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All interfaces > All interologs > Interface groups > group83 > 4Y4O_1V_1A vs 7OF0_S_A

Interface analysis


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Common contacts -

4Y4O_1V
4Y4O_1A
7OF0_S
7OF0_A
Conserved?
1V:9 [GLY] 1A:1042 [A] S:103 [SER] A:2147 [G] ✔
1V:9 [GLY] 1A:1206 [G] S:103 [SER] A:2255 [C] ✔
1V:9 [GLY] 1A:1207 [C] S:103 [SER] A:2256 [U] ✔
1V:70 [ILE] 1A:1039 [G] S:169 [ARG] A:2144 [A] ✔
1V:70 [ILE] 1A:1040 [C] S:169 [ARG] A:2145 [G] ✔
1V:87 [HIS] 1A:1038 [C] S:186 [VAL] A:2143 [G] ✔
1V:87 [HIS] 1A:1039 [G] S:186 [VAL] A:2144 [A] ✔
1V:24 [LYS] 1A:1208 [G] S:119 [GLU] A:2257 [C] ✔
1V:24 [LYS] 1A:1209 [G] S:119 [GLU] A:2258 [A] ✔
1V:8 [GLY] 1A:1207 [C] S:102 [ALA] A:2256 [U] ✔
1V:11 [GLN] 1A:1042 [A] S:105 [GLN] A:2147 [G] ✔
1V:85 [LYS] 1A:1038 [C] S:184 [ARG] A:2143 [G] ✔
1V:10 [LYS] 1A:1039 [G] S:104 [ARG] A:2144 [A] ✔
1V:10 [LYS] 1A:1040 [C] S:104 [ARG] A:2145 [G] ✔
1V:10 [LYS] 1A:1042 [A] S:104 [ARG] A:2147 [G] ✔
1V:10 [LYS] 1A:1207 [C] S:104 [ARG] A:2256 [U] ✔
1V:6 [LYS] 1A:1206 [G] S:100 [HIS] A:2255 [C] ✔
1V:90 [PRO] 1A:1208 [G] S:189 [PRO] A:2257 [C] ✔
1V:74 [LYS] 1A:1037 [C] S:173 [ARG] A:2142 [A] ✔
1V:74 [LYS] 1A:1038 [C] S:173 [ARG] A:2143 [G] ✔
1V:79 [VAL] 1A:588 [C] S:178 [LYS] A:1846 [C] ✔
1V:79 [VAL] 1A:589 [U] S:178 [LYS] A:1847 [U] ✔
1V:79 [VAL] 1A:1019 [G] S:178 [LYS] A:2125 [C] ✔
1V:79 [VAL] 1A:1233 [U] S:178 [LYS] A:2264 [A] ✔
1V:83 [ARG] 1A:861 [C] S:182 [LYS] A:2024 [C] ✔
1V:83 [ARG] 1A:862 [C] S:182 [LYS] A:2025 [C] ✔
1V:83 [ARG] 1A:1232 [G] S:182 [LYS] A:2263 [C] ✔
1V:81 [TYR] 1A:1231 [G] S:180 [PHE] A:2262 [C] ✔
1V:81 [TYR] 1A:1232 [G] S:180 [PHE] A:2263 [C] ✔
1V:81 [TYR] 1A:1233 [U] S:180 [PHE] A:2264 [A] ✔
1V:84 [LYS] 1A:861 [C] S:183 [LYS] A:2024 [C] ✔
1V:77 [ALA] 1A:587 [C] S:176 [LYS] A:1845 [C] ✔
1V:77 [ALA] 1A:588 [C] S:176 [LYS] A:1846 [C] ✔
1V:78 [LYS] 1A:587 [C] S:177 [ARG] A:1845 [C] ✔
1V:78 [LYS] 1A:588 [C] S:177 [ARG] A:1846 [C] ✔
1V:78 [LYS] 1A:589 [U] S:177 [ARG] A:1847 [U] ✔
1V:78 [LYS] 1A:590 [A] S:177 [ARG] A:1848 [U] ✔
1V:78 [LYS] 1A:594 [A] S:177 [ARG] A:1852 [C] ✔
1V:23 [GLU] 1A:1207 [C] S:118 [ASN] A:2256 [U] ✔
1V:23 [GLU] 1A:1208 [G] S:118 [ASN] A:2257 [C] ✔
