37 [GLY] 1A:1170 [C] 3:38 [GLY] A:1121 [G] ✔
19:21 [GLY] 1A:1169 [C] 3:21 [GLY] A:1120 [C] ✔
19:21 [GLY] 1A:1170 [C] 3:21 [GLY] A:1121 [G] ✔
19:21 [GLY] 1A:2770 [A] 3:21 [GLY] A:2753 [A] ✔
19:1 [MET] 1A:2538 [G] 3:1 [MET] A:2522 [G] ✔
19:1 [MET] 1A:2539 [C] 3:1 [MET] A:2523 [C] ✔
19:1 [MET] 1A:2550 [C] 3:1 [MET] A:2534 [C] ✔
19:1 [MET] 1A:2755 [C] 3:1 [MET] A:2738 [C] ✔
19:1 [MET] 1A:2756 [C] 3:1 [MET] A:2739 [C] ✔
19:33 [LYS] 1A:2538 [G] 3:34 [LYS] A:2522 [G] ✔
19:33 [LYS] 1A:2539 [C] 3:34 [LYS] A:2523 [C] ✔
19:33 [LYS] 1A:2755 [C] 3:34 [LYS] A:2738 [C] ✔
19:33 [LYS] 1A:2756 [C] 3:34 [LYS] A:2739 [C] ✔
19:23 [VAL] 1A:1078 [A] 3:23 [ILE] A:1029 [A] ✔
19:16 [VAL] 1A:1078 [A] 3:16 [VAL] A:1029 [A] ✔
19:16 [VAL] 1A:1079 [U] 3:16 [VAL] A:1030 [U] ✔
19:20 [HIS] 1A:2768 [C] 3:20 [ASN] A:2751 [C] ❌ 7RYG_3_A
19:3 [VAL] 1A:2477 [C] 3:3 [VAL] A:2461 [C] ❌ 7RYG_3_A
19:4 [ARG] 1A:2477 [C] 3:4 [GLN] A:2461 [C] ❌ 7RYG_3_A
19:4 [ARG] 1A:2489 [C] 3:4 [GLN] A:2473 [U] ❌ 7RYG_3_A
19:26 [ILE] 1A:2768 [C] 3:26 [ILE] A:2751 [C] ❌ 7RYG_3_A
19:6 [SER] 1A:2479 [C] 3:5 [ALA] A:2463 [C] ❌ 7RYG_3_A
19:36 [GLN] 1A:1076 [G] 3:37 [GLN] A:1027 [C] ❌ 7RYG_3_A
19:36 [GLN] 1A:1077 [G] 3:37 [GLN] A:1028 [G] ❌ 7RYG_3_A
19:36 [GLN] 1A:1169 [C] 3:37 [GLN] A:1120 [C] ❌ 7RYG_3_A
19:8 [LYS] 1A:2479 [C] 3:7 [VAL] A:2463 [C] ❌ 7RYG_3_A
19:2 [LYS] 1A:2490 [A] 3:2 [LYS] A:2474 [A] ❌ 7RYG_3_A
19:9 [ARG] 1A:1079 [U] 3:8 [LYS] A:1030 [U] ❌ 7RYG_3_A
19:7 [VAL] 1A:1078 [A] 3:6 [SER] A:1029 [A] ❌ 7RYG_3_A
19:37 [GLY] 1A:1171 [G] 3:38 [GLY] A:1122 [G] ❌ 7RYG_3_A
19:23 [VAL] 1A:1077 [G] 3:23 [ILE] A:1028 [G] ❌ 7RYG_3_A
19:18 [ARG] 1A:1078 [A] 3:18 [ARG] A:1029 [A] ❌ 4Y4O_19_1A
19:18 [ARG] 1A:1079 [U] 3:18 [ARG] A:1030 [U] ❌ 4Y4O_19_1A
19:2 [LYS] 1A:2539 [C] 3:2 [LYS] A:2523 [C] ❌ 4Y4O_19_1A
19:23 [VAL] 1A:1079 [U] 3:23 [ILE] A:1030 [U] ❌ 4Y4O_19_1A
19:30 [PRO] 1A:2490 [A] 3:32 [ARG] A:2474 [A] ❌ 4Y4O_19_1A
19:30 [PRO] 1A:2541 [G] 3:32 [ARG] A:2525 [G] ❌ 4Y4O_19_1A
19:36 [GLN] 1A:1171 [G] 3:37 [GLN] A:1122 [G] ❌ 4Y4O_19_1A
19:37 [GLY] 1A:1078 [A] 3:38 [GLY] A:1029 [A] ❌ 4Y4O_19_1A
19:37 [GLY] 1A:1077 [G] 3:38 [GLY] A:1028 [G] ❌ 4Y4O_19_1A
19:6 [SER] 1A:1075 [A] 3:5 [ALA] A:1026 [A] ❌ 4Y4O_19_1A
