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All interfaces > All interologs > Interface groups > group85 > 6S0X_f_a

Interface analysis

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Protein

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

6S0X_f
6S0X_a
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
f:2 [ARG] a:746 [U] 4.88 a:676 [A] 64.42
f:2 [ARG] a:747 [C] 2.84 a:675 [G] 64.42
f:2 [ARG] a:748 [U] 4.24 a:674 [G] 64.42
f:4 [TYR] a:746 [U] 4.7 a:676 [A] 98.86
f:50 [TYR] a:680 [U] 3.81 a:742 [A] sugar:SC 98.46
f:50 [TYR] a:681 [G] 2.72 a:725 [C] 98.46
f:51 [GLU] a:718 [G] 4.74 a:689 [A] 60.01
f:52 [ILE] a:681 [G] 3.37 a:725 [C] 98.86
f:77 [GLN] a:678 [A] 4.1 a:744 [U] 71.7
f:77 [GLN] a:679 [G] 4.3 a:743 [C] 71.7
f:81 [LYS] a:680 [U] 3.72 a:742 [A] 65.16
f:87 [ILE] a:680 [U] 4.22 a:742 [A] 69.39
f:87 [ILE] a:681 [G] 4.28 a:725 [C] 69.39
f:88 [ARG] a:679 [G] 4.53 a:743 [C] 98.98
f:88 [ARG] a:680 [U] 2.39 a:742 [A] 98.98
f:88 [ARG] a:681 [G] 4.94 a:725 [C] 98.98
f:89 [TYR] a:679 [G] 3.13 a:743 [C] 49.02
f:90 [MET] a:744 [U] 3.52 a:678 [A] 66.32
f:90 [MET] a:745 [U] 4.81 a:677 [A] 66.32
f:91 [VAL] a:744 [U] 3.19 a:678 [A] sugar:BB 65.13
f:91 [VAL] a:745 [U] 3.28 a:677 [A] 65.13
f:92 [ILE] a:744 [U] 5.0 a:678 [A] 73.97
f:92 [ILE] a:745 [U] 4.11 a:677 [A] 73.97
f:93 [ARG] a:745 [U] 4.76 a:677 [A] 65.35
f:93 [ARG] a:746 [U] 3.45 a:676 [A] 65.35
f:93 [ARG] a:747 [C] 3.45 a:675 [G] 65.35

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group85 6S0X_f_a f: 30s ribosomal protein s6, Staphylococcus aureus (natural) a: 16s ribosomal RNA, Staphylococcus aureus (natural) W8TPC6 Ribosomal protein S6 Bacterial small subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 4

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1f_1a 6S0X_f_a 0.36 0.95 1.68 0.43 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
4YBB_AF_AA 6S0X_f_a 0.21 0.96 3.66 0.07 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
6S0X_f_a 7K00_F_A 0.39 0.95 2.53 0.4 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
6S0X_f_a 7RYG_f_a 0.22 0.96 3.21 0.08 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare