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All interfaces > All interologs > Interface groups > group83 > 7RYG_Q_A

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Licorice
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Licorice
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Chain
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Hydrophobicity
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Conservation*

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Contacts -

7RYG_Q
7RYG_A
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
Q:8 [GLY] A:1158 [G] 4.38 A:991 [C] 68.62
Q:8 [GLY] A:1159 [C] 3.26 A:990 [G] 68.62
Q:9 [GLY] A:993 [A] 3.32 A:1157 [U] 87.6
Q:9 [GLY] A:1158 [G] 4.0 A:991 [C] 87.6
Q:9 [GLY] A:1159 [C] 3.83 A:990 [G] 87.6
Q:10 [LYS] A:990 [G] 4.73 A:1159 [C] 72.74
Q:10 [LYS] A:991 [C] 2.77 A:1158 [G] base:SC 72.74
Q:10 [LYS] A:993 [A] 3.3 A:1157 [U] 72.74
Q:10 [LYS] A:1158 [G] 3.62 A:991 [C] 72.74
Q:10 [LYS] A:1159 [C] 4.12 A:990 [G] 72.74
Q:11 [GLN] A:993 [A] 4.85 A:1157 [U] 99.0
Q:18 [GLU] A:547 [U] 3.51 51.11
Q:19 [THR] A:547 [U] 3.17 base:BB, base:BB 24.47
Q:23 [GLU] A:990 [G] 3.1 A:1159 [C] base:SC 68.52
Q:23 [GLU] A:991 [C] 4.34 A:1158 [G] 68.52
Q:23 [GLU] A:1159 [C] 3.41 A:990 [G] 68.52
Q:23 [GLU] A:1160 [G] 3.7 A:989 [C] 68.52
Q:24 [LEU] A:1160 [G] 3.82 A:989 [C] 55.85
Q:24 [LEU] A:1161 [G] 3.8 A:988 [C] 55.85
Q:68 [ARG] A:1218 [G] 3.0 A:1221 [A] 74.67
Q:68 [ARG] A:1219 [A] 3.33 74.67
Q:71 [LYS] A:1218 [G] 3.09 A:1221 [A] 98.89
Q:71 [LYS] A:1219 [A] 4.55 98.89
Q:71 [LYS] A:1220 [G] 2.82 98.89
Q:72 [ILE] A:990 [G] 4.72 A:1159 [C] 74.85
Q:74 [ILE] A:989 [C] 3.62 A:1160 [G] 71.26
Q:74 [ILE] A:990 [G] 3.82 A:1159 [C] 71.26
Q:76 [LYS] A:988 [C] 3.41 A:1161 [G] 83.44
Q:76 [LYS] A:989 [C] 2.85 A:1160 [G] 83.44
Q:77 [MET] A:562 [C] 4.02 A:575 [G] 60.28
Q:77 [MET] A:563 [C] 4.36 A:574 [U] 60.28
Q:78 [ARG] A:563 [C] 4.73 A:574 [U] 74.95
Q:78 [ARG] A:971 [G] 3.54 A:987 [A] 74.95
Q:78 [ARG] A:972 [A] 3.6 A:986 [G] sugar:SC 74.95
Q:78 [ARG] A:987 [A] 3.0 A:971 [G] base:SC 74.95
Q:78 [ARG] A:1181 [G] 4.32 74.95
Q:79 [ARG] A:561 [A] 2.93 A:576 [G] 73.57
Q:79 [ARG] A:562 [C] 3.09 A:575 [G] 73.57
Q:79 [ARG] A:563 [C] 3.5 A:574 [U] 73.57
Q:79 [ARG] A:570 [A] 3.51 73.57
Q:80 [ARG] A:563 [C] 3.02 A:574 [U] 91.82
Q:80 [ARG] A:564 [U] 3.59 A:573 [A] 91.82
