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All interfaces > All interologs > Interface groups > group84 > 4Y4O_1b_1a vs 6S0X_b_a

Interface analysis


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Common contacts -

4Y4O_1b
4Y4O_1a
6S0X_b
6S0X_a
Conserved?
1b:172 [ILE] 1a:1101 [A] b:171 [ASN] a:1112 [A] ✔
1b:96 [ARG] 1a:1100 [C] b:95 [ARG] a:1111 [C] ✔
1b:96 [ARG] 1a:1101 [A] b:95 [ARG] a:1112 [A] ✔
1b:96 [ARG] 1a:1102 [A] b:95 [ARG] a:1113 [A] ✔
1b:98 [LEU] 1a:1102 [A] b:97 [LEU] a:1113 [A] ✔
1b:97 [TRP] 1a:1101 [A] b:96 [TRP] a:1112 [A] ✔
1b:108 [ILE] 1a:1103 [C] b:107 [ILE] a:1114 [C] ✔
1b:140 [HIS] 1a:1097 [C] b:139 [LYS] a:1108 [C] ✔
1b:140 [HIS] 1a:1098 [C] b:139 [LYS] a:1109 [C] ✔
1b:103 [THR] 1a:1074 [G] b:102 [THR] a:1085 [G] ✔
1b:103 [THR] 1a:1075 [C] b:102 [THR] a:1086 [U] ✔
1b:22 [LYS] 1a:830 [G] b:20 [THR] a:838 [G] ✔
1b:104 [ASN] 1a:1073 [U] b:103 [ASN] a:1084 [U] ✔
1b:104 [ASN] 1a:1074 [G] b:103 [ASN] a:1085 [G] ✔
1b:24 [TRP] 1a:829 [G] b:23 [TRP] a:837 [A] ✔
1b:99 [GLY] 1a:1101 [A] b:98 [GLY] a:1112 [A] ✔
1b:99 [GLY] 1a:1102 [A] b:98 [GLY] a:1113 [A] ✔
1b:100 [GLY] 1a:1074 [G] b:99 [GLY] a:1085 [G] ✔
1b:100 [GLY] 1a:1101 [A] b:99 [GLY] a:1112 [A] ✔
1b:111 [ARG] 1a:1103 [C] b:110 [ARG] a:1114 [C] ✔
1b:111 [ARG] 1a:1104 [G] b:110 [ARG] a:1115 [G] ✔
1b:107 [THR] 1a:1072 [G] b:106 [THR] a:1083 [G] ✔
1b:107 [THR] 1a:1073 [U] b:106 [THR] a:1084 [U] ✔
1b:107 [THR] 1a:1103 [C] b:106 [THR] a:1114 [C] ✔
1b:26 [PRO] 1a:828 [A] b:25 [PRO] a:836 [A] ✔
1b:179 [LYS] 1a:1074 [G] b:178 [LYS] a:1085 [G] ✔
1b:179 [LYS] 1a:1075 [C] b:178 [LYS] a:1086 [U] ✔
1b:179 [LYS] 1a:1076 [C] b:178 [LYS] a:1087 [C] ✔
1b:96 [ARG] 1a:1103 [C] b:95 [ARG] a:1114 [C] ❌ 6S0X_b_a
1b:98 [LEU] 1a:1103 [C] b:97 [LEU] a:1114 [C] ❌ 6S0X_b_a
1b:103 [THR] 1a:1101 [A] b:102 [THR] a:1112 [A] ❌ 6S0X_b_a
1b:22 [LYS] 1a:831 [U] b:20 [THR] a:839 [U] ❌ 6S0X_b_a
1b:104 [ASN] 1a:1102 [A] b:103 [ASN] a:1113 [A] ❌ 6S0X_b_a
1b:104 [ASN] 1a:1103 [C] b:103 [ASN] a:1114 [C] ❌ 6S0X_b_a
1b:24 [TRP] 1a:830 [G] b:23 [TRP] a:838 [G] ❌ 6S0X_b_a
1b:99 [GLY] 1a:1103 [C] b:98 [GLY] a:1114 [C] ❌ 6S0X_b_a
1b:26 [PRO] 1a:829 [G] b:25 [PRO] a:837 [A] ❌ 6S0X_b_a
1b:144 [ARG] 1a:1098 [C] b:143 [ARG] a:1109 [C] ❌ 6S0X_b_a
1b:108 [ILE] 1a:1102 [A] b:107 [ILE] a:1113 [A] ❌ 4Y4O_1b_1a
1b:144 [ARG] 1a:1103 [C] b:143 [ARG] a:1114 [C] ❌ 4Y4O_1b_1a
1b:98 [LEU] 1a:1101 [A] b:97 [LEU] a:1112 [A] ❌ 4Y4O_1b_1a
1b:99 [GLY] 1a:1074 [G] b:98 [GLY] a:1085 [G] ❌ 4Y4O_1b_1a
