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All interfaces > All interologs > Interface groups > group85 > 7K00_F_A

Interface analysis

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Protein

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

7K00_F
7K00_A
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
F:2 [ARG] A:738 [C] 3.62 A:668 [G] 72.12
F:2 [ARG] A:739 [C] 2.45 A:667 [G] 72.12
F:4 [TYR] A:737 [C] 3.95 A:669 [G] 98.65
F:4 [TYR] A:738 [C] 2.79 A:668 [G] 98.65
F:49 [TYR] A:673 [A] 4.06 A:717 [U] 98.65
F:49 [TYR] A:674 [G] 3.43 A:716 [A] 98.65
F:50 [PRO] A:674 [G] 4.61 A:716 [A] 57.62
F:51 [ILE] A:674 [G] 4.28 A:716 [A] 98.77
F:53 [LYS] A:710 [G] 3.94 A:680 [C] 64.76
F:53 [LYS] A:711 [G] 3.36 A:679 [C] 64.76
F:68 [GLN] A:738 [C] 3.48 A:668 [G] 29.72
F:68 [GLN] A:739 [C] 2.86 A:667 [G] 29.72
F:72 [ASP] A:737 [C] 4.75 A:669 [G] 17.8
F:75 [GLU] A:737 [C] 4.92 A:669 [G] 75.77
F:79 [ARG] A:671 [G] 3.45 A:735 [C] sugar:SC 74.21
F:79 [ARG] A:672 [U] 3.61 A:734 [G] 74.21
F:86 [ARG] A:673 [A] 2.94 A:717 [U] 98.67
F:86 [ARG] A:674 [G] 3.04 A:716 [A] 98.67
F:88 [MET] A:735 [C] 3.14 A:671 [G] 65.84
F:88 [MET] A:736 [C] 3.81 A:670 [G] 65.84
F:89 [VAL] A:736 [C] 2.74 A:670 [G] sugar:BB 63.95
F:89 [VAL] A:737 [C] 3.32 A:669 [G] 63.95
F:90 [MET] A:736 [C] 3.68 A:670 [G] 73.17
F:90 [MET] A:737 [C] 3.39 A:669 [G] 73.17
F:91 [ARG] A:736 [C] 4.42 A:670 [G] 66.3
F:91 [ARG] A:737 [C] 2.6 A:669 [G] 66.3
F:91 [ARG] A:738 [C] 3.26 A:668 [G] 66.3
F:93 [LYS] A:662 [U] 4.11 A:743 [A] 57.89
F:93 [LYS] A:663 [A] 3.6 A:742 [G] 57.89

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group85 7K00_F_A F: 30s ribosomal protein s6, Escherichia coli (natural) A: 16s rRNA, Escherichia coli (natural) P02358 Ribosomal protein S6 Bacterial small subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 4

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1f_1a 7K00_F_A 0.79 0.98 1.91 0.56 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
7K00_F_A 7RYG_f_a 0.85 0.93 1.75 0.67 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
6S0X_f_a 7K00_F_A 0.39 0.95 2.53 0.4 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare
4YBB_AF_AA 7K00_F_A 0.91 0.98 2.9 0.88 Ribosomal protein S6 Bacterial small subunit ribosomal RNA compare