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All interfaces > All interologs > Interface groups > group84 > 4Y4O_1b_1a vs 7K00_B_A

Interface analysis


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Common contacts -

4Y4O_1b
4Y4O_1a
7K00_B
7K00_A
Conserved?
1b:172 [ILE] 1a:1101 [A] B:171 [ILE] A:1101 [A] ✔
1b:176 [GLU] 1a:1101 [A] B:175 [GLU] A:1101 [A] ✔
1b:96 [ARG] 1a:1100 [C] B:95 [ARG] A:1100 [C] ✔
1b:96 [ARG] 1a:1101 [A] B:95 [ARG] A:1101 [A] ✔
1b:96 [ARG] 1a:1102 [A] B:95 [ARG] A:1102 [A] ✔
1b:96 [ARG] 1a:1103 [C] B:95 [ARG] A:1103 [C] ✔
1b:27 [LYS] 1a:859 [A] B:26 [LYS] A:859 [G] ✔
1b:98 [LEU] 1a:1102 [A] B:97 [LEU] A:1102 [A] ✔
1b:98 [LEU] 1a:1103 [C] B:97 [LEU] A:1103 [C] ✔
1b:97 [TRP] 1a:1101 [A] B:96 [TRP] A:1101 [A] ✔
1b:108 [ILE] 1a:1103 [C] B:107 [VAL] A:1103 [C] ✔
1b:140 [HIS] 1a:1097 [C] B:139 [ARG] A:1097 [C] ✔
1b:140 [HIS] 1a:1098 [C] B:139 [ARG] A:1098 [C] ✔
1b:103 [THR] 1a:1074 [G] B:102 [THR] A:1074 [G] ✔
1b:103 [THR] 1a:1075 [C] B:102 [THR] A:1075 [U] ✔
1b:103 [THR] 1a:1101 [A] B:102 [THR] A:1101 [A] ✔
1b:22 [LYS] 1a:830 [G] B:20 [THR] A:830 [G] ✔
1b:104 [ASN] 1a:1073 [U] B:103 [ASN] A:1073 [U] ✔
1b:104 [ASN] 1a:1074 [G] B:103 [ASN] A:1074 [G] ✔
1b:104 [ASN] 1a:1102 [A] B:103 [ASN] A:1102 [A] ✔
1b:104 [ASN] 1a:1103 [C] B:103 [ASN] A:1103 [C] ✔
1b:24 [TRP] 1a:829 [G] B:23 [TRP] A:829 [G] ✔
1b:24 [TRP] 1a:830 [G] B:23 [TRP] A:830 [G] ✔
1b:99 [GLY] 1a:1101 [A] B:98 [GLY] A:1101 [A] ✔
1b:99 [GLY] 1a:1102 [A] B:98 [GLY] A:1102 [A] ✔
1b:99 [GLY] 1a:1103 [C] B:98 [GLY] A:1103 [C] ✔
1b:100 [GLY] 1a:1074 [G] B:99 [GLY] A:1074 [G] ✔
1b:100 [GLY] 1a:1101 [A] B:99 [GLY] A:1101 [A] ✔
1b:111 [ARG] 1a:1104 [G] B:110 [SER] A:1104 [G] ✔
1b:107 [THR] 1a:1072 [G] B:106 [THR] A:1072 [G] ✔
1b:107 [THR] 1a:1073 [U] B:106 [THR] A:1073 [U] ✔
1b:107 [THR] 1a:1103 [C] B:106 [THR] A:1103 [C] ✔
1b:110 [GLN] 1a:1104 [G] B:109 [GLN] A:1104 [G] ✔
1b:26 [PRO] 1a:828 [A] B:25 [PRO] A:828 [U] ✔
1b:26 [PRO] 1a:829 [G] B:25 [PRO] A:829 [G] ✔
1b:133 [LYS] 1a:1158 [C] B:132 [LYS] A:1158 [C] ✔
1b:133 [LYS] 1a:1159 [U] B:132 [LYS] A:1159 [U] ✔
1b:133 [LYS] 1a:1160 [G] B:132 [LYS] A:1160 [G] ✔
1b:175 [ARG] 1a:1076 [C] B:174 [LYS] A:1076 [U] ✔
1b:179 [LYS] 1a:1075 [C] B:178 [ASN] A:1075 [U] ✔
1b:22 [LYS] 1a:831 [U] B:20 [THR] A:831 [A] ❌ 7K00_B_A
1b:22 [LYS] 1a:848 [C] B:20 [THR] A:848 [C] ❌ 7K00_B_A
1b:111 [ARG] 1a:1103 [C] B:110 [SER] A:1103 [C] ❌ 7K00_B_A
1b:144 [ARG] 1a:1098 [C] B:143 [LYS] A:1098 [C] ❌ 7K00_B_A
