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All interfaces > All interologs > Interface groups > group86 > 4Y4O_1h_1a vs 7O7Y_Av_A2

Interface analysis


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Common contacts -

4Y4O_1h
4Y4O_1a
7O7Y_Av
7O7Y_A2
Conserved?
1h:3 [THR] 1a:586 [C] Av:4 [MET] A2:683 [U] ✔
1h:3 [THR] 1a:587 [G] Av:4 [MET] A2:684 [OMG] ✔
1h:3 [THR] 1a:588 [G] Av:4 [MET] A2:685 [G] ✔
1h:3 [THR] 1a:877 [C] Av:4 [MET] A2:1159 [G] ✔
1h:3 [THR] 1a:878 [G] Av:4 [MET] A2:1160 [G] ✔
1h:94 [TYR] 1a:598 [U] Av:80 [ASP] A2:804 [C] ✔
1h:94 [TYR] 1a:599 [C] Av:80 [ASP] A2:805 [U] ✔
1h:130 [GLY] 1a:599 [C] Av:122 [GLY] A2:805 [U] ✔
1h:130 [GLY] 1a:600 [C] Av:122 [GLY] A2:806 [U] ✔
1h:15 [ASN] 1a:826 [C] Av:16 [ASN] A2:1095 [C] ✔
1h:15 [ASN] 1a:827 [U] Av:16 [ASN] A2:1096 [U] ✔
1h:15 [ASN] 1a:874 [G] Av:16 [ASN] A2:1153 [U] ✔
1h:5 [PRO] 1a:588 [G] Av:6 [VAL] A2:685 [G] ✔
1h:5 [PRO] 1a:589 [C] Av:6 [VAL] A2:686 [A] ✔
1h:131 [GLY] 1a:598 [U] Av:123 [GLY] A2:804 [C] ✔
1h:131 [GLY] 1a:599 [C] Av:123 [GLY] A2:805 [U] ✔
1h:115 [SER] 1a:640 [A] Av:107 [SER] A2:861 [G] ✔
1h:115 [SER] 1a:641 [U] Av:107 [SER] A2:862 [A] ✔
1h:115 [SER] 1a:642 [A] Av:107 [SER] A2:863 [A] ✔
1h:11 [THR] 1a:825 [G] Av:12 [LYS] A2:1094 [A] ✔
1h:11 [THR] 1a:826 [C] Av:12 [LYS] A2:1095 [C] ✔
1h:11 [THR] 1a:875 [C] Av:12 [LYS] A2:1154 [C] ✔
1h:14 [ARG] 1a:875 [C] Av:15 [ASN] A2:1154 [C] ✔
1h:19 [VAL] 1a:827 [U] Av:20 [ARG] A2:1096 [U] ✔
1h:19 [VAL] 1a:828 [A] Av:20 [ARG] A2:1097 [G] ✔
1h:19 [VAL] 1a:860 [A] Av:20 [ARG] A2:1140 [C] ✔
1h:21 [LYS] 1a:827 [U] Av:22 [LYS] A2:1096 [U] ✔
1h:21 [LYS] 1a:828 [A] Av:22 [LYS] A2:1097 [G] ✔
1h:88 [LYS] 1a:877 [C] Av:76 [SER] A2:1159 [G] ✔
1h:88 [LYS] 1a:878 [G] Av:76 [SER] A2:1160 [G] ✔
1h:96 [GLY] 1a:599 [C] Av:82 [GLN] A2:805 [U] ✔
1h:96 [GLY] 1a:600 [C] Av:82 [GLN] A2:806 [U] ✔
1h:28 [ALA] 1a:589 [C] Av:30 [CYS] A2:686 [A] ✔
1h:28 [ALA] 1a:590 [C] Av:30 [CYS] A2:687 [PSU] ✔
1h:56 [LYS] 1a:652 [U] Av:57 [ARG] A2:920 [A] ✔
1h:56 [LYS] 1a:653 [A] Av:57 [ARG] A2:921 [A] ✔
1h:29 [SER] 1a:589 [C] Av:31 [SER] A2:686 [A] ✔
1h:29 [SER] 1a:590 [C] Av:31 [SER] A2:687 [PSU] ✔
1h:8 [ASP] 1a:825 [G] Av:9 [ASP] A2:1094 [A] ✔
1h:128 [GLY] 1a:600 [C] Av:120 [HIS] A2:806 [U] ✔
1h:31 [PHE] 1a:590 [C] Av:33 [VAL] A2:687 [PSU] ✔
1h:31 [PHE] 1a:643 [C] Av:33 [VAL] A2:864 [PSU] ✔
1h:132 [GLU] 1a:597 [G] Av:124 [LYS] A2:803 [A] ✔
1h:132 [GLU] 1a:598 [U] Av:124 [LYS] A2:804 [C] ✔
1h:132 [GLU] 1a:642 [A] Av:124 [LYS] A2:863 [A] ✔
1h:132 [GLU] 1a:643 [C] Av:124 [LYS] A2:864 [PSU] ✔
1h:85 [ARG] 1a:877 [C] Av:74 [VAL] A2:1159 [G] ✔
1h:117 [GLY] 1a:642 [A] Av:109 [GLY] A2:863 [A] ✔
1h:4 [ASP] 1a:877 [C] Av:5 [ASN] A2:1159 [G] ✔
1h:95 [VAL] 1a:599 [C] Av:81 [VAL] A2:805 [U] ✔
1h:116 [LYS] 1a:640 [A] Av:108 [ALA] A2:861 [G] ✔
1h:114 [THR] 1a:642 [A] Av:106 [THR] A2:863 [A] ✔
1h:30 [ARG] 1a:589 [C] Av:32 [LYS] A2:686 [A] ✔
1h:30 [ARG] 1a:590 [C] Av:32 [LYS] A2:687 [PSU] ✔
1h:30 [ARG] 1a:591 [U] Av:32 [LYS] A2:688 [C] ✔
1h:91 [ARG] 1a:878 [G] Av:77 [PRO] A2:1160 [G] ✔
1h:2 [LEU] 1a:587 [G] Av:3 [ARG] A2:684 [OMG] ✔
1h:2 [LEU] 1a:588 [G] Av:3 [ARG] A2:685 [G] ✔
1h:2 [LEU] 1a:824 [C] Av:3 [ARG] A2:1093 [G] ✔
1h:2 [LEU] 1a:825 [G] Av:3 [ARG] A2:1094 [A] ✔
1h:97 [VAL] 1a:599 [C] Av:83 [LEU] A2:805 [U] ✔
1h:97 [VAL] 1a:600 [C] Av:83 [LEU] A2:806 [U] ✔
1h:98 [LYS] 1a:600 [C] Av:84 [LYS] A2:806 [U] ✔
1h:113 [SER] 1a:642 [A] Av:105 [THR] A2:863 [A] ✔
1h:113 [SER] 1a:643 [C] Av:105 [THR] A2:864 [PSU] ✔
1h:12 [ARG] 1a:825 [G] Av:13 [SER] A2:1094 [A] ✔
1h:12 [ARG] 1a:826 [C] Av:13 [SER] A2:1095 [C] ✔
1h:92 [ARG] 1a:643 [C] Av:78 [ARG] A2:864 [PSU] ✔
1h:92 [ARG] 1a:644 [G] Av:78 [ARG] A2:865 [A] ✔
1h:7 [ALA] 1a:877 [C] Av:8 [ALA] A2:1159 [G] ✔
1h:118 [VAL] 1a:642 [A] Av:110 [ILE] A2:863 [A] ✔
1h:129 [VAL] 1a:599 [C] Av:121 [THR] A2:805 [U] ✔
1h:129 [VAL] 1a:600 [C] Av:121 [THR] A2:806 [U] ✔
1h:3 [THR] 1a:823 [G] Av:4 [MET] A2:1092 [C] ❌ 7O7Y_Av_A2
1h:94 [TYR] 1a:597 [G] Av:80 [ASP] A2:803 [A] ❌ 7O7Y_Av_A2
1h:94 [TYR] 1a:643 [C] Av:80 [ASP] A2:864 [PSU] ❌ 7O7Y_Av_A2
1h:94 [TYR] 1a:644 [G] Av:80 [ASP] A2:865 [A] ❌ 7O7Y_Av_A2
1h:15 [ASN] 1a:825 [G] Av:16 [ASN] A2:1094 [A] ❌ 7O7Y_Av_A2
1h:15 [ASN] 1a:875 [C] Av:16 [ASN] A2:1154 [C] ❌ 7O7Y_Av_A2
1h:5 [PRO] 1a:587 [G] Av:6 [VAL] A2:684 [OMG] ❌ 7O7Y_Av_A2
1h:131 [GLY] 1a:642 [A] Av:123 [GLY] A2:863 [A] ❌ 7O7Y_Av_A2
1h:115 [SER] 1a:599 [C] Av:107 [SER] A2:805 [U] ❌ 7O7Y_Av_A2
1h:11 [THR] 1a:876 [G] Av:12 [LYS] A2:1158 [G] ❌ 7O7Y_Av_A2
1h:14 [ARG] 1a:876 [G] Av:15 [ASN] A2:1158 [G] ❌ 7O7Y_Av_A2
1h:8 [ASP] 1a:826 [C] Av:9 [ASP] A2:1095 [C] ❌ 7O7Y_Av_A2
1h:8 [ASP] 1a:876 [G] Av:9 [ASP] A2:1158 [G] ❌ 7O7Y_Av_A2
1h:18 [ARG] 1a:860 [A] Av:19 [LYS] A2:1140 [C] ❌ 7O7Y_Av_A2
1h:31 [PHE] 1a:642 [A] Av:33 [VAL] A2:863 [A] ❌ 7O7Y_Av_A2
1h:132 [GLU] 1a:644 [G] Av:124 [LYS] A2:865 [A] ❌ 7O7Y_Av_A2
1h:91 [ARG] 1a:565 [U] Av:77 [PRO] A2:662 [U] ❌ 7O7Y_Av_A2
1h:92 [ARG] 1a:587 [G] Av:78 [ARG] A2:684 [OMG] ❌ 7O7Y_Av_A2
1h:7 [ALA] 1a:876 [G] Av:8 [ALA] A2:1158 [G] ❌ 7O7Y_Av_A2
1h:11 [THR] 1a:874 [G] Av:12 [LYS] A2:1153 [U] ❌ 4Y4O_1h_1a
1h:11 [THR] 1a:877 [C] Av:12 [LYS] A2:1159 [G] ❌ 4Y4O_1h_1a
1h:14 [ARG] 1a:874 [G] Av:15 [ASN] A2:1153 [U] ❌ 4Y4O_1h_1a
1h:18 [ARG] 1a:875 [C] Av:19 [LYS] A2:1154 [C] ❌ 4Y4O_1h_1a
1h:18 [ARG] 1a:874 [G] Av:19 [LYS] A2:1153 [U] ❌ 4Y4O_1h_1a
1h:2 [LEU] 1a:653 [A] Av:3 [ARG] A2:921 [A] ❌ 4Y4O_1h_1a
1h:30 [ARG] 1a:643 [C] Av:32 [LYS] A2:864 [PSU] ❌ 4Y4O_1h_1a
1h:56 [LYS] 1a:589 [C] Av:57 [ARG] A2:686 [A] ❌ 4Y4O_1h_1a
1h:85 [ARG] 1a:876 [G] Av:74 [VAL] A2:1158 [G] ❌ 4Y4O_1h_1a
1h:88 [LYS] 1a:876 [G] Av:76 [SER] A2:1158 [G] ❌ 4Y4O_1h_1a
1h:91 [ARG] 1a:876 [G] Av:77 [PRO] A2:1158 [G] ❌ 4Y4O_1h_1a
1h:8 [ASP] 1a:824 [C] Av:9 [ASP] A2:1093 [G] ❌ 4Y4O_1h_1a
1h:115 [SER] 1a:639 [G] Av:107 [SER] A2:860 [G] ❌ 7O7Y_A2:860 no longer at interface
1h:19 [VAL] 1a:859 [A] Av:20 [ARG] A2:1138 [U] ❌ 7O7Y_A2:1138 no longer at interface
1h:91 [ARG] 1a:564 [C] Av:77 [PRO] A2:661 [C] ❌ 7O7Y_A2:661 no longer at interface
1h:98 [LYS] 1a:631 [G] Av:84 [LYS] A2:851 [C] ❌ 7O7Y_A2:851 no longer at interface
1h:98 [LYS] 1a:632 [A] Av:84 [LYS] A2:853 [G] ❌ 7O7Y_A2:853 no longer at interface
1h:128 [GLY] 1a:601 [C] Av:120 [HIS] A2:807 [U] ❌ 4Y4O_1a:601 no longer at interface
1h:15 [ASN] 1a:873 [A] Av:16 [ASN] A2:1152 [G] ❌ 4Y4O_1a:873 no longer at interface
1h:27 [PRO] 1a:654 [G] Av:28 [ARG] A2:923 [A] ❌ 4Y4O_1h:27, 4Y4O_1a:654 no longer at interface
1h:2 [LEU] 1a:654 [G] Av:3 [ARG] A2:923 [A] ❌ 4Y4O_1a:654 no longer at interface
1h:3 [THR] 1a:756 [C] Av:4 [MET] A2:1025 [A] ❌ 4Y4O_1a:756 no longer at interface
1h:3 [THR] 1a:755 [G] Av:4 [MET] A2:1024 [A] ❌ 4Y4O_1a:755 no longer at interface