1V:89 [GLN] 1A:1039 [G] S:188 [THR] A:2144 [A] ✔
1V:82 [ARG] 1A:861 [C] S:181 [LYS] A:2024 [C] ✔
1V:76 [LYS] 1A:588 [C] S:175 [ARG] A:1846 [C] ✔
1V:76 [LYS] 1A:1019 [G] S:175 [ARG] A:2125 [C] ✔
1V:76 [LYS] 1A:1021 [G] S:175 [ARG] A:2126 [U] ✔
1V:76 [LYS] 1A:1231 [G] S:175 [ARG] A:2262 [C] ✔
1V:76 [LYS] 1A:1232 [G] S:175 [ARG] A:2263 [C] ✔
1V:72 [VAL] 1A:1038 [C] S:171 [ILE] A:2143 [G] ✔
1V:72 [VAL] 1A:1039 [G] S:171 [ILE] A:2144 [A] ✔
1V:75 [PHE] 1A:587 [C] S:174 [PHE] A:1845 [C] ✔
1V:75 [PHE] 1A:588 [C] S:174 [PHE] A:1846 [C] ✔
1V:80 [GLN] 1A:588 [C] S:179 [ASN] A:1846 [C] ✔
1V:80 [GLN] 1A:589 [U] S:179 [ASN] A:1847 [U] ✔
1V:87 [HIS] 1A:1208 [G] S:186 [VAL] A:2257 [C] ❌ 7OF0_S_A
1V:8 [GLY] 1A:1206 [G] S:102 [ALA] A:2255 [C] ❌ 7OF0_S_A
1V:85 [LYS] 1A:862 [C] S:184 [ARG] A:2025 [C] ❌ 7OF0_S_A
1V:85 [LYS] 1A:1037 [C] S:184 [ARG] A:2142 [A] ❌ 7OF0_S_A
1V:10 [LYS] 1A:1206 [G] S:104 [ARG] A:2255 [C] ❌ 7OF0_S_A
1V:90 [PRO] 1A:1209 [G] S:189 [PRO] A:2258 [A] ❌ 7OF0_S_A
1V:77 [ALA] 1A:1021 [G] S:176 [LYS] A:2126 [U] ❌ 7OF0_S_A
1V:23 [GLU] 1A:1039 [G] S:118 [ASN] A:2144 [A] ❌ 7OF0_S_A
1V:23 [GLU] 1A:1040 [C] S:118 [ASN] A:2145 [G] ❌ 7OF0_S_A
1V:89 [GLN] 1A:1038 [C] S:188 [THR] A:2143 [G] ❌ 7OF0_S_A
1V:89 [GLN] 1A:1208 [G] S:188 [THR] A:2257 [C] ❌ 7OF0_S_A
1V:82 [ARG] 1A:587 [C] S:181 [LYS] A:1845 [C] ❌ 7OF0_S_A
1V:82 [ARG] 1A:588 [C] S:181 [LYS] A:1846 [C] ❌ 7OF0_S_A
1V:9 [GLY] 1A:1040 [C] S:103 [SER] A:2145 [G] ❌ 4Y4O_1V_1A
1V:74 [LYS] 1A:1231 [G] S:173 [ARG] A:2262 [C] ❌ 4Y4O_1V_1A
1V:77 [ALA] 1A:594 [A] S:176 [LYS] A:1852 [C] ❌ 4Y4O_1V_1A
1V:83 [ARG] 1A:1231 [G] S:182 [LYS] A:2262 [C] ❌ 4Y4O_1V_1A
1V:74 [LYS] 1A:1036 [A] S:173 [ARG] A:2141 [U] ❌ 7OF0_A:2141 no longer at interface
1V:78 [LYS] 1A:598 [A] S:177 [ARG] A:1856 [A] ❌ 7OF0_A:1856 no longer at interface
1V:82 [ARG] 1A:1299 [A] S:181 [LYS] A:2297 [A] ❌ 7OF0_A:2297 no longer at interface
1V:76 [LYS] 1A:1036 [A] S:175 [ARG] A:2141 [U] ❌ 7OF0_A:2141 no longer at interface
1V:80 [GLN] 1A:1299 [A] S:179 [ASN] A:2297 [A] ❌ 7OF0_A:2297 no longer at interface
1V:10 [LYS] 1A:1041 [C] S:104 [ARG] A:2146 [A] ❌ 4Y4O_1A:1041 no longer at interface
1V:68 [LYS] 1A:560 [C] S:167 [TRP] A:1831 [G] ❌ 4Y4O_1V:68, 4Y4O_1A:560 no longer at interface
1V:70 [ILE] 1A:561 [A] S:169 [ARG] A:1832 [A] ❌ 4Y4O_1A:561 no longer at interface
1V:74 [LYS] 1A:1230 [C] S:173 [ARG] A:2261 [C] ❌ 4Y4O_1A:1230 no longer at interface
1V:77 [ALA] 1A:586 [G] S:176 [LYS] A:1844 [A] ❌ 4Y4O_1A:586 no longer at interface
1V:77 [ALA] 1A:585 [U] S:176 [LYS] A:1843 [U] ❌ 4Y4O_1A:585 no longer at interface
1V:78 [LYS] 1A:591 [U] S:177 [ARG] A:1849 [C] ❌ 4Y4O_1A:591 no longer at interface
1V:78 [LYS] 1A:597 [C] S:177 [ARG] A:1855 [A] ❌ 4Y4O_1A:597 no longer at interface
1V:79 [VAL] 1A:593 [G] S:178 [LYS] A:1851 [G] ❌ 4Y4O_1A:593 no longer at interface
1V:79 [VAL] 1A:1234 [A] S:178 [LYS] A:2265 [A] ❌ 4Y4O_1A:1234 no longer at interface
1V:79 [VAL] 1A:1017 [G] S:178 [LYS] A:2124 [A] ❌ 4Y4O_1A:1017 no longer at interface
1V:80 [GLN] 1A:1234 [A] S:179 [ASN] A:2265 [A] ❌ 4Y4O_1A:1234 no longer at interface
1V:82 [ARG] 1A:860 [U] S:181 [LYS] A:2023 [U] ❌ 4Y4O_1A:860 no longer at interface
1V:82 [ARG] 1A:1298 [G] S:181 [LYS] A:2296 [U] ❌ 4Y4O_1A:1298 no longer at interface
1V:83 [ARG] 1A:863 [C] S:182 [LYS] A:2026 [A] ❌ 4Y4O_1A:863 no longer at interface
1V:83 [ARG] 1A:1230 [C] S:182 [LYS] A:2261 [C] ❌ 4Y4O_1A:1230 no longer at interface
1V:84 [LYS] 1A:860 [U] S:183 [LYS] A:2023 [U] ❌ 4Y4O_1A:860 no longer at interface
1V:85 [LYS] 1A:1230 [C] S:184 [ARG] A:2261 [C] ❌ 4Y4O_1A:1230 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L21p Bacterial large subunit ribosomal RNA 0.94 1.38 0.13 0.92 0.97 0.8 0.62 0.68 0.55 0.23 0.57


Other pairs involving 4Y4O_1V_1A or 7OF0_S_A

Total number of entries: 6

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1V_1A 6S0Z_P_A 0.70 0.97 0.88 0.61 Ribosomal protein L21p Bacterial large subunit ribosomal RNA compare
4Y4O_1V_1A 7K00_q_a 0.83 0.96 1.09 0.57 Ribosomal protein L21p Bacterial large subunit ribosomal RNA compare
4Y4O_1V_1A 7OF0_S_A 0.68 0.94 1.38 0.13 Ribosomal protein L21p Bacterial large subunit ribosomal RNA compare
6S0Z_P_A 7OF0_S_A 0.60 0.93 1.6 0.23 Ribosomal protein L21p Bacterial large subunit ribosomal RNA compare
4Y4O_1V_1A 7RYG_Q_A 0.88 0.96 1.48 0.52 Ribosomal protein L21p Bacterial large subunit ribosomal RNA compare
7OF0_S_A 7RYG_Q_A 0.67 0.9 1.86 0.21 Ribosomal protein L21p Bacterial large subunit ribosomal RNA compare