1b:175 [ARG] 1a:1101 [A] B:174 [LYS] A:1101 [A] ❌ 7K00_B_A
1b:179 [LYS] 1a:1074 [G] B:178 [ASN] A:1074 [G] ❌ 7K00_B_A
1b:179 [LYS] 1a:1076 [C] B:178 [ASN] A:1076 [U] ❌ 7K00_B_A
1b:104 [ASN] 1a:1072 [G] B:103 [ASN] A:1072 [G] ❌ 4Y4O_1b_1a
1b:107 [THR] 1a:1104 [G] B:106 [THR] A:1104 [G] ❌ 4Y4O_1b_1a
1b:144 [ARG] 1a:1104 [G] B:143 [LYS] A:1104 [G] ❌ 4Y4O_1b_1a
1b:175 [ARG] 1a:1075 [C] B:174 [LYS] A:1075 [U] ❌ 4Y4O_1b_1a
1b:99 [GLY] 1a:1074 [G] B:98 [GLY] A:1074 [G] ❌ 4Y4O_1b_1a
1b:148 [TYR] 1a:1099 [G] B:147 [SER] A:1099 [G] ❌ 7K00_B:147, 7K00_A:1099 no longer at interface
1b:147 [LYS] 1a:1099 [G] B:146 [ASN] A:1099 [G] ❌ 7K00_B:146, 7K00_A:1099 no longer at interface
1b:22 [LYS] 1a:849 [C] B:20 [THR] A:849 [G] ❌ 7K00_A:849 no longer at interface
1b:111 [ARG] 1a:1105 [A] B:110 [SER] A:1105 [A] ❌ 7K00_A:1105 no longer at interface
1b:144 [ARG] 1a:1099 [G] B:143 [LYS] A:1099 [G] ❌ 7K00_A:1099 no longer at interface
1b:140 [HIS] 1a:1170 [A] B:139 [ARG] A:1170 [A] ❌ 4Y4O_1a:1170 no longer at interface
1b:140 [HIS] 1a:1169 [A] B:139 [ARG] A:1169 [A] ❌ 4Y4O_1a:1169 no longer at interface
1b:38 [GLY] 1a:841 [U] B:37 [LYS] A:847 [G] ❌ 4Y4O_1b:38, 4Y4O_1a:841 no longer at interface
1b:106 [LYS] 1a:1074 [G] B:105 [LYS] A:1074 [G] ❌ 4Y4O_1b:106 no longer at interface
1b:106 [LYS] 1a:1073 [U] B:105 [LYS] A:1073 [U] ❌ 4Y4O_1b:106 no longer at interface
1b:132 [LYS] 1a:1160 [G] B:131 [LYS] A:1160 [G] ❌ 4Y4O_1b:132 no longer at interface
1b:145 [LEU] 1a:1104 [G] B:144 [LEU] A:1104 [G] ❌ 4Y4O_1b:145 no longer at interface
1b:38 [GLY] 1a:848 [C] B:37 [LYS] A:848 [C] ❌ 4Y4O_1b:38 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA 0.98 1.1 0.62 0.94 0.98 0.92 0.88 0.80 0.66 0.36 0.52


Other pairs involving 4Y4O_1b_1a or 7K00_B_A

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1b_1a 7K00_B_A 0.80 0.98 1.1 0.62 Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA compare
4Y4O_1b_1a 7RYG_b_a 0.63 0.92 1.92 0.58 Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA compare
4Y4O_1b_1a 7O7Y_AZ_A2 0.70 0.91 1.35 0.24 Ribosomal protein S2/SIS domain compare
4Y4O_1b_1a 6S0X_b_a 0.63 0.95 1.78 0.67 Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA compare
6S0X_b_a 7K00_B_A 0.66 0.96 1.29 0.62 Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA compare
7K00_B_A 7O7Y_AZ_A2 0.74 0.9 1.99 0.24 Ribosomal protein S2/SIS domain compare
7K00_B_A 7RYG_b_a 0.73 0.94 1.57 0.78 Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA compare