1b:148 [TYR] 1a:1099 [G] b:147 [PHE] a:1110 [G] ❌ 6S0X_b:147, 6S0X_a:1110 no longer at interface
1b:27 [LYS] 1a:859 [A] b:26 [LYS] a:868 [C] ❌ 6S0X_b:26, 6S0X_a:868 no longer at interface
1b:147 [LYS] 1a:1099 [G] b:146 [LYS] a:1110 [G] ❌ 6S0X_b:146, 6S0X_a:1110 no longer at interface
1b:22 [LYS] 1a:848 [C] b:20 [THR] a:857 [C] ❌ 6S0X_a:857 no longer at interface
1b:22 [LYS] 1a:849 [C] b:20 [THR] a:858 [C] ❌ 6S0X_a:858 no longer at interface
1b:111 [ARG] 1a:1105 [A] b:110 [ARG] a:1116 [A] ❌ 6S0X_a:1116 no longer at interface
1b:144 [ARG] 1a:1099 [G] b:143 [ARG] a:1110 [G] ❌ 6S0X_a:1110 no longer at interface
1b:133 [LYS] 1a:1158 [C] b:132 [LYS] a:1169 [U] ❌ 6S0X_b:132, 6S0X_a:1169 no longer at interface
1b:133 [LYS] 1a:1159 [U] b:132 [LYS] a:1170 [G] ❌ 6S0X_b:132, 6S0X_a:1170 no longer at interface
1b:133 [LYS] 1a:1160 [G] b:132 [LYS] a:1171 [C] ❌ 6S0X_b:132, 6S0X_a:1171 no longer at interface
1b:137 [ARG] 1a:1096 [C] b:136 [GLU] a:1107 [C] ❌ 4Y4O_1b:137, 4Y4O_1a:1096 no longer at interface
1b:176 [GLU] 1a:1101 [A] b:175 [GLU] a:1112 [A] ❌ 6S0X_b:175 no longer at interface
1b:110 [GLN] 1a:1104 [G] b:109 [LYS] a:1115 [G] ❌ 6S0X_b:109 no longer at interface
1b:175 [ARG] 1a:1076 [C] b:174 [ALA] a:1087 [C] ❌ 6S0X_b:174 no longer at interface
1b:175 [ARG] 1a:1101 [A] b:174 [ALA] a:1112 [A] ❌ 6S0X_b:174 no longer at interface
1b:106 [LYS] 1a:1073 [U] b:105 [LYS] a:1084 [U] ❌ 4Y4O_1b:106 no longer at interface
1b:114 [ARG] 1a:1104 [G] b:113 [ARG] a:1115 [G] ❌ 4Y4O_1b:114 no longer at interface
1b:114 [ARG] 1a:1103 [C] b:113 [ARG] a:1114 [C] ❌ 4Y4O_1b:114 no longer at interface
1b:137 [ARG] 1a:1097 [C] b:136 [GLU] a:1108 [C] ❌ 4Y4O_1b:137 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA 0.95 1.78 0.67 0.89 0.95 0.81 0.94 0.63 0.56 0.10 0.58


Other pairs involving 4Y4O_1b_1a or 6S0X_b_a

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1b_1a 7K00_B_A 0.80 0.98 1.1 0.62 Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA compare
4Y4O_1b_1a 7RYG_b_a 0.63 0.92 1.92 0.58 Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA compare
4Y4O_1b_1a 7O7Y_AZ_A2 0.70 0.91 1.35 0.24 Ribosomal protein S2/SIS domain compare
4Y4O_1b_1a 6S0X_b_a 0.63 0.95 1.78 0.67 Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA compare
6S0X_b_a 7RYG_b_a 0.60 0.97 1.98 0.63 Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA compare
6S0X_b_a 7O7Y_AZ_A2 0.60 0.88 2.46 0.19 Ribosomal protein S2/SIS domain compare
6S0X_b_a 7K00_B_A 0.66 0.96 1.29 0.62 Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA compare