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All interfaces > All interologs > Interface groups > group84 > 4Y4O_1b_1a vs 7RYG_b_a

Interface analysis


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Common contacts -

4Y4O_1b
4Y4O_1a
7RYG_b
7RYG_a
Conserved?
1b:172 [ILE] 1a:1101 [A] b:173 [ILE] a:1098 [A] ✔
1b:176 [GLU] 1a:1101 [A] b:177 [GLU] a:1098 [A] ✔
1b:96 [ARG] 1a:1100 [C] b:97 [ARG] a:1097 [C] ✔
1b:98 [LEU] 1a:1102 [A] b:99 [LEU] a:1099 [A] ✔
1b:98 [LEU] 1a:1103 [C] b:99 [LEU] a:1100 [C] ✔
1b:140 [HIS] 1a:1097 [C] b:141 [ARG] a:1094 [C] ✔
1b:140 [HIS] 1a:1098 [C] b:141 [ARG] a:1095 [C] ✔
1b:103 [THR] 1a:1074 [G] b:104 [THR] a:1071 [G] ✔
1b:103 [THR] 1a:1075 [C] b:104 [THR] a:1072 [U] ✔
1b:103 [THR] 1a:1101 [A] b:104 [THR] a:1098 [A] ✔
1b:22 [LYS] 1a:830 [G] b:22 [THR] a:827 [C] ✔
1b:104 [ASN] 1a:1073 [U] b:105 [ASN] a:1070 [U] ✔
1b:104 [ASN] 1a:1074 [G] b:105 [ASN] a:1071 [G] ✔
1b:24 [TRP] 1a:829 [G] b:25 [TRP] a:826 [G] ✔
1b:24 [TRP] 1a:830 [G] b:25 [TRP] a:827 [C] ✔
1b:99 [GLY] 1a:1101 [A] b:100 [GLY] a:1098 [A] ✔
1b:99 [GLY] 1a:1102 [A] b:100 [GLY] a:1099 [A] ✔
1b:100 [GLY] 1a:1101 [A] b:101 [GLY] a:1098 [A] ✔
1b:111 [ARG] 1a:1103 [C] b:112 [SER] a:1100 [C] ✔
1b:107 [THR] 1a:1072 [G] b:108 [THR] a:1069 [G] ✔
1b:107 [THR] 1a:1073 [U] b:108 [THR] a:1070 [U] ✔
1b:107 [THR] 1a:1103 [C] b:108 [THR] a:1100 [C] ✔
1b:26 [PRO] 1a:828 [A] b:27 [PRO] a:825 [A] ✔
1b:26 [PRO] 1a:829 [G] b:27 [PRO] a:826 [G] ✔
1b:133 [LYS] 1a:1158 [C] b:134 [ARG] a:1155 [C] ✔
1b:179 [LYS] 1a:1075 [C] b:180 [ASN] a:1072 [U] ✔
1b:96 [ARG] 1a:1101 [A] b:97 [ARG] a:1098 [A] ❌ 7RYG_b_a
1b:96 [ARG] 1a:1102 [A] b:97 [ARG] a:1099 [A] ❌ 7RYG_b_a
1b:96 [ARG] 1a:1103 [C] b:97 [ARG] a:1100 [C] ❌ 7RYG_b_a
1b:22 [LYS] 1a:831 [U] b:22 [THR] a:828 [C] ❌ 7RYG_b_a
1b:104 [ASN] 1a:1102 [A] b:105 [ASN] a:1099 [A] ❌ 7RYG_b_a
1b:104 [ASN] 1a:1103 [C] b:105 [ASN] a:1100 [C] ❌ 7RYG_b_a
1b:99 [GLY] 1a:1103 [C] b:100 [GLY] a:1100 [C] ❌ 7RYG_b_a
1b:100 [GLY] 1a:1074 [G] b:101 [GLY] a:1071 [G] ❌ 7RYG_b_a
1b:179 [LYS] 1a:1074 [G] b:180 [ASN] a:1071 [G] ❌ 7RYG_b_a
1b:104 [ASN] 1a:1101 [A] b:105 [ASN] a:1098 [A] ❌ 4Y4O_1b_1a
1b:96 [ARG] 1a:1099 [G] b:97 [ARG] a:1096 [G] ❌ 4Y4O_1b_1a
1b:27 [LYS] 1a:859 [A] b:28 [LYS] a:856 [C] ❌ 7RYG_b:28, 7RYG_a:856 no longer at interface
1b:22 [LYS] 1a:848 [C] b:22 [THR] a:845 [C] ❌ 7RYG_a:845 no longer at interface
1b:22 [LYS] 1a:849 [C] b:22 [THR] a:846 [U] ❌ 7RYG_a:846 no longer at interface
1b:111 [ARG] 1a:1104 [G] b:112 [SER] a:1101 [G] ❌ 7RYG_a:1101 no longer at interface
1b:111 [ARG] 1a:1105 [A] b:112 [SER] a:1102 [A] ❌ 7RYG_a:1102 no longer at interface
1b:110 [GLN] 1a:1104 [G] b:111 [GLN] a:1101 [G] ❌ 7RYG_b:111, 7RYG_a:1101 no longer at interface
1b:133 [LYS] 1a:1159 [U] b:134 [ARG] a:1156 [U] ❌ 7RYG_a:1156 no longer at interface
1b:133 [LYS] 1a:1160 [G] b:134 [ARG] a:1157 [G] ❌ 7RYG_a:1157 no longer at interface
1b:175 [ARG] 1a:1076 [C] b:176 [LYS] a:1073 [C] ❌ 7RYG_b:176, 7RYG_a:1073 no longer at interface
1b:179 [LYS] 1a:1076 [C] b:180 [ASN] a:1073 [C] ❌ 7RYG_a:1073 no longer at interface
1b:140 [HIS] 1a:1169 [A] b:141 [ARG] a:1166 [A] ❌ 4Y4O_1a:1169 no longer at interface
1b:148 [TYR] 1a:1099 [G] b:149 [SER] a:1096 [G] ❌ 7RYG_b:149 no longer at interface
1b:97 [TRP] 1a:1101 [A] b:98 [TRP] a:1098 [A] ❌ 7RYG_b:98 no longer at interface
1b:108 [ILE] 1a:1103 [C] b:109 [LEU] a:1100 [C] ❌ 7RYG_b:109 no longer at interface
1b:147 [LYS] 1a:1099 [G] b:148 [ARG] a:1096 [G] ❌ 7RYG_b:148 no longer at interface
1b:144 [ARG] 1a:1098 [C] b:145 [LYS] a:1095 [C] ❌ 7RYG_b:145 no longer at interface
1b:144 [ARG] 1a:1099 [G] b:145 [LYS] a:1096 [G] ❌ 7RYG_b:145 no longer at interface
1b:175 [ARG] 1a:1101 [A] b:176 [LYS] a:1098 [A] ❌ 7RYG_b:176 no longer at interface
1b:106 [LYS] 1a:1073 [U] b:107 [LYS] a:1070 [U] ❌ 4Y4O_1b:106 no longer at interface
1b:29 [ALA] 1a:828 [A] b:30 [ARG] a:825 [A] ❌ 4Y4O_1b:29 no longer at interface
1b:29 [ALA] 1a:829 [G] b:30 [ARG] a:826 [G] ❌ 4Y4O_1b:29 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA 0.92 1.92 0.58 0.94 0.91 0.84 0.89 0.63 0.59 0.10 0.66


Other pairs involving 4Y4O_1b_1a or 7RYG_b_a

Total number of entries: 6

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1b_1a 6S0X_b_a 0.63 0.95 1.78 0.67 Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA compare
4Y4O_1b_1a 7K00_B_A 0.80 0.98 1.1 0.62 Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA compare
4Y4O_1b_1a 7O7Y_AZ_A2 0.70 0.91 1.35 0.24 Ribosomal protein S2/SIS domain compare
4Y4O_1b_1a 7RYG_b_a 0.63 0.92 1.92 0.58 Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA compare
7K00_B_A 7RYG_b_a 0.73 0.94 1.57 0.78 Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA compare
6S0X_b_a 7RYG_b_a 0.60 0.97 1.98 0.63 Ribosomal protein S2/SIS domain Bacterial small subunit ribosomal RNA compare