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All interfaces > All interologs > Interface groups > group85 > 4Y4O_1f_1a vs 7K00_F_A

Interface analysis


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Common contacts -

4Y4O_1f
4Y4O_1a
7K00_F
7K00_A
Conserved?
1f:80 [ARG] 1a:671 [G] F:79 [ARG] A:671 [G] ✔
1f:80 [ARG] 1a:672 [U] F:79 [ARG] A:672 [U] ✔
1f:89 [MET] 1a:735 [C] F:88 [MET] A:735 [C] ✔
1f:89 [MET] 1a:736 [C] F:88 [MET] A:736 [C] ✔
1f:54 [LYS] 1a:710 [G] F:53 [LYS] A:710 [G] ✔
1f:54 [LYS] 1a:711 [G] F:53 [LYS] A:711 [G] ✔
1f:92 [LYS] 1a:736 [C] F:91 [ARG] A:736 [C] ✔
1f:92 [LYS] 1a:737 [A] F:91 [ARG] A:737 [C] ✔
1f:92 [LYS] 1a:738 [C] F:91 [ARG] A:738 [C] ✔
1f:69 [GLU] 1a:738 [C] F:68 [GLN] A:738 [C] ✔
1f:69 [GLU] 1a:739 [C] F:68 [GLN] A:739 [C] ✔
1f:90 [VAL] 1a:736 [C] F:89 [VAL] A:736 [C] ✔
1f:90 [VAL] 1a:737 [A] F:89 [VAL] A:737 [C] ✔
1f:51 [PRO] 1a:674 [G] F:50 [PRO] A:674 [G] ✔
1f:2 [ARG] 1a:738 [C] F:2 [ARG] A:738 [C] ✔
1f:2 [ARG] 1a:739 [C] F:2 [ARG] A:739 [C] ✔
1f:73 [ASN] 1a:737 [A] F:72 [ASP] A:737 [C] ✔
1f:50 [TYR] 1a:673 [G] F:49 [TYR] A:673 [A] ✔
1f:50 [TYR] 1a:674 [G] F:49 [TYR] A:674 [G] ✔
1f:91 [VAL] 1a:736 [C] F:90 [MET] A:736 [C] ✔
1f:91 [VAL] 1a:737 [A] F:90 [MET] A:737 [C] ✔
1f:4 [TYR] 1a:737 [A] F:4 [TYR] A:737 [C] ✔
1f:4 [TYR] 1a:738 [C] F:4 [TYR] A:738 [C] ✔
1f:87 [ARG] 1a:673 [G] F:86 [ARG] A:673 [A] ✔
1f:87 [ARG] 1a:674 [G] F:86 [ARG] A:674 [G] ✔
1f:69 [GLU] 1a:737 [A] F:68 [GLN] A:737 [C] ❌ 7K00_F_A
1f:2 [ARG] 1a:737 [A] F:2 [ARG] A:737 [C] ❌ 7K00_F_A
1f:73 [ASN] 1a:736 [C] F:72 [ASP] A:736 [C] ❌ 7K00_F_A
1f:73 [ASN] 1a:738 [C] F:72 [ASP] A:738 [C] ❌ 7K00_F_A
1f:77 [ARG] 1a:670 [G] F:76 [THR] A:670 [G] ❌ 7K00_F:76, 7K00_A:670 no longer at interface
1f:73 [ASN] 1a:670 [G] F:72 [ASP] A:670 [G] ❌ 7K00_A:670 no longer at interface
1f:94 [GLN] 1a:662 [G] F:93 [LYS] A:662 [U] ❌ 4Y4O_1f:94, 4Y4O_1a:662 no longer at interface
1f:94 [GLN] 1a:663 [A] F:93 [LYS] A:663 [A] ❌ 4Y4O_1f:94, 4Y4O_1a:663 no longer at interface
1f:72 [VAL] 1a:737 [A] F:71 [ILE] A:737 [C] ❌ 7K00_F:71 no longer at interface
1f:72 [VAL] 1a:738 [C] F:71 [ILE] A:738 [C] ❌ 7K00_F:71 no longer at interface
1f:77 [ARG] 1a:671 [G] F:76 [THR] A:671 [G] ❌ 7K00_F:76 no longer at interface
1f:52 [ILE] 1a:674 [G] F:51 [ILE] A:674 [G] ❌ 4Y4O_1f:52 no longer at interface
1f:76 [ALA] 1a:737 [A] F:75 [GLU] A:737 [C] ❌ 4Y4O_1f:76 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S6 Bacterial small subunit ribosomal RNA 0.98 1.91 0.56 0.75 0.98 0.81 0.92 0.79 0.65 0.38 0.69


Other pairs involving 4Y4O_1f_1a or 7K00_F_A

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1f_1a 7K00_F_A 0.79 0.98 1.91 0.56 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
4Y4O_1f_1a 7RYG_f_a 0.80 0.91 3.39 0.5 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
4Y4O_1f_1a 4YBB_AF_AA 0.70 0.96 3.45 0.5 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
4Y4O_1f_1a 6S0X_f_a 0.36 0.95 1.68 0.43 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
4YBB_AF_AA 7K00_F_A 0.91 0.98 2.9 0.88 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
6S0X_f_a 7K00_F_A 0.39 0.95 2.53 0.4 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
7K00_F_A 7RYG_f_a 0.85 0.93 1.75 0.67 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare