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All interfaces > All interologs > Interface groups > group85 > 4YBB_AF_AA vs 6S0X_f_a

Interface analysis


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Common contacts -

4YBB_AF
4YBB_AA
6S0X_f
6S0X_a
Conserved?
AF:89 [VAL] AA:736 [C] f:90 [MET] a:744 [U] ✔
AF:89 [VAL] AA:737 [C] f:90 [MET] a:745 [U] ✔
AF:90 [MET] AA:736 [C] f:91 [VAL] a:744 [U] ✔
AF:90 [MET] AA:737 [C] f:91 [VAL] a:745 [U] ✔
AF:49 [TYR] AA:673 [A] f:50 [TYR] a:681 [G] ✔
AF:91 [ARG] AA:736 [C] f:92 [ILE] a:744 [U] ✔
AF:91 [ARG] AA:737 [C] f:92 [ILE] a:745 [U] ✔
AF:79 [ARG] AA:672 [U] f:81 [LYS] a:680 [U] ✔
AF:88 [MET] AA:736 [C] f:89 [TYR] a:744 [U] ❌ 6S0X_f_a
AF:75 [GLU] AA:736 [C] f:77 [GLN] a:744 [U] ❌ 6S0X_f_a
AF:75 [GLU] AA:737 [C] f:77 [GLN] a:745 [U] ❌ 6S0X_f_a
AF:91 [ARG] AA:738 [C] f:92 [ILE] a:746 [U] ❌ 6S0X_f_a
AF:79 [ARG] AA:671 [G] f:81 [LYS] a:679 [G] ❌ 6S0X_f_a
AF:49 [TYR] AA:672 [U] f:50 [TYR] a:680 [U] ❌ 4YBB_AF_AA
AF:51 [ILE] AA:710 [G] f:51 [GLU] a:718 [G] ❌ 4YBB_AF_AA
AF:75 [GLU] AA:671 [G] f:77 [GLN] a:679 [G] ❌ 4YBB_AF_AA
AF:88 [MET] AA:671 [G] f:89 [TYR] a:679 [G] ❌ 4YBB_AF_AA
AF:93 [LYS] AA:662 [U] f:94 [GLU] a:670 [A] ❌ 6S0X_f:94, 6S0X_a:670 no longer at interface
AF:88 [MET] AA:735 [C] f:89 [TYR] a:743 [C] ❌ 6S0X_a:743 no longer at interface
AF:49 [TYR] AA:674 [G] f:50 [TYR] a:682 [G] ❌ 6S0X_a:682 no longer at interface
AF:49 [TYR] AA:675 [A] f:50 [TYR] a:683 [A] ❌ 6S0X_a:683 no longer at interface
AF:53 [LYS] AA:711 [G] f:53 [ASN] a:719 [G] ❌ 6S0X_f:53, 6S0X_a:719 no longer at interface
AF:51 [ILE] AA:674 [G] f:51 [GLU] a:682 [G] ❌ 6S0X_a:682 no longer at interface
AF:1 [MET] AA:740 [U] f:2 [ARG] a:748 [U] ❌ 4YBB_AF:1, 4YBB_AA:740 no longer at interface
AF:75 [GLU] AA:670 [G] f:77 [GLN] a:678 [A] ❌ 4YBB_AA:670 no longer at interface
AF:71 [ILE] AA:737 [C] f:73 [THR] a:745 [U] ❌ 6S0X_f:73 no longer at interface
AF:68 [GLN] AA:738 [C] f:70 [ASN] a:746 [U] ❌ 6S0X_f:70 no longer at interface
AF:68 [GLN] AA:739 [C] f:70 [ASN] a:747 [C] ❌ 6S0X_f:70 no longer at interface
AF:2 [ARG] AA:737 [C] f:3 [THR] a:745 [U] ❌ 6S0X_f:3 no longer at interface
AF:2 [ARG] AA:738 [C] f:3 [THR] a:746 [U] ❌ 6S0X_f:3 no longer at interface
AF:2 [ARG] AA:739 [C] f:3 [THR] a:747 [C] ❌ 6S0X_f:3 no longer at interface
AF:53 [LYS] AA:710 [G] f:53 [ASN] a:718 [G] ❌ 6S0X_f:53 no longer at interface
AF:4 [TYR] AA:737 [C] f:5 [GLU] a:745 [U] ❌ 6S0X_f:5 no longer at interface
AF:4 [TYR] AA:738 [C] f:5 [GLU] a:746 [U] ❌ 6S0X_f:5 no longer at interface
AF:1 [MET] AA:738 [C] f:2 [ARG] a:746 [U] ❌ 4YBB_AF:1 no longer at interface
AF:1 [MET] AA:739 [C] f:2 [ARG] a:747 [C] ❌ 4YBB_AF:1 no longer at interface
AF:3 [HIS] AA:738 [C] f:4 [TYR] a:746 [U] ❌ 4YBB_AF:3 no longer at interface
AF:52 [ASN] AA:673 [A] f:52 [ILE] a:681 [G] ❌ 4YBB_AF:52 no longer at interface
AF:85 [ILE] AA:673 [A] f:87 [ILE] a:681 [G] ❌ 4YBB_AF:85 no longer at interface
AF:85 [ILE] AA:672 [U] f:87 [ILE] a:680 [U] ❌ 4YBB_AF:85 no longer at interface
AF:87 [SER] AA:673 [A] f:88 [ARG] a:681 [G] ❌ 4YBB_AF:87 no longer at interface
AF:87 [SER] AA:671 [G] f:88 [ARG] a:679 [G] ❌ 4YBB_AF:87 no longer at interface
AF:87 [SER] AA:672 [U] f:88 [ARG] a:680 [U] ❌ 4YBB_AF:87 no longer at interface
AF:92 [THR] AA:738 [C] f:93 [ARG] a:746 [U] ❌ 4YBB_AF:92 no longer at interface
AF:92 [THR] AA:737 [C] f:93 [ARG] a:745 [U] ❌ 4YBB_AF:92 no longer at interface
AF:92 [THR] AA:739 [C] f:93 [ARG] a:747 [C] ❌ 4YBB_AF:92 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S6 Bacterial small subunit ribosomal RNA 0.96 3.66 0.07 0.74 0.96 0.57 0.8 0.21 0.13 0.00 0.76


Other pairs involving 4YBB_AF_AA or 6S0X_f_a

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1f_1a 4YBB_AF_AA 0.70 0.96 3.45 0.5 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
4Y4O_1f_1a 6S0X_f_a 0.36 0.95 1.68 0.43 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
6S0X_f_a 7RYG_f_a 0.22 0.96 3.21 0.08 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
6S0X_f_a 7K00_F_A 0.39 0.95 2.53 0.4 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
4YBB_AF_AA 7K00_F_A 0.91 0.98 2.9 0.88 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
4YBB_AF_AA 7RYG_f_a 0.85 0.97 2.25 0.67 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
4YBB_AF_AA 6S0X_f_a 0.21 0.96 3.66 0.07 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare