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All interfaces > All interologs > Interface groups > group87 > 6S0X_j_a vs 7O7Y_At_A2

Interface analysis


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Licorice
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RNA

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Licorice
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Common contacts -

6S0X_j
6S0X_a
7O7Y_At
7O7Y_A2
Conserved?
j:54 [ALA] a:1070 [U] At:68 [THR] A2:1337 [C] ✔
j:60 [ASP] a:979 [C] At:75 [LYS] A2:1253 [C] ✔
j:55 [VAL] a:1069 [G] At:69 [PRO] A2:1336 [G] ✔
j:55 [VAL] a:1070 [U] At:69 [PRO] A2:1337 [C] ✔
j:55 [VAL] a:1208 [A] At:69 [PRO] A2:1492 [G] ✔
j:55 [VAL] a:1209 [U] At:69 [PRO] A2:1493 [U] ✔
j:55 [VAL] a:1212 [U] At:69 [PRO] A2:1496 [G] ✔
j:39 [PRO] a:1134 [A] At:53 [PRO] A2:1402 [A] ✔
j:57 [LYS] a:981 [C] At:71 [GLY] A2:1255 [C] ✔
j:57 [LYS] a:982 [G] At:71 [GLY] A2:1256 [G] ✔
j:50 [THR] a:1377 [U] At:64 [THR] A2:1669 [U] ✔
j:53 [ARG] a:1070 [U] At:67 [LYS] A2:1337 [C] ✔
j:53 [ARG] a:1072 [G] At:67 [LYS] A2:1339 [G] ✔
j:44 [THR] a:1162 [A] At:58 [THR] A2:1447 [A] ✔
j:61 [SER] a:1072 [G] At:76 [THR] A2:1339 [G] ✔
j:15 [HIS] a:1163 [G] At:29 [VAL] A2:1448 [OMG] ✔
j:9 [ARG] a:1137 [U] At:23 [THR] A2:1405 [U] ✔
j:40 [ILE] a:1134 [A] At:54 [VAL] A2:1402 [A] ✔
j:40 [ILE] a:1135 [G] At:54 [VAL] A2:1403 [A] ✔
j:71 [LYS] a:1289 [A] At:86 [LYS] A2:1580 [A] ✔
j:71 [LYS] a:1290 [A] At:86 [LYS] A2:1581 [A] ✔
j:19 [ASP] a:1163 [G] At:33 [GLU] A2:1448 [OMG] ✔
j:41 [PRO] a:1161 [A] At:55 [ARG] A2:1446 [PSU] ✔
j:41 [PRO] a:1162 [A] At:55 [ARG] A2:1447 [A] ✔
j:52 [ILE] a:982 [G] At:66 [ARG] A2:1256 [G] ✔
j:52 [ILE] a:983 [A] At:66 [ARG] A2:1257 [G] ✔
j:59 [LYS] a:978 [A] At:74 [SER] A2:1252 [A] ✔
j:73 [LEU] a:1137 [U] At:88 [LEU] A2:1405 [U] ✔
j:7 [ARG] a:1136 [U] At:21 [ARG] A2:1404 [C] ✔
j:7 [ARG] a:1137 [U] At:21 [ARG] A2:1405 [U] ✔
j:56 [HIS] a:982 [G] At:70 [CYS] A2:1256 [G] ✔
j:56 [HIS] a:1208 [A] At:70 [CYS] A2:1492 [G] ✔
j:56 [HIS] a:1209 [U] At:70 [CYS] A2:1493 [U] ✔
j:56 [HIS] a:1212 [U] At:70 [CYS] A2:1496 [G] ✔
j:58 [TYR] a:977 [A] At:72 [GLU] A2:1251 [A] ✔
j:58 [TYR] a:978 [A] At:72 [GLU] A2:1252 [A] ✔
j:58 [TYR] a:1072 [G] At:72 [GLU] A2:1339 [G] ✔
j:58 [TYR] a:1207 [A] At:72 [GLU] A2:1491 [OMG] ✔
j:58 [TYR] a:1208 [A] At:72 [GLU] A2:1492 [G] ✔
j:68 [ARG] a:1125 [C] At:83 [ARG] A2:1392 [OMC] ✔
j:43 [PRO] a:1161 [A] At:57 [PRO] A2:1446 [PSU] ✔
j:43 [PRO] a:1162 [A] At:57 [PRO] A2:1447 [A] ✔
j:43 [PRO] a:1290 [A] At:57 [PRO] A2:1581 [A] ✔
j:38 [GLY] a:1134 [A] At:52 [GLY] A2:1402 [A] ✔
j:38 [GLY] a:1135 [G] At:52 [GLY] A2:1403 [A] ✔
j:62 [ARG] a:1376 [C] At:77 [TRP] A2:1668 [U] ✔
j:62 [ARG] a:1377 [U] At:77 [TRP] A2:1669 [U] ✔
j:42 [LEU] a:1161 [A] At:56 [MET] A2:1446 [PSU] ✔
j:42 [LEU] a:1162 [A] At:56 [MET] A2:1447 [A] ✔
j:42 [LEU] a:1290 [A] At:56 [MET] A2:1581 [A] ✔
j:37 [SER] a:1134 [A] At:51 [LYS] A2:1402 [A] ✔
j:37 [SER] a:1135 [G] At:51 [LYS] A2:1403 [A] ✔
j:72 [ARG] a:1162 [A] At:87 [ARG] A2:1447 [A] ✔
j:48 [VAL] a:1377 [U] At:62 [ARG] A2:1669 [U] ❌ 7O7Y_At_A2
j:48 [VAL] a:1378 [A] At:62 [ARG] A2:1670 [G] ❌ 7O7Y_At_A2
j:60 [ASP] a:977 [A] At:75 [LYS] A2:1251 [A] ❌ 7O7Y_At_A2
j:60 [ASP] a:1072 [G] At:75 [LYS] A2:1339 [G] ❌ 7O7Y_At_A2
j:39 [PRO] a:1133 [U] At:53 [PRO] A2:1401 [U] ❌ 7O7Y_At_A2
j:39 [PRO] a:1162 [A] At:53 [PRO] A2:1447 [A] ❌ 7O7Y_At_A2
j:57 [LYS] a:973 [A] At:71 [GLY] A2:1247 [A] ❌ 7O7Y_At_A2
j:57 [LYS] a:978 [A] At:71 [GLY] A2:1252 [A] ❌ 7O7Y_At_A2
j:57 [LYS] a:1207 [A] At:71 [GLY] A2:1491 [OMG] ❌ 7O7Y_At_A2
j:57 [LYS] a:1208 [A] At:71 [GLY] A2:1492 [G] ❌ 7O7Y_At_A2
j:15 [HIS] a:1162 [A] At:29 [VAL] A2:1447 [A] ❌ 7O7Y_At_A2
j:9 [ARG] a:1289 [A] At:23 [THR] A2:1580 [A] ❌ 7O7Y_At_A2
j:9 [ARG] a:1290 [A] At:23 [THR] A2:1581 [A] ❌ 7O7Y_At_A2
j:40 [ILE] a:1136 [U] At:54 [VAL] A2:1404 [C] ❌ 7O7Y_At_A2
j:40 [ILE] a:1161 [A] At:54 [VAL] A2:1446 [PSU] ❌ 7O7Y_At_A2
j:59 [LYS] a:981 [C] At:74 [SER] A2:1255 [C] ❌ 7O7Y_At_A2
j:59 [LYS] a:982 [G] At:74 [SER] A2:1256 [G] ❌ 7O7Y_At_A2
j:73 [LEU] a:1136 [U] At:88 [LEU] A2:1404 [C] ❌ 7O7Y_At_A2
j:73 [LEU] a:1290 [A] At:88 [LEU] A2:1581 [A] ❌ 7O7Y_At_A2
j:56 [HIS] a:972 [G] At:70 [CYS] A2:1246 [G] ❌ 7O7Y_At_A2
j:45 [GLU] a:1264 [G] At:59 [LYS] A2:1550 [U] ❌ 7O7Y_At_A2
j:37 [SER] a:1136 [U] At:51 [LYS] A2:1404 [C] ❌ 7O7Y_At_A2
j:41 [PRO] a:1133 [U] At:55 [ARG] A2:1401 [U] ❌ 6S0X_j_a
j:41 [PRO] a:1163 [G] At:55 [ARG] A2:1448 [OMG] ❌ 6S0X_j_a
j:41 [PRO] a:1290 [A] At:55 [ARG] A2:1581 [A] ❌ 6S0X_j_a
j:42 [LEU] a:1137 [U] At:56 [MET] A2:1405 [U] ❌ 6S0X_j_a
j:44 [THR] a:1161 [A] At:58 [THR] A2:1446 [PSU] ❌ 6S0X_j_a
j:44 [THR] a:1163 [G] At:58 [THR] A2:1448 [OMG] ❌ 6S0X_j_a
j:45 [GLU] a:1290 [A] At:59 [LYS] A2:1581 [A] ❌ 6S0X_j_a
j:48 [VAL] a:1264 [G] At:62 [ARG] A2:1550 [U] ❌ 6S0X_j_a
j:50 [THR] a:983 [A] At:64 [THR] A2:1257 [G] ❌ 6S0X_j_a
j:52 [ILE] a:981 [C] At:66 [ARG] A2:1255 [C] ❌ 6S0X_j_a
j:54 [ALA] a:1208 [A] At:68 [THR] A2:1492 [G] ❌ 6S0X_j_a
j:55 [VAL] a:982 [G] At:69 [PRO] A2:1256 [G] ❌ 6S0X_j_a
j:57 [LYS] a:972 [G] At:71 [GLY] A2:1246 [G] ❌ 6S0X_j_a
j:58 [TYR] a:981 [C] At:72 [GLU] A2:1255 [C] ❌ 6S0X_j_a
j:58 [TYR] a:973 [A] At:72 [GLU] A2:1247 [A] ❌ 6S0X_j_a
j:59 [LYS] a:977 [A] At:74 [SER] A2:1251 [A] ❌ 6S0X_j_a
j:59 [LYS] a:1072 [G] At:74 [SER] A2:1339 [G] ❌ 6S0X_j_a
j:60 [ASP] a:978 [A] At:75 [LYS] A2:1252 [A] ❌ 6S0X_j_a
j:60 [ASP] a:981 [C] At:75 [LYS] A2:1255 [C] ❌ 6S0X_j_a
j:62 [ARG] a:983 [A] At:77 [TRP] A2:1257 [G] ❌ 6S0X_j_a
j:71 [LYS] a:1137 [U] At:86 [LYS] A2:1405 [U] ❌ 6S0X_j_a
j:72 [ARG] a:1163 [G] At:87 [ARG] A2:1448 [OMG] ❌ 6S0X_j_a
j:57 [LYS] a:974 [A] At:71 [GLY] A2:1248 [C] ❌ 7O7Y_A2:1248 no longer at interface
j:50 [THR] a:984 [A] At:64 [THR] A2:1258 [G] ❌ 7O7Y_A2:1258 no longer at interface
j:56 [HIS] a:1211 [A] At:70 [CYS] A2:1495 [U] ❌ 7O7Y_A2:1495 no longer at interface
j:15 [HIS] a:1164 [U] At:29 [VAL] A2:1449 [A] ❌ 6S0X_a:1164 no longer at interface
j:16 [ARG] a:1164 [U] At:30 [LYS] A2:1449 [A] ❌ 6S0X_j:16, 6S0X_a:1164 no longer at interface
j:46 [LYS] a:1263 [G] At:60 [THR] A2:1549 [G] ❌ 6S0X_j:46, 6S0X_a:1263 no longer at interface
j:53 [ARG] a:1199 [U] At:67 [LYS] A2:1483 [C] ❌ 6S0X_a:1199 no longer at interface
j:59 [LYS] a:1073 [U] At:74 [SER] A2:1340 [U] ❌ 6S0X_a:1073 no longer at interface
j:63 [GLU] a:1199 [U] At:78 [ASP] A2:1483 [C] ❌ 6S0X_j:63, 6S0X_a:1199 no longer at interface
j:64 [GLN] a:1197 [G] At:79 [ARG] A2:1481 [A] ❌ 6S0X_j:64, 6S0X_a:1197 no longer at interface
j:64 [GLN] a:1198 [A] At:79 [ARG] A2:1482 [G] ❌ 6S0X_j:64, 6S0X_a:1198 no longer at interface
j:68 [ARG] a:1126 [U] At:83 [ARG] A2:1393 [U] ❌ 6S0X_a:1126 no longer at interface
j:71 [LYS] a:1291 [U] At:86 [LYS] A2:1582 [C] ❌ 6S0X_a:1291 no longer at interface
j:36 [VAL] a:1135 [G] At:50 [VAL] A2:1403 [A] ❌ 6S0X_j:36 no longer at interface
j:46 [LYS] a:1264 [G] At:60 [THR] A2:1550 [U] ❌ 6S0X_j:46 no longer at interface
j:47 [SER] a:1264 [G] At:61 [LEU] A2:1550 [U] ❌ 6S0X_j:47 no longer at interface
j:49 [TYR] a:983 [A] At:63 [ILE] A2:1257 [G] ❌ 6S0X_j:49 no longer at interface
j:51 [ILE] a:983 [A] At:65 [THR] A2:1257 [G] ❌ 6S0X_j:51 no longer at interface
j:64 [GLN] a:1378 [A] At:79 [ARG] A2:1670 [G] ❌ 6S0X_j:64 no longer at interface
j:64 [GLN] a:1377 [U] At:79 [ARG] A2:1669 [U] ❌ 6S0X_j:64 no longer at interface
j:66 [GLU] a:1125 [C] At:81 [GLN] A2:1392 [OMC] ❌ 6S0X_j:66 no longer at interface
j:70 [HIS] a:1163 [G] At:85 [HIS] A2:1448 [OMG] ❌ 6S0X_j:70 no longer at interface
j:70 [HIS] a:1162 [A] At:85 [HIS] A2:1447 [A] ❌ 6S0X_j:70 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S10 0.9 2.76 0.33 0.82 0.89 1.0 0.88 0.54 0.44 0.22 0.34


Other pairs involving 6S0X_j_a or 7O7Y_At_A2

Total number of entries: 6

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1j_1a 6S0X_j_a 0.67 0.95 2.77 0.53 Ribosomal protein S10 Bacterial small subunit ribosomal RNA compare
4Y4O_1j_1a 7O7Y_At_A2 0.55 0.93 1.91 0.35 Ribosomal protein S10 compare
6S0X_j_a 7RYG_j_a 0.60 0.96 3.17 0.57 Ribosomal protein S10 Bacterial small subunit ribosomal RNA compare
6S0X_j_a 7O7Y_At_A2 0.54 0.9 2.76 0.33 Ribosomal protein S10 compare
6S0X_j_a 7K00_J_A 0.73 0.96 2.98 0.62 Ribosomal protein S10 Bacterial small subunit ribosomal RNA compare
7K00_J_A 7O7Y_At_A2 0.60 0.92 1.86 0.38 Ribosomal protein S10 compare