1h:55 [GLY] 1a:651 [C] Av:56 [HIS] A2:919 [U] ❌ 4Y4O_1h:55, 4Y4O_1a:651 no longer at interface
1h:56 [LYS] 1a:651 [C] Av:57 [ARG] A2:919 [U] ❌ 4Y4O_1a:651 no longer at interface
1h:96 [GLY] 1a:633 [G] Av:82 [GLN] A2:854 [C] ❌ 4Y4O_1a:633 no longer at interface
1h:32 [LYS] 1a:589 [C] Av:34 [ILE] A2:686 [A] ❌ 7O7Y_Av:34 no longer at interface
1h:57 [PRO] 1a:653 [A] Av:59 [GLY] A2:921 [A] ❌ 7O7Y_Av:59 no longer at interface
1h:99 [GLU] 1a:599 [C] Av:85 [ASP] A2:805 [U] ❌ 7O7Y_Av:85 no longer at interface
1h:27 [PRO] 1a:826 [C] Av:28 [ARG] A2:1095 [C] ❌ 4Y4O_1h:27 no longer at interface
1h:27 [PRO] 1a:825 [G] Av:28 [ARG] A2:1094 [A] ❌ 4Y4O_1h:27 no longer at interface
1h:55 [GLY] 1a:652 [U] Av:56 [HIS] A2:920 [A] ❌ 4Y4O_1h:55 no longer at interface
1h:82 [HIS] 1a:875 [C] Av:71 [LYS] A2:1154 [C] ❌ 4Y4O_1h:82 no longer at interface
1h:86 [ILE] 1a:876 [G] Av:75 [ILE] A2:1158 [G] ❌ 4Y4O_1h:86 no longer at interface
1h:93 [VAL] 1a:876 [G] Av:79 [PHE] A2:1158 [G] ❌ 4Y4O_1h:93 no longer at interface
1h:101 [PRO] 1a:876 [G] Av:89 [TRP] A2:1158 [G] ❌ 4Y4O_1h:101 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S8, N-terminal domain & Ribosomal protein S8, C-terminal domain 0.93 1.74 0.24 0.85 0.93 0.83 0.79 0.70 0.63 0.23 0.44


Other pairs involving 4Y4O_1h_1a or 7O7Y_Av_A2

Total number of entries: 6

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1h_1a 6S0X_h_a 0.71 0.95 2.68 0.61 Ribosomal protein S8, N-terminal domain & Ribosomal protein S8, C-terminal domain Bacterial small subunit ribosomal RNA compare
4Y4O_1h_1a 7K00_H_A 0.84 0.98 0.94 0.46 Ribosomal protein S8, N-terminal domain & Ribosomal protein S8, C-terminal domain Bacterial small subunit ribosomal RNA compare
7K00_H_A 7O7Y_Av_A2 0.74 0.92 1.89 0.22 Ribosomal protein S8, N-terminal domain & Ribosomal protein S8, C-terminal domain compare
6S0X_h_a 7O7Y_Av_A2 0.64 0.9 3.15 0.21 Ribosomal protein S8, N-terminal domain & Ribosomal protein S8, C-terminal domain compare
4Y4O_1h_1a 7O7Y_Av_A2 0.70 0.93 1.74 0.24 Ribosomal protein S8, N-terminal domain & Ribosomal protein S8, C-terminal domain compare
4Y4O_1h_1a 7RYG_h_a 0.82 0.91 1.63 0.58 Ribosomal protein S8, N-terminal domain & Ribosomal protein S8, C-terminal domain Bacterial small subunit ribosomal RNA compare