Q:80 [ARG] A:565 [U] 4.24 91.82
Q:80 [ARG] A:569 [U] 3.18 91.82
Q:80 [ARG] A:570 [A] 2.88 91.82
Q:80 [ARG] A:571 [U] 3.97 91.82
Q:81 [LYS] A:564 [U] 4.78 A:573 [A] 77.51
Q:81 [LYS] A:566 [U] 3.18 A:2026 [6MZ] base:SC 77.51
Q:81 [LYS] A:568 [G] 4.91 77.51
Q:81 [LYS] A:969 [A] 3.74 A:819 [A] 77.51
Q:81 [LYS] A:970 [A] 2.51 A:818 [A] 77.51
Q:81 [LYS] A:971 [G] 4.12 A:987 [A] 77.51
Q:81 [LYS] A:1183 [U] 3.56 A:817 [A] 77.51
Q:82 [HIS] A:564 [U] 4.61 A:573 [A] 69.72
Q:82 [HIS] A:1183 [U] 4.66 A:817 [A] 69.72
Q:82 [HIS] A:1184 [A] 3.56 A:816 [G] 69.72
Q:83 [TYR] A:1181 [G] 4.34 65.91
Q:83 [TYR] A:1182 [G] 2.98 65.91
Q:83 [TYR] A:1183 [U] 3.72 A:817 [A] 65.91
Q:84 [ARG] A:811 [U] 3.37 A:1189 [A] 69.82
Q:84 [ARG] A:812 [C] 4.47 A:1188 [G] 69.82
Q:85 [LYS] A:812 [C] 3.62 A:1188 [G] 75.72
Q:85 [LYS] A:813 [C] 3.06 A:1187 [G] 75.72
Q:85 [LYS] A:814 [C] 4.25 A:1186 [G] 75.72
Q:85 [LYS] A:1182 [G] 3.27 75.72
Q:86 [GLN] A:812 [C] 3.14 A:1188 [G] 71.17
Q:86 [GLN] A:1219 [A] 4.65 71.17
Q:86 [GLN] A:1220 [G] 4.75 71.17
Q:87 [GLN] A:988 [C] 4.13 A:1161 [G] 17.05
Q:87 [GLN] A:989 [C] 3.73 A:1160 [G] 17.05
Q:87 [GLN] A:1219 [A] 3.69 17.05
Q:87 [GLN] A:1220 [G] 4.68 17.05
Q:88 [GLY] A:1219 [A] 3.32 96.89
Q:88 [GLY] A:1220 [G] 4.21 96.89
Q:89 [HIS] A:989 [C] 3.02 A:1160 [G] 86.99
Q:89 [HIS] A:990 [G] 3.26 A:1159 [C] 86.99
Q:89 [HIS] A:1160 [G] 3.85 A:989 [C] 86.99
Q:89 [HIS] A:1219 [A] 4.64 86.99
Q:90 [ARG] A:1217 [U] 3.69 A:1222 [A] 98.97
Q:90 [ARG] A:1218 [G] 2.85 A:1221 [A] 98.97
Q:91 [GLN] A:990 [G] 3.48 A:1159 [C] base/AA stacks 81.34
Q:91 [GLN] A:1160 [G] 3.3 A:989 [C] base:SC, base:SC 81.34
Q:92 [TRP] A:1160 [G] 4.59 A:989 [C] 10.43
Q:92 [TRP] A:1161 [G] 4.61 A:988 [C] 10.43

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group83 7RYG_Q_A Q: 50s ribosomal protein l21, Acinetobacter baumannii (strain ab0057) (natural) A: 23s ribosomal RNA, Acinetobacter baumannii ab0057 (natural) B7I6V9 Ribosomal protein L21p Bacterial large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1V_1A 7RYG_Q_A 0.88 0.96 1.48 0.52 Ribosomal protein L21p Bacterial large subunit ribosomal RNA compare
6S0Z_P_A 7RYG_Q_A 0.76 0.98 0.84 0.52 Ribosomal protein L21p Bacterial large subunit ribosomal RNA compare
7OF0_S_A 7RYG_Q_A 0.67 0.9 1.86 0.21 Ribosomal protein L21p Bacterial large subunit ribosomal RNA compare