19:6 [SER] 1A:1170 [C] 3:5 [ALA] A:1121 [G] ❌ 4Y4O_19_1A
19:6 [SER] 1A:1171 [G] 3:5 [ALA] A:1122 [G] ❌ 4Y4O_19_1A
19:7 [VAL] 1A:2478 [C] 3:6 [SER] A:2462 [C] ❌ 4Y4O_19_1A
19:7 [VAL] 1A:1076 [G] 3:6 [SER] A:1027 [C] ❌ 4Y4O_19_1A
19:7 [VAL] 1A:2479 [C] 3:6 [SER] A:2463 [C] ❌ 4Y4O_19_1A
19:9 [ARG] 1A:2479 [C] 3:8 [LYS] A:2463 [C] ❌ 4Y4O_19_1A
19:9 [ARG] 1A:1077 [G] 3:8 [LYS] A:1028 [G] ❌ 4Y4O_19_1A
19:22 [ARG] 1A:2753 [A] 3:22 [VAL] A:2736 [A] ❌ 7RYG_3:22, 7RYG_A:2736 no longer at interface
19:8 [LYS] 1A:2480 [G] 3:7 [VAL] A:2464 [A] ❌ 7RYG_A:2464 no longer at interface
19:2 [LYS] 1A:2491 [G] 3:2 [LYS] A:2475 [U] ❌ 7RYG_A:2475 no longer at interface
19:15 [LYS] 1A:2763 [A] 3:15 [LYS] A:2746 [A] ❌ 7RYG_A:2746 no longer at interface
19:30 [PRO] 1A:2488 [A] 3:32 [ARG] A:2472 [A] ❌ 4Y4O_1A:2488 no longer at interface
19:22 [ARG] 1A:2754 [A] 3:22 [VAL] A:2737 [A] ❌ 7RYG_3:22 no longer at interface
19:22 [ARG] 1A:2755 [C] 3:22 [VAL] A:2738 [C] ❌ 7RYG_3:22 no longer at interface
19:10 [ILE] 1A:2489 [C] 3:9 [LYS] A:2473 [U] ❌ 7RYG_3:9 no longer at interface
19:29 [ASN] 1A:2540 [U] 3:31 [PRO] A:2524 [U] ❌ 4Y4O_19:29 no longer at interface
19:29 [ASN] 1A:2539 [C] 3:31 [PRO] A:2523 [C] ❌ 4Y4O_19:29 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L36 Bacterial large subunit ribosomal RNA 0.96 2.87 0.58 0.88 0.96 0.96 0.97 0.64 0.32 0.35 0.24


Other pairs involving 4Y4O_19_1A or 7RYG_3_A

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_19_1A 7OF0_4_A 0.50 0.97 3.13 0.33 Ribosomal protein L36 Bacterial large subunit ribosomal RNA compare
4Y4O_19_1A 6S0Z_4_A 0.89 0.97 1.62 0.74 Ribosomal protein L36 Bacterial large subunit ribosomal RNA compare
4Y4O_19_1A 7K00_3_a 0.92 0.96 1.0 0.69 Ribosomal protein L36 Bacterial large subunit ribosomal RNA compare
4Y4O_19_1A 7RYG_3_A 0.64 0.96 2.87 0.58 Ribosomal protein L36 Bacterial large subunit ribosomal RNA compare
6S0Z_4_A 7RYG_3_A 0.77 0.98 2.04 0.67 Ribosomal protein L36 Bacterial large subunit ribosomal RNA compare
7K00_3_a 7RYG_3_A 0.75 0.99 2.49 0.71 Ribosomal protein L36 Bacterial large subunit ribosomal RNA compare
7OF0_4_A 7RYG_3_A 0.47 0.93 2.63 0.33 Ribosomal protein L36 Bacterial large subunit ribosomal RNA compare